New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =94 (0.550)67 (0.440) 54/270 NT 46.5% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 70 (0.460)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 274 total aligned reads displayed.

AACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGC‑ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACT  >  NC_000913/1207521‑1208061
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                
       agccgatccagcttccagacaaccagagtgtcacctgccgataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaaagTTGG‑TTTGGga                                                                                                                                                                                                                                                                       <  4:91130‑M1/11‑1 (MQ=255)
                    tCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGC‑ATCCGGTGCCAGCCTGGAGAAGGGGCGGCCCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTCAAGCCGCAAGAATCCGTTTCGCGATATCAAATAGGAGTGCACTGTTCAAACGGCTCACGAAAACCTTGG‑TGTGGGCGACGGACCAAAACt                                                                                                                                                                                                                                                         >  4:173740/1‑274 (MQ=17)
                        cgcgGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGC‑ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacct                                                                                                                                                                                                                                                     >  2:263729‑M1/1‑261 (MQ=255)
                                 agtgtcacctgccgataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgtcatttgcttgttatttcttcattttcataaacgTTGGGTTTGGGAGAAGGAGCAAAACTCAATgcagca                                                                                                                                                                                                                                               >  2:128029‑M1/238‑273 (MQ=255)
                                                   tgtcctgagcagttttttcagtaccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGc                                                                                                                                                                                                                             >  2:473038‑M1/220‑272 (MQ=255)
                                                                       cTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGC‑ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTCCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCATTGTGCAAACGGCTCTCGAAAACCT                                                                                                                                                                                                                                                                                  >  2:491557‑M1/1‑199 (MQ=255)
                                                                                                  ttGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGTGGC‑ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCAGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTa                                                                                                                                                                          <  1:138430/275‑1 (MQ=255)
                                                                                                    atcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTCTGATTGGTGGTATTGAGCAATCAGTaa                                                                                                                                                                         <  1:152283‑M1/105‑1 (MQ=255)
                                                                                                      aatGTTGCAGGAGGAACTGTGTAGCGTGGTGGAGGCGATAAGGT‑ACAGCGTGGAGAAGGGGCGGCACGACCAATTACGTACCGAAATTGGCGCGCTGCTGTTAAGCCCAAAGACGCAGGTTGGCGATATGAAATCGGATGGCACTGTGCAAACGGCTCTCGACAACCTTGG‑TTTGGGAAAAGGctctgaattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctg                                                                                                                                                                      <  4:186590‑M1/274‑93 (MQ=255)
                                                                                                                           cAGCGTGGTGGAGGC‑ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTT                                                                                                                                                                                                                                                                                 <  6:872630‑M1/148‑1 (MQ=255)
                                                                                                                             atcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTgg                                                                                                                                                                                                                                                                               <  7:251890‑M1/4‑1 (MQ=255)
                                                                                                                               ggggtggAGGC‑ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGAACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa                                                                                                                                              <  2:619776/272‑1 (MQ=255)
                                                                                                                                tggtggAGGC‑ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaaa                                                                                                                                            >  2:226564/1‑275 (MQ=255)
                                                                                                                                ctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑ttt                                                                                                                                                                                                                                                                           >  8:700092‑M1/143‑149 (MQ=255)
                                                                                                                                  gcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTgg                                                                                                                                                                                                                                                                         >  7:178070‑M1/141‑149 (MQ=255)
                                                                                                                                     gAGGC‑ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGA                                                                                                                                                                                                                                                                     >  8:645055‑M1/1‑149 (MQ=255)
                                                                                                                                       gttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGgaga                                                                                                                                                                                                                                                                     >  6:445933‑M1/136‑148 (MQ=255)
                                                                                                                                       agggtgccGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc                                                                                                                                       <  2:672974/268‑1 (MQ=255)
                                                                                                                                         c‑ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGG                                                                                                                                                                                                                                                                  <  6:736791‑M1/148‑1 (MQ=255)
                                                                                                                                           agcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGa                                                                                                                                                                                                                                                                 >  6:368190‑M1/132‑148 (MQ=255)
                                                                                                                                           aTCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggcactggcaaaggctt                                                                                                                                           >  2:519724‑M1/1‑147 (MQ=255)
                                                                                                                                           aTCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGA                                                                                                                                                                                                                                                                       <  5:561519‑M1/142‑1 (MQ=255)
                                                                                                                                                gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCaaaa                                                                                                                                                                                                                                                           <  7:393463/149‑1 (MQ=255)
                                                                                                                                                 tGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgca                                                                                                                                                                                                                                                           >  5:51230‑M1/1‑141 (MQ=255)
                                                                                                                                                   ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcatt                                                                                                                                                                                                                                                         <  5:324309‑M1/148‑10 (MQ=255)
                                                                                                                                                   ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTc                                                                                                                                                                                                                                                        >  7:494400/1‑149 (MQ=255)
                                                                                                                                                        cTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACt                                                                                                                                                                                                                                                         <  7:344038/143‑1 (MQ=255)
                                                                                                                                                        cTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACt                                                                                                                                                                                                                                                         >  8:344038/1‑143 (MQ=255)
                                                                                                                                                         tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                                                                                                                                   <  5:696164/148‑1 (MQ=255)
                                                                                                                                                          agatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTc                                                                                                                                                                                                                                                        <  2:345352‑M1/26‑1 (MQ=255)
                                                                                                                                                              aaGGGGCGGGACGACCAGTTACTTACCGAACTTCGCGGGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATa                                                                                                                <  2:600733/274‑1 (MQ=255)
                                                                                                                                                              aaGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                                                                                                                                                                                                             <  8:494400/149‑1 (MQ=255)
                                                                                                                                                                 tgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTgg                                                                                                                                                                                                                                                                         <  2:723306‑M1/9‑1 (MQ=255)
                                                                                                                                                                 gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                                                                                                                                                          <  7:324542/149‑1 (MQ=255)
                                                                                                                                                                 gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                                                                                                                                                          <  7:452574/149‑1 (MQ=255)
                                                                                                                                                                 gggCGGAACGACCAGTTACTTGCCGAAATACGAGCGCTGCTGTTAATCCGAAAGAATCCGGTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAg                                                                                                             <  4:530839/274‑1 (MQ=255)
                                                                                                                                                                   ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑ttt                                                                                                                                                                                                                                                                           <  7:292056‑M1/7‑1 (MQ=255)
                                                                                                                                                                   ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑ttt                                                                                                                                                                                                                                                                           >  8:292056‑M1/108‑114 (MQ=255)
                                                                                                                                                                     ggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTa                                                                                                        >  2:416792/1‑275 (MQ=255)
                                                                                                                                                                     ctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGgaga                                                                                                                                                                                                                                                                     >  4:723304‑M1/106‑118 (MQ=255)
                                                                                                                                                                             ttgttgatacgcgtagatagacaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc                                                                                                                                                                                                                               <  6:475549‑M1/51‑1 (MQ=255)
                                                                                                                                                                               gTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctt                                                                                                                                                                                                                            <  7:645055‑M1/149‑39 (MQ=255)
                                                                                                                                                                                  acttacCGCACTTCGCGCGCGTCGGTTAAGCCGAAAGAATCCGTTTGGCAATATCAAATCGGAGGGCACTGTGCAAACGGCTCTCGAAAACCTGGG‑TTTGGGAGAAGGctctgcattacctgttggtgtccgggttcgggggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggct                                                                                           <  4:404495‑M1/275‑168 (MQ=255)
                                                                                                                                                                                     acgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt                                                                                                                                                                                                                       <  5:739604‑M1/59‑1 (MQ=255)
                                                                                                                                                                                      acCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctg                                                                                                                                                                                                      >  3:129554‑M1/1‑104 (MQ=255)
                                                                                                                                                                                        cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                                                                                                                                    >  5:888536/1‑148 (MQ=255)
                                                                                                                                                                                         gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactc                                                                                                                                                                                                                   >  5:12545‑M1/1‑101 (MQ=255)
                                                                                                                                                                                          cACTTCGCGCGCTGCTGTTAAGCCGCGAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCGCGAAAACGTTGG‑TTTGGGAGAAGGAGCAAAAATCAATGCAGCACAGGCACCATTAGGACGCACCGGCTTCATAGCTATAACGAGTAGGATTGGTAGTATTGAGCAGTCAGTAATACTTCAGAGGAGGTGGAATGCCGCAACAGCAGCTGCCTCTGGGGGGGCTGGAAATACGTTTGCATTCCAGGTTGCGGTTaataat                                                                                   >  4:114562/1‑275 (MQ=255)
                                                                                                                                                                                          cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattagtggctgggatgat                                                                                   >  2:576067‑M1/1‑100 (MQ=255)
                                                                                                                                                                                          cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatcc                                                                                                                                       <  2:99503‑M1/223‑124 (MQ=255)
                                                                                                                                                                                          cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGCTTGGCGATATCACATCGGATGGCACTGTGCAAACGGCTCCCGAAAACCTTGG‑TTTGGGAGAAGGctcttcattacctgttgctttcccggttccgtggccttcagccactccgccaacaggccggctgaaatgccatggtgcccctttttctgcttcagaatccccgcacctgacaaaggcttacccgacaaatacattgcctgatttacacggtgcgtttattcgttgccggggttac                                                                                   >  4:47911‑M1/1‑100 (MQ=255)
                                                                                                                                                                                             ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGG                                                                                                                                                                                                                                                                        >  1:186158‑M1/1‑91 (MQ=255)
                                                                                                                                                                                                 ggcgctGCTGTGAAGCCGCAAGAATCCGTTTGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAA                                                                                                                                                                                                                                                                    <  3:186157‑M1/90‑1 (MQ=255)
                                                                                                                                                                                                      tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctgg                                                                                                                                                                                                     >  8:857574‑M1/1‑88 (MQ=255)
                                                                                                                                                                                                      aagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                                                                                                                                                      >  5:774191‑M1/73‑148 (MQ=255)
                                                                                                                                                                                                       agcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                                                                                                                                                    >  7:790975‑M1/72‑149 (MQ=255)
                                                                                                                                                                                                           ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                                                                                                                                                >  8:727529/1‑149 (MQ=255)
                                                                                                                                                                                                              aGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                                                                                                                                                             <  7:727529/149‑1 (MQ=255)
                                                                                                                                                                                                               aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                                                                                                                                                          >  2:290126‑M1/64‑103 (MQ=255)
                                                                                                                                                                                                                  gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacagg                                                                                                                                                                                                         >  4:331832‑M1/1‑76 (MQ=255)
                                                                                                                                                                                                                   cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTggtggt                                                                                                                                                                                         >  5:802028/1‑148 (MQ=255)
                                                                                                                                                                                                                     aGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                                                                                                                                       >  6:791490/1‑148 (MQ=255)
                                                                                                                                                                                                                       ctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGTTTATGATTGGTGGTATTg                                                                                                                                                                                     >  5:155938‑M1/56‑148 (MQ=255)
                                                                                                                                                                                                                       aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                     >  6:56926/1‑148 (MQ=255)
                                                                                                                                                                                                                        aTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                                                                                                                                                   <  8:434314/149‑1 (MQ=255)
                                                                                                                                                                                                                         ggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                                                                                                                                   <  1:30420‑M1/31‑1 (MQ=255)
                                                                                                                                                                                                                          ccGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGc                                                                                                                                                                                  <  6:914354/148‑1 (MQ=255)
                                                                                                                                                                                                                            gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                                                                                                                                               >  7:855364/1‑149 (MQ=255)
                                                                                                                                                                                                                              ttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                                                                                                                              <  6:308439/148‑1 (MQ=255)
                                                                                                                                                                                                                              aagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                                                                                                                              <  5:290618‑M1/100‑1 (MQ=255)
                                                                                                                                                                                                                                    gaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc                                                                                                                                                                                                                               <  4:606180‑M1/51‑1 (MQ=255)
                                                                                                                                                                                                                                    gaatgatgccatttgcttgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                     <  7:158795‑M1/93‑1 (MQ=255)
                                                                                                                                                                                                                                     tatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgtgggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgct                                                                                                                                                                       <  6:12545‑M1/148‑92 (MQ=255)
                                                                                                                                                                                                                                      agcaatggggatgggactGTGGAAACGGCTCTCGAAAACCGTGG‑GGTGGGAGAAGGgtctgcattacctgttggtgtcccggttccgtggccttcaggcacttcgccaacaggctggctgaaatgcaatggtgccgctgtttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcag                                         <  4:263728‑M1/265‑218 (MQ=255)
                                                                                                                                                                                                                                       tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAg                                                                                                                                           >  3:202765/1‑174 (MQ=255)
                                                                                                                                                                                                                                        cAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                     <  5:645311/131‑1 (MQ=255)
                                                                                                                                                                                                                                        cAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                     >  6:645311/1‑131 (MQ=255)
                                                                                                                                                                                                                                         aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaaga                                                                                                                                                                  >  8:317351‑M1/1‑53 (MQ=255)
                                                                                                                                                                                                                                         aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCa                                                                                                                                                                  <  8:140403/149‑1 (MQ=255)
                                                                                                                                                                                                                                           aTCGGATGTCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc                                                                                                                                       <  1:202766/174‑1 (MQ=255)
                                                                                                                                                                                                                                                   gCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                     <  6:219988/120‑1 (MQ=255)
                                                                                                                                                                                                                                                   gCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                     >  5:219988/1‑120 (MQ=255)
                                                                                                                                                                                                                                                     tgttatttcttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGa                                                                                                                                                       <  6:518003‑M1/123‑1 (MQ=255)
                                                                                                                                                                                                                                                        tatttcttcattttcataaacgTTGG‑GTTGGGAGAAGGAGCAAAACTTAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATg                                                                                                                                                    <  5:388093‑M1/126‑1 (MQ=255)
                                                                                                                                                                                                                                                         tgCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattg                                                                                                                          <  2:805561‑M1/173‑137 (MQ=255)
                                                                                                                                                                                                                                                           cAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa                                                                                                                                                 <  6:1696‑M1/148‑114 (MQ=255)
                                                                                                                                                                                                                                                             aaCGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCa                                                                                                                                               >  6:597770/1‑148 (MQ=255)
                                                                                                                                                                                                                                                              ttcattttcataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa                                                                                                                                             <  7:896832‑M1/133‑1 (MQ=255)
                                                                                                                                                                                                                                                               cGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa                                                                                                                                             <  5:94125/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                ggCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                                                                                                                                                         >  7:760726/1‑119 (MQ=255)
                                                                                                                                                                                                                                                                  ctctCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                                                                                                                                           <  1:105997/51‑1 (MQ=255)
                                                                                                                                                                                                                                                                   tctcGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt                                                                                                                                        >  8:105502/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                   tctcGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt                                                                                                                                        >  8:18378/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                   tctcGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt                                                                                                                                        <  8:411672/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                      cataaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                                                                                                                                           >  8:23706‑M1/9‑95 (MQ=255)
                                                                                                                                                                                                                                                                       gAAAACCTTGG‑TTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgac                                                                                                                                    >  8:763375‑M1/1‑23 (MQ=255)
                                                                                                                                                                                                                                                                       gAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                                                                                                                                                                                                           <  4:626951/78‑1 (MQ=255)
                                                                                                                                                                                                                                                                        taaacgTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt                                                                                                                                                                                               <  6:818304‑M1/83‑1 (MQ=255)
                                                                                                                                                                                                                                                                         aaaCCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGcc                                                                                                                                   >  6:609861/1‑148 (MQ=255)
                                                                                                                                                                                                                                                                              TTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCTGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTACCTCTggg                                                                                                                             >  8:279977‑M1/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                
AACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGC‑ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG‑TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACT  >  NC_000913/1207521‑1208061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.