| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,608,689 | G→T | 5.3% | intergenic (+40/+62) | zntA → / ← tusA | zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,608,689 | 0 | G | T | 5.3% | 331.7 / 4.5 | 105 | intergenic (+40/+62) | zntA/tusA | zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base G (55/43); new base T (4/2); total (59/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.67e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
CGACGCAGCATTAACCCATAACCACCTGCGCGGCCTGGTGCAAATGATTGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGC > NC_000913/3608418‑3608950 | cgaccacgcaTTACCCCATACCCCCCTGCGCTGCCTGGTGCACATGCTTGCACCTGCCCCCGCCACTCACGCCAATATCCGCCAGTACATCACGATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGGGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGcc < 4:478579/267‑1 (MQ=255)cgACGCCGCACTCACCCATTGCCACATGCGCGGCCTGGGTCCAATGATTGACCTGGCACGCCCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTTGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGccc < 1:81213/275‑1 (MQ=255) aCCCATAACCACCTGCGCGGCCTGGTGCAAATGATTGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑Agg > 2:236254/1‑275 (MQ=255) tAACCACCTGCGCGGCCTGGTGCAAATGATTGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAACCC‑GATCGCAACACTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAg > 1:210826/1‑275 (MQ=255) caccTGCGCGGCCTGGTGCAAATGATTGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCg < 2:278822/250‑1 (MQ=255) tGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGCTTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCCCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCa > 1:79776/1‑274 (MQ=255) gggCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAgg > 2:506526/1‑191 (MQ=255) gCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCctc > 1:56305/1‑173 (MQ=255) tGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGa < 4:506524/191‑1 (MQ=255) aanGGGATCTTCCTCGTCACCACGCTGTTAGGGANGACCGGGTNNTGGCTGGCAGTGCTGGCAGATACNGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTggg < 3:56304/173‑1 (MQ=255) cacGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCct > 6:588417/1‑148 (MQ=255) cacGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAAACAGTTCGTGTTcc > 2:353331/1‑274 (MQ=255) acGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCctct > 7:139364/1‑149 (MQ=255) acGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCctc > 6:432853/1‑148 (MQ=255) cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTggg < 8:816949/149‑1 (MQ=255) gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTgggg > 5:754217/1‑148 (MQ=255) gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGga < 7:265978/149‑1 (MQ=255) ttAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTgg < 8:130433/145‑1 (MQ=255) ttAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTgg > 7:130433/1‑145 (MQ=255) aGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGag‑ag < 7:580578/149‑1 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCTCCTCTGGGGAG‑Agg < 7:67490/149‑1 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGag‑ag < 6:226194/148‑1 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGag‑ag < 5:319121/148‑1 (MQ=255) gATGACCGGGTTGTGGTTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑Aggg > 5:580439/1‑148 (MQ=255) gATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGt > 7:30833/1‑149 (MQ=255) tGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGtt < 6:510813/148‑1 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAgg > 8:112758/1‑149 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAgg < 8:470791/149‑1 (MQ=255) ccGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCATCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGAAACCAGTTCGTGTTACATAAGGGTACAAAAcaaa > 1:204875/1‑272 (MQ=255) cGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAggg < 6:148691/148‑1 (MQ=255) cGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGt < 7:644412/149‑1 (MQ=255) gggTTGTGGCTGGCAGTGCTGGCAGATGCGGGGGCGACGGTGCTGGTGAAAACGAATGCGATAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GAGCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGACAggga > 6:689923/1‑147 (MQ=255) gggTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGt > 6:197909/1‑148 (MQ=255) gTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAg < 7:238879/149‑1 (MQ=255) gTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAg < 7:781725/149‑1 (MQ=255) gTTGTGGCTGGCAGTGCTGGCACATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGCTAGGGTGa < 5:783568/148‑1 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAgg < 7:309811/149‑1 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAgg < 8:785094/149‑1 (MQ=255) ctggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGaaa < 5:805179/148‑1 (MQ=255) ggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAgg < 7:296398/135‑1 (MQ=255) ggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAgg > 8:296398/1‑135 (MQ=255) cTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATc > 7:365480/1‑149 (MQ=255) cAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGaa > 6:737947/1‑148 (MQ=255) taggggggCGAGGGTGCGGGTAACAGCGAAGGCGTAAAGATTGTTGCCACGGAGAAAAGGCAACCG‑GGCAGCAACATTCGGCGCGACCGGCCCCCCCGCCCCTCTGGGGGG‑GGGGTTCGGGTGAGGGAAAAAGGCGGCATCGAAGCCaa < 8:365480/146‑1 (MQ=255) gggCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGCCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATAGCGCGGGTAGTGGCCGGATCGTCGCCg > 1:228888/1‑275 (MQ=255) gggagggtggtGGGGACAGCGAAGGGGTTAAGGTTGTTGCGAGGGAAATAAGGAAAACC‑AACCCAAACATGGAGGGCATACGTTCCCCTCGCCCCGCTGGGGAG‑AGGGTGGGGTTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGccc < 8:895378/144‑1 (MQ=255) cGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGccc > 5:366333/1‑148 (MQ=255) gACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCt > 8:667718/1‑149 (MQ=255) cGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTa > 5:648394/1‑148 (MQ=255) ggTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTaagatcgg > 5:664310/1‑141 (MQ=255) gTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGc > 5:564041/1‑148 (MQ=255) cggaaaaTGGGTTAAGTTCTTTGCGGGGGGGA‑AAGGAAAACCAGATCACAAAATTGAGCGTGATCGGTCCCCTCGCCCCGC‑GGGGAGAAGGGTTGGGCGGGGAGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTa < 7:112758/144‑1 (MQ=255) aGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAACCC‑GATCGGAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGCATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAAAGtttag > 1:72956/1‑272 (MQ=255) aGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCCATCAGCCCCTATCAACCGCCTTTACGAATCAACTCACGATAAGGCAGTCCATCCGTCTCGTCAGCAACCAGTTCGTGTTCCAGAAAGGTACAAAACCCAGGAATATCTCGGGTGGTGGCCGGATCGACGGGGATACACGGCACAGTTTCg > 4:76196/1‑274 (MQ=255) aGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTACCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCaaa > 2:395310/1‑125 (MQ=255) caaaTGCTTTAAGATTGTGGCGAAGGAGAAAAGGAAAACC‑GATCGCAACATTGGGCGCGACCGCCCCCCCCCCCCTTGGGGGGAG‑GGGGTTGGGGTGGGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACg < 5:737947/146‑1 (MQ=255) cGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGcc > 2:709386/1‑274 (MQ=255) cGAACGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCCACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGCCAGGCCATCCGTCTCTTTAGCAACCAGTTCTTGTTCCATAACGTTACAAACCCCAGGAATATAGCGGGTAGTGGCCGGATCGTCGGCGATAATCAAAAAAGttttccc > 1:80825/1‑270 (MQ=255) gAATGCTTTAAGTTTGTGGCGCAGGAGAAAAGGAAACCC‑GACCGAAAAATGGAGCGCGATCGGCCCCCCCGCCCCTCGGGGGAG‑AGGGTTAGGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGa < 5:432853/148‑1 (MQ=255) aaTGCGTTAAGTTTGTTGCGAAGGAAATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGCCCCCCCGCCCCTCTGGGGAG‑GGGGTTAGGGTGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAAt < 8:823348/149‑1 (MQ=255) ttAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAgg < 6:651202/100‑1 (MQ=255) aTTTTTGCGAAGAAAATAAGGCAAACC‑GATCGAAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑GGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGAt < 7:884661/149‑1 (MQ=38) ttgCGCAGGAGATAAGGAAAACG‑GAGCGAAACATTGCGCGCGATCGGCCCCCCCGCCCCTCGGGGGAG‑GGGGTTGGGGGGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAgg < 8:139364/149‑1 (MQ=255) tcgggaaGGAGAAAAGAAAAACC‑AAACAAAATATGGCGCGCGAGCGCCCCCCCCGGCCCTCGGGGGGG‑GGGGTGAGGGTGAGGAGAAAAGGCGGCCTCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAg < 5:831349/142‑1 (MQ=255) gcAGGAAAGAAGGAAAACC‑GATCGAAACATGGAGCGCGATCGGCCCCCTCGCCCCTCGGGGGAG‑AGGGTTGGGGTGGGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGt < 8:30833/149‑1 (MQ=255) tAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGCCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGTGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCATTTACGCATCTAATAACGATAAGGCAGTCCATCCGt > 8:560097/1‑149 (MQ=39) aaGGCAAACC‑GATCGCAACATTGGGCGCGATCGGCCCCCTCGCCCTTCGGGGGAG‑AGGTTTAGGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGt < 5:60639/148‑1 (MQ=255) cAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTGGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTctct < 6:754217/148‑1 (MQ=255) aaaCG‑GATCGAAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGCG‑AGGGTTAGGGGGAGGTGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACGGCCTTACCGAATCAAATAAAGATAAAGCAGTCCANCCGGCTCTTTCGAAAGCAGTTCGTGTTCAACACAGATACAGAACCCAGGAAAAGCGAGGGTAGAGGACGGAAGANCGGCGACAAACAGCAGCATTTCCGCACGATNNATATTGCGGCCGGGGTTGGGCAcccacac > 3:101161/1‑270 (MQ=255) aaCC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt > 5:458674/1‑148 (MQ=255) aaCC‑GATCGAAACATTGAGCGGGATCGGCCCCCCCGCCCCTCGGGGGGG‑GGGGTTAGGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt < 6:366333/148‑1 (MQ=255) ccc‑GATCAAAATATTGGGGGCGAGCGGCCCCCCGGCCCCTGTGGGGAG‑GGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTa < 6:315070/147‑1 (MQ=255) aTCGCACAATGGAGCGCGATCGGCCCCCCCGCCCCTCGGGGGAG‑AGGGTTAGGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAAc < 7:560097/149‑1 (MQ=255) cAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGt > 7:192878/1‑149 (MQ=255) actttGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGtt < 6:564041/145‑1 (MQ=255) caatgttgcgATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCg > 5:845521/8‑148 (MQ=255) tGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAg > 2:309407/1‑275 (MQ=255) aGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTGGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTCTCAACCGCCTTTACGAATCAAATCACGATAATGCAGTCCTTCTTTCTCTCTATCAACCAGTTCGTGTTCCCGTCATGCACAAAACCCAGGAATCTCGCGGGTAGCGCCCGGTTCGGCGACAAAAACCCGCCACGTTTCCCCAGGCTCTAAGTTGCCCACCGTTTTGAGGACAACCACCACCTGTTCCGGGCAgc > 4:358789/1‑274 (MQ=255) aGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGaaa > 6:910059/1‑52 (MQ=255) aGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGaaa < 5:910059/52‑1 (MQ=255) gcgcGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTcc > 7:538243/1‑149 (MQ=255) gcgATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATAACGCGGGATGGGGCCGGATCGTCGGCGATAAACAGCAACGTTTCGCCAGGCGGCATATTGCGCACGGTCTTGCGCCCCATCTTCCCCGTTTCCcggaccct > 4:243145/1‑267 (MQ=255) gATCGGTCCCCTCGCCCCTCTGGGGGG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaa > 8:479188/1‑149 (MQ=255) gATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaa > 7:659032/1‑149 (MQ=255) gATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGc > 2:183559/1‑275 (MQ=255) gATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGAATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCCGCGCAGGc > 2:584008/1‑275 (MQ=255) aTCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaa > 6:280899/1‑148 (MQ=255) aTCGGTCCCCTCGCCCCTCAGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAGTAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCACTTCGTGTTCCATaa > 6:81827/1‑148 (MQ=255) gcGGTCCCCTCGCCCCCATGGGGAA‑GGGGTTAGGGATAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaaa < 5:689923/147‑1 (MQ=255) ctaacccTCTCCCCAGAGGGGCG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAgg > 5:381634/5‑148 (MQ=255) taacccTCTCCCCAGAGGGGCG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGt > 6:379286/4‑148 (MQ=255) taacccTCTCCCCAGAGGGGCG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTa > 7:722052/4‑149 (MQ=255) tCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTa > 5:908689/1‑148 (MQ=255) acccTCTCCCCAGAGGGGCG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTAc > 6:587681/2‑148 (MQ=255) cccTCTCCCCAGAGGGGCG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaaa < 8:821723/142‑1 (MQ=255) ccTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCa > 7:75240/1‑101 (MQ=255) ccTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCa < 8:75240/101‑1 (MQ=255) ccTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaa > 5:907364/1‑148 (MQ=255) cTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaaaa < 7:667718/149‑1 (MQ=255) cGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAAc > 5:387282/1‑148 (MQ=255) | CGACGCAGCATTAACCCATAACCACCTGCGCGGCCTGGTGCAAATGATTGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGC > NC_000913/3608418‑3608950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |