| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,307,298 | G→A | 6.4% | P168S (CCC→TCC) | alsK ← | D‑allose kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,307,298 | 0 | G | A | 6.4% | 430.3 / 15.1 | 140 | P168S (CCC→TCC) | alsK | D‑allose kinase |
| Reads supporting (aligned to +/- strand): ref base G (60/71); new base A (4/5); total (64/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.23e-03 | |||||||||||
Only 100 of 149 total aligned reads displayed.
AGGCGGGCATATCCATCACGCCACCGCCCAGGATCACCGCATCGGGATCGAACAGATTAATGCTGGTGGCAATGGCCCGTGCCGCGTTTTCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATC > NC_000913/4307040‑4307568 | aGGCGGGCATATCCATCACGCCACCGCCCAGGATCACCTCATCGGGATCGAACAGATTAATGCTGGTGGCAATGGCCCGTGCCGCGTTTTCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTc < 2:77603/274‑1 (MQ=255) gggCCTATCCAGCAAGCCCCCGCCCAGGATCACCGCATCAGGATTGAACAGATTAATGTTGGTGGTAACGGCCCGTGCCGCGTTTTCCAGCAGACTCTGAACGAAAGGGGCGTTTTCAGCATGGACGAAAAGGTCGCGCAATCGGTATTTTCGGGGCTGTTGGTCGTACCAGCGTCTTAGCGCCATTCCAGGGCAATGGGTTTCCAGGCACCCAGGATTGCCACCCGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTg < 4:210646/275‑1 (MQ=255) atCCATCACGCCACCGCCCAGGATCACCGCATCGGGATCGAACAGATTAATGCTGGTGGCAATGGCCCGTGCCGCGTTTTCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCcaca < 2:603086/274‑1 (MQ=255) ccGCCACCGCCCAGGATCACCGCATCGGGATCGAACAGATTAAGGCTGGTGGCAATGGCCCGTGCCGCGTTGTCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGGCGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGtgtg < 2:37440/273‑1 (MQ=255) gCCACCGCCCAGGACACCCGCATCGGGATCGACCAGATTAATGCTGGTGGCAATGTCCCGTGCCGCGTTTTCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCa < 1:689/274‑1 (MQ=255) agtcacACCGCATTGGGATCGAACAGATTAATGCTGGTGGCAATGGCCCGTGCCGCGTTTTCAAGCAGACTCTGGACGACAGGGGCGTTTTCAGCATGGACGAAACGAGCGCGCAATGGGTAATTTCGGGGCCGTTGGTCGTACCAGCGCCTTAGCGCCATTCCAGAGCAATTGGTTCCCCGGTAGCCAGGATTGCCCCGCGCGCGAGAG‑TGGGTCACATCTCCCAGGGGGATTTGCTACATTCCGCCTGCCGCCCCGTTTGACCTCGTACACg > 4:455685/6‑274 (MQ=255) tCACCGAAGGGGGACTGAAAAGATAAAGGGGGGGGGCAATGGCCCGGGCCCCGGTTTCAAGCAGACTCGGGAAGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCa < 4:520946/275‑1 (MQ=255) tCGGGATCGAACAGATTAATGCTGGTGGCAATGGCCCGTGCCGCGTTTTCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACCCCGTGTGCACCCGTCCACGGCGCACCGTTCAt > 2:520948/1‑275 (MQ=255) aaCAGATTAATGCTGGTAGCAATGGCCCGTGCCGCGTTTTCAAGCAGACTCTGGACGAAAGGGGCGTTTTCAGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGGGTTGGGACATACCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGGTTGCACCCGTCCCCGGGGCCACGTTCATCCCAACTg > 4:509985/1‑274 (MQ=255) aCAGATTAAGGCTGGTGGCAATGGCCGGTGCCGCGTTTTCAAGCAGACTCTGGACGAAAGGGGCGTTTTCAGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCg < 2:455687/275‑1 (MQ=255) gtatggCTGGTGGCAAAGGCCCGTGCCGCGTTTACAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATGCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAAccc < 2:391101/270‑1 (MQ=255) cTGGGGGCAATGGCCAGTGCCGCTTTTGCAAGCAGACTCTGGACGAAAGCGGCTTTTTCCGCATGGACGAAAAGATCGCGAAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATccc < 1:146655/275‑1 (MQ=255) gtggCAATGGCCCGTGCCGCGTTTTCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACCCTGCGAACCCCATcccct > 2:621019/1‑273 (MQ=255) gtggCAATAGCCCGTGCCGCGTTTTCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGGCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACCCCGTGTGCACCCGTCCACGTCGCACCGTTCCTCCACACTGCGAACCCCATCCCCg > 2:494374/1‑274 (MQ=255) aCTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGt > 2:567864/1‑175 (MQ=255) aGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCg > 1:105984/1‑188 (MQ=255) ggggCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAgggg < 7:763395/149‑1 (MQ=255) gCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCa < 3:105983/188‑1 (MQ=255) cGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGata < 7:86091/149‑1 (MQ=255) cGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTc > 2:668218/1‑185 (MQ=255) cGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCCCCCTGGGAGat < 5:324062/148‑1 (MQ=255) gTTTTCCGAATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTctacta < 2:133218/275‑1 (MQ=255) ttttCGGCTGGGACGAAAAGACGGCGAAATGGGGAATTTGGGGGCAGTGGTTCGTACCAGGGTCTTAGGGCCATTCAGTGGCAATTGGTTTCCAGGGACCAAGGATGGCCAAACGCGC‑AGTGTTGGGTCATACTTCCCAGGGGGTGATGCCCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTctacta < 4:621017/274‑1 (MQ=255) tttCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATg > 6:451338/1‑148 (MQ=255) cGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGcc > 6:812042/1‑148 (MQ=255) aaaaGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTg > 5:145192/1‑148 (MQ=255) gATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCcaca < 7:355083/149‑1 (MQ=255) gcAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCgtgt < 8:801827/149‑1 (MQ=255) gcAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCgtgt < 7:161625/149‑1 (MQ=255) aaTTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAggggg > 5:223985/1‑110 (MQ=255) aaTTTCGGGGCTGTTGTGCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGa < 1:74803/209‑1 (MQ=255) ggggCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGgc > 7:421799/1‑149 (MQ=255) gggCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCg > 6:56173/1‑118 (MQ=255) gggCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCg < 5:56173/118‑1 (MQ=255) gggCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCCCCGTTCAt > 4:68960/1‑159 (MQ=255) tgttgtTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCCCCCTGGGAGatat > 8:635716/1‑103 (MQ=255) tgttgtTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCCCCCTGGGAGatat < 7:635716/103‑1 (MQ=255) ttgttCGTACCAGCGTCTTATCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCCGTTCGCCTTCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACCGCGAACCCCATCCCCGTACCGAGATAGGCCCCCACAACCCGTATCTGCGTAAGGCGTGTTCCGACTACCTCCCAGGAAAGGTGCAGGTTAACGTAACGCGAAAACCCAATCgacc > 4:573465/1‑272 (MQ=255) ttCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCa > 8:77151/1‑149 (MQ=255) ttCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCa > 8:386591/1‑149 (MQ=255) tCGTACCGGCGTCTTATGGCCATTCCAGGGCAATTGGTTTCCAGGCACCCAGGATTGCCACCCGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAAtt < 2:224688/275‑1 (MQ=255) cGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCAt < 5:451338/148‑1 (MQ=255) cGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACTTCCCAGGAGAGTTGCAGTTTAACGTCGCGGGAAACCTCAACCGGCCCAtt > 2:601829/1‑274 (MQ=255) aGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCacac > 5:501481/1‑148 (MQ=255) gCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACt > 5:385696/1‑148 (MQ=255) tCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGa > 8:180281/1‑149 (MQ=255) tCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTAtttt > 2:462553/1‑275 (MQ=255) cTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGaa < 7:490226/149‑1 (MQ=255) ttAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCa < 2:252401/153‑1 (MQ=255) ttCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAggggg < 7:350862/71‑1 (MQ=255) ttCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAggggg > 8:350862/1‑71 (MQ=255) ttCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCAt > 3:102534/1‑127 (MQ=255) ttCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATCGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGATAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACCATACAGCGTATTTTctgacttctcg > 2:183702/1‑265 (MQ=255) agagCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCcac < 1:102535/127‑1 (MQ=255) gagCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGgcgc > 4:618447/1‑113 (MQ=255) gagCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTAc < 5:262046/148‑1 (MQ=255) gagCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTAc > 6:268453/1‑148 (MQ=255) gagCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCAACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTAc > 6:452382/1‑148 (MQ=255) ccaTTGGTGTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCgaga < 1:15054/271‑1 (MQ=255) aTTGGTTTCCAGGCACCGAGAATTGCAACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATGTGACCCAGTTCGCCTGCCACACAGTGTGCACCCGTCCCCGGCGCACCGTTCATCCACACTTCGAACCCCATCCCCGTACCtaga > 6:387178/1‑148 (MQ=255) aTTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACCCTGCGAACCCCATCCCCGTACCGAGATAGGNCGCCAGCACCAGTTGTTGCGTAAGGCGGGTTTCTACTACGTCCCAGGANNGtt > 4:734642/1‑206 (MQ=255) aTTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCgaga < 6:501481/148‑1 (MQ=255) ttGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATa < 7:860578/149‑1 (MQ=255) ttGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCAACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGAt < 5:452382/148‑1 (MQ=255) gTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAgg < 6:2053/148‑1 (MQ=255) gTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGgc > 8:418870/1‑149 (MQ=255) gTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAAtt < 2:734644/239‑1 (MQ=255) ttCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCgaga < 6:595507/142‑1 (MQ=255) ttCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCgaga > 5:595507/1‑142 (MQ=255) ttCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTCAGCCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTTGGGCTTTACGGCCAAATCaaataaat > 4:218753/1‑275 (MQ=255) aGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCgaga < 2:218754/261‑1 (MQ=255) ggCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGgccgc > 5:726945/1‑145 (MQ=255) ggCACCCAGGATTGCCACACGCGC‑AGGGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAg > 6:278736/1‑148 (MQ=255) gCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGa < 5:176697/148‑1 (MQ=255) aGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGCCCCAGTTCGCCTGCCACCCCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAgt < 5:387178/148‑1 (MQ=255) aGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAgtt > 7:200773/1‑149 (MQ=255) gATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCgaga > 5:841056/1‑128 (MQ=255) aTTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAAccc > 6:425138/1‑111 (MQ=255) cacGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGa < 6:182457/132‑1 (MQ=255) acGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCgaga < 2:497116/242‑1 (MQ=255) cgcgC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCCGGTTAACGTCGCGGGAAAACTCCACCGGACAATTCATCGTATTTTCGAGCTTTACGGCTAAATCATAAAAATcagccccgtt > 4:571386/1‑256 (MQ=255) gtgtttGGGTCATTTACCCCAGGGGGGAATACGCCAGTCCGCCTGCCACACCGTGTGCACCCGTCAACGGCGAACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGATTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGt < 4:462551/270‑1 (MQ=255) aatgttgtGTAATTTATCCCGGGGGCAGCAGACACAGATCGCTGGCTACGCCGTGTGCACCAGCCCAGTGAGCACCGTTAAGCCACACTGCGAACCCGATCCCCGCACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCACAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGt < 4:290135/272‑1 (MQ=255) aGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGgc > 3:39993/1‑71 (MQ=255) ttGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCAc < 1:39994/71‑1 (MQ=255) tCATATCCCCCTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTAc < 7:41106/99‑1 (MQ=255) tCATATCCCCCTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTAc > 8:41106/1‑99 (MQ=39) tCATATCCCCCTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACg > 8:187355/1‑149 (MQ=255) caaagctcACAGGGGGAAGTCACCCAGTGCGCCTGCCACCCCGGGTGCACCCGCCCACGGCGCACCGTTCATCCACACTGCGAACCCCGTCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATg < 2:285869/269‑1 (MQ=255) cATATCCCCCTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTa < 5:526652/130‑1 (MQ=255) cATATCCCCCTGGGAGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTa > 6:526652/1‑130 (MQ=255) tatCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGt > 2:114620/1‑127 (MQ=255) tatCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTcc > 8:6313/1‑149 (MQ=255) atCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTcc > 5:811586/1‑148 (MQ=255) ctcCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAg < 7:77151/149‑1 (MQ=255) tcCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAgg < 4:114619/127‑1 (MQ=255) cccAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAAcc > 6:107871/1‑111 (MQ=255) cccAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCAGCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCg < 1:11587/272‑1 (MQ=255) aGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAAACCCATCCCCGTACCGAGATAGGCCGACAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGCCAATATAGCGTATTTTCGCGCTTATCGGCGAGAACATATAAATCCGCCGCTGTTAAAGGCAGGTTGGGTGGTGAAATTATGGGGCGTTTTTc > 4:285868/1‑275 (MQ=255) gggATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGtt > 6:79927/1‑148 (MQ=255) | AGGCGGGCATATCCATCACGCCACCGCCCAGGATCACCGCATCGGGATCGAACAGATTAATGCTGGTGGCAATGGCCCGTGCCGCGTTTTCAAGCAGACTCTGGACGAAAGGGGCGTTTTCCGCATGGACGAAAAGATCGCGCAATGGGTAATTTCGGGGCTGTTGTTCGTACCAGCGTCTTAGCGCCATTCCAGAGCAATTGGTTTCCAGGCACCCAGGATTGCCACACGCGC‑AGTGTTGGGTCATATCTCCCAGGGGGATATGACCCAGTTCGCCTGCCACACCGTGTGCACCCGTCCACGGCGCACCGTTCATCCACACTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATC > NC_000913/4307040‑4307568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |