| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,608,701 | A→C | 7.4% | intergenic (+52/+50) | zntA → / ← tusA | zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,608,701 | 0 | A | C | 7.4% | 265.8 / 15.7 | 103 | intergenic (+52/+50) | zntA/tusA | zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base A (51/39); new base C (5/3); total (57/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.07e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
ACCCATAACCACCTGCGCGGCCTGGTGCAAATGATTGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGT > NC_000913/3608431‑3608959 | aCCCATAACCACCTGCGCGGCCTGGTGCAAATGATTGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑Agg > 2:236254/1‑275 (MQ=255) tAACCACCTGCGCGGCCTGGTGCAAATGATTGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAACCC‑GATCGCAACACTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAg > 1:210826/1‑275 (MQ=255) tGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGCTTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCCCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCa > 1:79776/1‑274 (MQ=255) tCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑tt < 2:7545/214‑1 (MQ=255) gggCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAgg > 2:506526/1‑191 (MQ=255) tGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGa < 4:506524/191‑1 (MQ=255) cacGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAAACAGTTCGTGTTcc > 2:353331/1‑274 (MQ=255) gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGga < 7:265978/149‑1 (MQ=255) aGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGag‑ag < 7:580578/149‑1 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCTCCTCTGGGGAG‑Agg < 7:67490/149‑1 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGag‑ag < 6:226194/148‑1 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGag‑ag < 5:319121/148‑1 (MQ=255) gATGACCGGGTTGTGGTTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑Aggg > 5:580439/1‑148 (MQ=255) gATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑t > 7:30833/1‑149 (MQ=255) tGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑tt < 6:510813/148‑1 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAgg < 8:470791/149‑1 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAgg > 8:112758/1‑149 (MQ=255) ccGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCATCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGAAACCAGTTCGTGTTACATAAGGGTACAAAAcaaa > 1:204875/1‑272 (MQ=255) cGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAggg < 6:148691/148‑1 (MQ=255) gggTTGTGGCTGGCAGTGCTGGCAGATGCGGGGGCGACGGTGCTGGTGAAAACGAATGCGATAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GAGCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑ACAggga > 6:689923/1‑147 (MQ=255) gggTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGt > 6:197909/1‑148 (MQ=255) gTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑g < 7:238879/149‑1 (MQ=255) gTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑g < 7:781725/149‑1 (MQ=255) gTTGTGGCTGGCAGTGCTGGCACATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑CTAGGGTGa < 5:783568/148‑1 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑gg < 8:785094/149‑1 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑gg < 7:309811/149‑1 (MQ=255) ctggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGaaa < 5:805179/148‑1 (MQ=255) ggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAgg < 7:296398/135‑1 (MQ=255) ggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAgg > 8:296398/1‑135 (MQ=255) ggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAgg > 7:224344/1‑149 (MQ=255) cTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATc > 7:365480/1‑149 (MQ=255) cAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGaa > 6:737947/1‑148 (MQ=255) taggggggCGAGGGTGCGGGTAACAGCGAAGGCGTAAAGATTGTTGCCACGGAGAAAAGGCAACCG‑GGCAGCAACATTCGGCGCGACCGGCCCCCCCGCCCCTCTGGGGGG‑GGGG‑TTCGGGTGA‑GGGAAAAAGGCGGCATCGAAGCCaa < 8:365480/146‑1 (MQ=255) gggCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGCCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATAGCGCGGGTAGTGGCCGGATCGTCGCCg > 1:228888/1‑275 (MQ=255) gggagggtggtGGGGACAGCGAAGGGGTTAAGGTTGTTGCGAGGGAAATAAGGAAAACC‑AACCCAAACATGGAGGGCATACGTTCCCCTCGCCCCGCTGGGGAG‑AGGG‑TGGGGTTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGccc < 8:895378/144‑1 (MQ=255) cGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGccc > 5:366333/1‑148 (MQ=255) gACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCt > 8:667718/1‑149 (MQ=255) cGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTa > 5:648394/1‑148 (MQ=255) ggTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTaagatcgg > 5:664310/1‑141 (MQ=255) gTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGc > 5:564041/1‑148 (MQ=255) cggaaaaTGGGTTAAGTTCTTTGCGGGGGGGA‑AAGGAAAACCAGATCACAAAATTGAGCGTGATCGGTCCCCTCGCCCCGC‑GGGGAGAAGGG‑TTGGGCGGG‑GAGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTa < 7:112758/144‑1 (MQ=255) aGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAACCC‑GATCGGAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGCATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAAAGtttag > 1:72956/1‑272 (MQ=255) aGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCCATCAGCCCCTATCAACCGCCTTTACGAATCAACTCACGATAAGGCAGTCCATCCGTCTCGTCAGCAACCAGTTCGTGTTCCAGAAAGGTACAAAACCCAGGAATATCTCGGGTGGTGGCCGGATCGACGGGGATACACGGCACAGTTTCg > 4:76196/1‑274 (MQ=255) aGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTACCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCaaa > 2:395310/1‑125 (MQ=255) caaaTGCTTTAAGATTGTGGCGAAGGAGAAAAGGAAAACC‑GATCGCAACATTGGGCGCGACCGCCCCCCCCCCCCTTGGGGGGAG‑GGGG‑TTGGGGTGG‑GGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACg < 5:737947/146‑1 (MQ=255) cGAACGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCCACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGCCAGGCCATCCGTCTCTTTAGCAACCAGTTCTTGTTCCATAACGTTACAAACCCCAGGAATATAGCGGGTAGTGGCCGGATCGTCGGCGATAATCAAAAAAGttttccc > 1:80825/1‑270 (MQ=255) gAATGCTTTAAGTTTGTGGCGCAGGAGAAAAGGAAACCC‑GACCGAAAAATGGAGCGCGATCGGCCCCCCCGCCCCTCGGGGGAG‑AGGG‑TTAGGGGGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGa < 5:432853/148‑1 (MQ=255) aaTGCGTTAAGTTTGTTGCGAAGGAAATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGCCCCCCCGCCCCTCTGGGGAG‑GGGG‑TTAGGGTGG‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAAt < 8:823348/149‑1 (MQ=255) ttAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAgg > 5:651202/1‑100 (MQ=255) ttAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAgg < 6:651202/100‑1 (MQ=255) aTTTTTGCGAAGAAAATAAGGCAAACC‑GATCGAAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑GGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGAt < 7:884661/149‑1 (MQ=38) ttgCGCAGGAGATAAGGAAAACG‑GAGCGAAACATTGCGCGCGATCGGCCCCCCCGCCCCTCGGGGGAG‑GGGG‑TTGGGGGGG‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAgg < 8:139364/149‑1 (MQ=255) aGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTc > 6:36134/1‑148 (MQ=255) tAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGt > 7:893964/1‑149 (MQ=255) tAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGCCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGT‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCATTTACGCATCTAATAACGATAAGGCAGTCCATCCGt > 8:560097/1‑149 (MQ=39) aaGGCAAACC‑GATCGCAACATTGGGCGCGATCGGCCCCCTCGCCCTTCGGGGGAG‑AGGT‑TTAGGGGGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGt < 5:60639/148‑1 (MQ=255) cAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTGGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTctct < 6:754217/148‑1 (MQ=255) aaaCG‑GATCGAAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGCG‑AGGG‑TTAGGGGGA‑GGTGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACGGCCTTACCGAATCAAATAAAGATAAAGCAGTCCANCCGGCTCTTTCGAAAGCAGTTCGTGTTCAACACAGATACAGAACCCAGGAAAAGCGAGGGTAGAGGACGGAAGANCGGCGACAAACAGCAGCATTTCCGCACGATNNATATTGCGGCCGGGGTTGGGCAcccacac > 3:101161/1‑270 (MQ=255) aaCC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt > 5:458674/1‑148 (MQ=255) aaCC‑GATCGAAACATTGAGCGGGATCGGCCCCCCCGCCCCTCGGGGGGG‑GGGG‑TTAGGGGGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt < 6:366333/148‑1 (MQ=255) ccc‑GATCAAAATATTGGGGGCGAGCGGCCCCCCGGCCCCTGTGGGGAG‑GGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTa < 6:315070/147‑1 (MQ=255) aTCGCACAATGGAGCGCGATCGGCCCCCCCGCCCCTCGGGGGAG‑AGGG‑TTAGGGGGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAAc < 7:560097/149‑1 (MQ=255) actttGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGtt < 6:564041/145‑1 (MQ=255) caatgttgcgATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCg > 5:845521/8‑148 (MQ=255) tGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAg > 2:309407/1‑275 (MQ=255) aGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTGGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTCTCAACCGCCTTTACGAATCAAATCACGATAATGCAGTCCTTCTTTCTCTCTATCAACCAGTTCGTGTTCCCGTCATGCACAAAACCCAGGAATCTCGCGGGTAGCGCCCGGTTCGGCGACAAAAACCCGCCACGTTTCCCCAGGCTCTAAGTTGCCCACCGTTTTGAGGACAACCACCACCTGTTCCGGGCAgc > 4:358789/1‑274 (MQ=255) aGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGaaa > 6:910059/1‑52 (MQ=255) aGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGaaa < 5:910059/52‑1 (MQ=255) gcgcGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTcc > 7:538243/1‑149 (MQ=255) gcgATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATAACGCGGGATGGGGCCGGATCGTCGGCGATAAACAGCAACGTTTCGCCAGGCGGCATATTGCGCACGGTCTTGCGCCCCATCTTCCCCGTTTCCcggaccct > 4:243145/1‑267 (MQ=255) gATCGGTCCCCTCGCCCCTCTGGGGGG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaa > 8:479188/1‑149 (MQ=255) gATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaa > 7:659032/1‑149 (MQ=255) gATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGc > 2:183559/1‑275 (MQ=255) gATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGAATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCCGCGCAGGc > 2:584008/1‑275 (MQ=255) aTCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaa > 6:280899/1‑148 (MQ=255) aTCGGTCCCCTCGCCCCTCAGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAGTAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCACTTCGTGTTCCATaa > 6:81827/1‑148 (MQ=255) gcGGTCCCCTCGCCCCCATGGGGAA‑GGGG‑TTAGGGATA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaaa < 5:689923/147‑1 (MQ=255) ctaacccTCTCCCCAGAGGGGCG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAgg > 5:381634/5‑148 (MQ=255) taacccTCTCCCCAGAGGGGCG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGt > 6:379286/4‑148 (MQ=255) taacccTCTCCCCAGAGGGGCG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTa > 7:722052/4‑149 (MQ=255) tCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTa > 5:908689/1‑148 (MQ=255) acccTCTCCCCAGAGGGGCG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTAc > 6:587681/2‑148 (MQ=255) cccTCTCCCCAGAGGGGCG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaaa < 8:821723/142‑1 (MQ=255) ccTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCa > 7:75240/1‑101 (MQ=255) ccTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCa < 8:75240/101‑1 (MQ=255) ccTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaa > 5:907364/1‑148 (MQ=255) cTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaaaa < 7:667718/149‑1 (MQ=255) cgtccccCTGGGGGA‑AGGGATTAGGGGGAGGGGGAAAAGGCGGCATCGAAGCCAATCAACCCCTAGCAACCGCCTTTACGAATCAAATAACGAAAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGGGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGt < 4:183558/271‑1 (MQ=255) ccccTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAg < 7:379707/97‑1 (MQ=255) ccccTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAg > 8:379707/1‑97 (MQ=255) ccctggggggAG‑AGGG‑TTGGGGAGA‑GGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCa < 5:529593/142‑1 (MQ=255) cccagaggggCG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCa < 5:379286/142‑1 (MQ=255) cccTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCa > 7:119342/1‑119 (MQ=255) cccTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCa < 8:119342/119‑1 (MQ=255) cccTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGtt < 7:615293/128‑1 (MQ=255) cccTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGtt > 8:615293/1‑128 (MQ=255) cccTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAg > 8:173713/1‑149 (MQ=255) ccTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAg < 6:907364/148‑1 (MQ=255) gggAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGTAatat < 6:648394/148‑1 (MQ=255) ag‑agGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTg > 2:97475/1‑204 (MQ=255) | ACCCATAACCACCTGCGCGGCCTGGTGCAAATGATTGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGG‑TTAGGGTGA‑GGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCAGCAACGTTTCGCCAGGCTGCATATTGCGCACGGTTTTGCGCACCATCATCACCGGTTCCGGGCAGCGCAGGCCAAGCGCGT > NC_000913/3608431‑3608959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |