| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 650,529 | G→A | 5.5% | R85R (CGC→CGT) | citD ← | citrate lyase, acyl carrier (gamma) subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 650,529 | 0 | G | A | 5.5% | 470.1 / 10.2 | 146 | R85R (CGC→CGT) | citD | citrate lyase, acyl carrier (gamma) subunit |
| Reads supporting (aligned to +/- strand): ref base G (56/80); new base A (4/4); total (60/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.71e-01 | |||||||||||
Only 100 of 153 total aligned reads displayed.
TGGTTTCAATATCGCGATACAGCGGATGTTGCAGCGCGTGGTAAACCATGCGGCGGGCGGTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGCTGGTTTATTTTCAT > NC_000913/650271‑650783 | tGGTTTCAATATCGCGATACAGCGGATGTTGCAGCGCGTGGTAAACCATGCGGCGGGCGGTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCCCAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGGTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGGAgggagt > 2:512496/1‑272 (MQ=255) atCGCGATACAGCGGATGTTGCAGCGCGTGGTAAACCATGCGGCGGGCGGTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGc < 2:471793/275‑1 (MQ=255) gATACAGCGGTGGTTGCAGGGCGTGGTAAACCATGCGGCGGGCGGTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTa < 1:89201/275‑1 (MQ=255) gATACAGCGGATGTTGCAGGGCGTGGTAAACCATGCGGCGGGCGGTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTa < 2:696288/275‑1 (MQ=255) aTACAGCGGATGTTGCAGCGCGTGGTAAACCATGCGGCGGGCGGTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTa < 2:168976/274‑1 (MQ=255) aTACAGCGGATGTTGCAGCGCGTGGTAAACCATGCGGCGGGCGGTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTa < 2:419721/274‑1 (MQ=255) tGCAGCGCGTGGTAAACCATGCGGCGGGCGGTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCcagca < 2:518424/240‑1 (MQ=255) ggTGGTAAACCCTGCGGGGGGTGGTGTCTTTGTCACACAATGCGACGGAGTCTTCGAGGTCAAACATCAGGGCAGCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGAAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCt < 1:153511/273‑1 (MQ=255) aaCCATGCGGCGGGGGGTGTCTTTTTCACGGAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGACGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCAt < 4:140956/274‑1 (MQ=255) aaCCAGGCGGCGGGCGGTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCcagca < 2:382557/226‑1 (MQ=255) ggcggcgGGCGGTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACa < 2:232383/273‑1 (MQ=255) cgggcggTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTGGCTGACCATCGCGGCATTGGCACCCGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTTCACGTT‑TTGCCGCCGAAG‑GGCAACCATTGGCAATCCGACCATGGCCGAGCCGGGGGACCGCCGGCGCGTCCCCGACGTGCTTCCCGTCGGGTACGTCACATGCAGTCCCGGGCGCCTTTGTAATCgcgattacgc > 4:464541/1‑266 (MQ=255) gcggTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGt < 2:17553/275‑1 (MQ=255) aaTGCTACGGGGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTa < 2:650242/274‑1 (MQ=255) gAGTATTCGCGGTCAAACAATAGGGCGTCGGCCGGGTAGAGGAATGAGTTGCTGACCATCGGGGCATTGGAACCAGGCACAAACAACAGTCTGAGGCGGGGGGGAGTTTG‑ACGTTGTTGCAG‑CTAAGGGGAAATCATTGGAAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTGTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCgaga < 4:430111/275‑1 (MQ=255) tttagggggcAAACAGCAGGGCATCAGCCGGGTGGATGAAGGAGTTCCTGACCATCGCGGCATTGGAACCAGGCACAAACAACAGGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACg < 4:542454/265‑1 (MQ=255) cAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGgcg > 6:848385/1‑148 (MQ=255) gCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGt < 7:608956/149‑1 (MQ=255) gCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGt < 7:588300/149‑1 (MQ=255) gggTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGcc > 8:587503/1‑149 (MQ=255) gggTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGcc > 7:329389/1‑149 (MQ=255) tGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAGACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACTGCTGGCACGCGCcagcggta < 7:461629/149‑5 (MQ=255) gAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCCGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTTCATAGCCCAACTGttt > 2:666966/1‑275 (MQ=255) gAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAggg > 6:580583/1‑148 (MQ=255) aaGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGc > 5:502582/1‑148 (MQ=255) aaGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCACGCGCcagcggtatc < 7:135690/149‑7 (MQ=255) ggAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCtt < 6:466789/148‑1 (MQ=255) ggAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTc < 7:565863/149‑1 (MQ=255) ggAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTAcg > 2:337697/1‑207 (MQ=255) ttGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTAcgccgc < 4:337695/207‑1 (MQ=255) tGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTc < 8:103431/149‑1 (MQ=255) gACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGc > 8:740707/1‑149 (MQ=255) gACCATCGCGGCAGTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTtctc < 1:73380/266‑1 (MQ=255) tCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGt > 6:716243/1‑148 (MQ=255) cgcgGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCTATGGCAGAGCCGGGATACCGCTGGCGCGTGCcagca > 4:135829/1‑127 (MQ=255) cgGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTaaa < 6:249951/148‑1 (MQ=255) cgGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCAACgctg > 2:693585/1‑265 (MQ=255) tccttGGCGCCAGCGCCAAACAGCTGGCCGCGGCGTGTGGGGTTGTT‑ACGGTGTTGCGG‑GCAAGCGAACATCATTGGGAATCCTCCCATGGCAGAGCCGTAAAACGTCTGCGTCGGGCCAGCAGGGATTCCATGAGTGCACGTAAAATTCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCACCAAACTGTTTCTCAACGCTGCTATTGATTTg < 4:476291/271‑1 (MQ=255) cATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCa < 2:94234/275‑1 (MQ=255) aTTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGc < 5:216732/148‑1 (MQ=255) aTTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCa < 8:469758/149‑1 (MQ=255) ttGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGgcgc > 7:87308/1‑111 (MQ=255) ttGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCa < 7:163898/129‑1 (MQ=255) ttGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCa > 8:163898/1‑129 (MQ=255) gCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATAACGCTGGCGCGTGCCAGCAGGGCTTCCAGGCGTGCACGGAAAATGCAATCCAGGGCGCCTTTTTCATCGACCTTCAGGCTG‑ACGCCCCGCCCGGTTGT‑GCGGGCGAAAAACTCCAAAAAGGGTGTGCGGAATTCCTTCCCAAAACTGTTTCTCAACGCGCCTAtgtatt > 4:94233/1‑262 (MQ=255) aCCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGc > 5:256004/1‑142 (MQ=255) aCCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGc < 6:256004/142‑1 (MQ=255) aGGCACAAACAACATGCTGCGGCGGGTGCGCGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTTAAATGCAGTCCAGTgc > 7:360732/1‑149 (MQ=255) gCACAAAGAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCt < 2:565572/275‑1 (MQ=255) acaaacaaCATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCt > 7:519750/1‑149 (MQ=255) acaTGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCa > 6:712097/1‑148 (MQ=255) acaTGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCNt < 7:111087/149‑1 (MQ=255) caTGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATc < 8:602941/149‑1 (MQ=255) caTGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATc < 7:850625/149‑1 (MQ=255) caTGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATc < 8:255424/149‑1 (MQ=255) ctgcGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACa < 7:889603/149‑1 (MQ=255) ctgcGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTg < 1:219734/173‑1 (MQ=255) cggGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑Gc < 7:740707/149‑1 (MQ=255) gggTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑Gc > 7:794145/1‑148 (MQ=255) gggTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑Gc < 5:435383/148‑1 (MQ=255) gggTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑Gc < 8:794145/148‑1 (MQ=255) tGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTa > 7:201167/1‑149 (MQ=255) tttt‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTAcgccgc > 8:556737/1‑149 (MQ=255) tt‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATcac < 2:312412/274‑1 (MQ=255) aCGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCa < 5:459748/148‑1 (MQ=255) gttgttGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑Gt > 8:446528/1‑149 (MQ=255) gttgttGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑Gt > 7:570688/1‑149 (MQ=255) ttgttgCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑Gt < 5:159659/148‑1 (MQ=255) tgttgCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTg < 7:306903/149‑1 (MQ=255) ttgCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTa > 8:824155/1‑149 (MQ=255) gAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCg < 8:812253/149‑1 (MQ=255) gAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCg > 8:568651/1‑149 (MQ=255) cGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATTCGTATCATCACATCCCCAGACTCAAGGGTg > 2:272178/1‑274 (MQ=255) ggAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAAc < 7:824155/149‑1 (MQ=255) aTCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTg > 5:666090/1‑90 (MQ=255) aTCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTg < 6:666090/90‑1 (MQ=255) cATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCa > 6:526279/1‑148 (MQ=255) aTTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGc > 2:65483/1‑136 (MQ=255) aTTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGa > 7:329318/1‑149 (MQ=255) gCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCgaga < 4:65482/136‑1 (MQ=255) gCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCaa < 4:765572/182‑1 (MQ=255) cAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCga > 6:92982/1‑133 (MQ=255) cAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCga < 5:92982/133‑1 (MQ=255) cAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAAtggt < 8:329318/149‑1 (MQ=255) aaTCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACTTCCAGAAt < 6:559426/145‑1 (MQ=255) aaTCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAAt > 5:559426/1‑145 (MQ=255) ccATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCGTCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑Gaa > 7:850125/1‑149 (MQ=255) aTGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAAtt < 7:431663/149‑1 (MQ=255) ggCAGAGCCGGGATACCGCTGGCCCCGGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGCTGGTTTAtttt < 2:464543/275‑1 (MQ=255) cAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCAt < 8:390792/149‑1 (MQ=255) agagCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑Gaa < 8:407513/142‑1 (MQ=255) agCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGCTGGTTTATTTTCAt > 2:669319/1‑273 (MQ=255) cGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCa > 6:426735/1‑148 (MQ=255) gggATACCGCTGGCGCGTGCCAGCAGGTCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAAc < 8:621323/116‑1 (MQ=255) gggATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAAc > 7:621323/1‑116 (MQ=255) tgCTGGCACGCGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAAt < 7:807354/117‑1 (MQ=255) gCTGGCACGCGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGt > 6:354071/1‑145 (MQ=255) ggCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTAcgc > 2:770270/1‑80 (MQ=255) ggCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCaa < 8:873498/149‑1 (MQ=255) gcgcGTGCCAGCAGGGCTTCAAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCAAc > 8:802055/1‑149 (MQ=255) | TGGTTTCAATATCGCGATACAGCGGATGTTGCAGCGCGTGGTAAACCATGCGGCGGGCGGTGTCTTTTTCACGCAATGCTACGGAGTCTTCGAGGTCAAACATCAGGGCATCAGCCGGGTAGATGAAGGAGTTGCTGACCATCGCGGCATTGGCACCAGGCACAAACAACATGCTGCGGCGGGTGCGAGTTTT‑ACGTTGTTGCAG‑CGAAGCGGAAATCATTGGCAATCCTCCCATGGCAGAGCCGGGATACCGCTGGCGCGTGCCAGCAGGGCTTCCAGTCGTGCACGTAAAATGCAGTCCAGTGCGCCTTTGTCATCGACATTCA‑GCTGTACGCCGCGCAC‑GTTGTAGCGGGCGAGAACGTCCAGAATGGTGGTGC‑GAATTGCATCGCCAAACTGTTTCTCAACGCTGCTATTGATTTGCAGGTCGATATCCTGCGTATCGAGTGGGGCGATGCGTATCATCACATCCCCAGACTCAAGGGTGCCTGCAACGGCGGGCTGGTTTATTTTCAT > NC_000913/650271‑650783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |