| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,512,350:1 | +G | 9.6% | coding (65/957 nt) | fecD ← | ferric citrate ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,512,350 | 1 | . | G | 9.6% | 324.0 / 33.9 | 83 | coding (65/957 nt) | fecD | ferric citrate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base . (35/40); new base G (6/2); total (41/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.73e-01 | |||||||||||
GCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGG > NC_000913/4512204‑4512496 | gCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑g > 2:637730/1‑148 (MQ=255) cACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑gg < 2:360451/148‑1 (MQ=255) cACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGa < 3:889510/149‑1 (MQ=255) aCGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGa < 1:156557/148‑1 (MQ=255) cgcccgccACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACT‑CCATAT‑gggagt < 3:328182/149‑5 (MQ=255) gcccgccACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGTCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGt < 1:665339/148‑1 (MQ=255) gccACGGCGAGGGCTGCACCGACAAACAGTGCCAGTAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTGAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATaa < 3:616942/149‑1 (MQ=255) ccACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAAc < 3:160871/149‑1 (MQ=255) cACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACa < 4:864290/149‑1 (MQ=255) aGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGcaca < 3:804840/149‑1 (MQ=255) aGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGcaca > 4:804840/1‑149 (MQ=255) aCCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGcc < 1:152024/148‑1 (MQ=255) ccGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGccc < 3:103540/144‑1 (MQ=255) ccGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGccc > 4:103540/1‑144 (MQ=255) cGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAgg < 4:528398/149‑1 (MQ=255) aCAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGc > 3:841883/1‑149 (MQ=255) aaaCAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCaa > 4:44086/1‑149 (MQ=255) aCAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAg < 1:329612/148‑1 (MQ=255) aCAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAg < 2:616075/148‑1 (MQ=255) aGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAggg < 1:669527/148‑1 (MQ=255) gTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGt < 1:116603/148‑1 (MQ=255) gTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGACCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAgg < 4:24703/146‑1 (MQ=255) gTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGACCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAgg > 3:24703/1‑146 (MQ=255) tGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGtg > 2:395962/1‑148 (MQ=255) tGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGtg < 1:112333/148‑1 (MQ=255) agcaAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAGCAGCGCACAGccc < 3:482867/126‑1 (MQ=255) agcaAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAGCAGCGCACAGccc > 4:482867/1‑126 (MQ=255) aaGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAGAATAAc < 4:737472/149‑1 (MQ=255) aaGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATaa > 2:310908/1‑148 (MQ=255) gcgcGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAAcc > 2:885925/1‑148 (MQ=255) aGTCGGTACTCCATCAATACATAATAATGCTCGTGTGCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTTATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAAt > 3:69546/1‑149 (MQ=255) ggTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAAtttt < 1:735395/148‑1 (MQ=255) tCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCt > 4:152741/1‑149 (MQ=255) aTCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTc < 3:429402/141‑1 (MQ=255) aTCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTc > 4:429402/1‑141 (MQ=255) aTCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCg > 2:1432/1‑148 (MQ=255) aTCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGc < 3:152741/149‑1 (MQ=255) tCAAGACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGCTGAAAATAACCAGCGCAATTTTCATCCTCGc > 1:259423/1‑148 (MQ=255) aaTACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGcctc < 3:188824/149‑1 (MQ=255) aaTACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGcct < 2:901706/148‑1 (MQ=255) tACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGcctcc > 1:353266/1‑148 (MQ=255) aCATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGcctcct < 2:477845/148‑1 (MQ=255) aCATAATAAAGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGcctcct < 2:722112/148‑1 (MQ=255) cATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GCAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAAGCAGCGCAATTTTCATCCTCGCCTCCTca > 3:566268/1‑149 (MQ=255) taataaTGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTcaca > 3:767547/1‑149 (MQ=255) aataatGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACaa < 4:841883/149‑1 (MQ=255) cTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGa < 2:353266/148‑1 (MQ=255) tCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACa > 4:578091/1‑149 (MQ=255) cGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACa > 1:606925/1‑148 (MQ=255) cGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACa > 1:66862/1‑148 (MQ=255) gtgtCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACaa < 1:310908/148‑1 (MQ=255) cTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGc < 1:807803/148‑1 (MQ=255) gCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTg < 1:885925/148‑1 (MQ=255) ccAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGcc > 4:88634/1‑149 (MQ=255) tCGGTCAGCAGCGCGCGTCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCTCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGGCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATc < 4:764884/149‑1 (MQ=255) cGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCa < 3:699604/149‑1 (MQ=255) gTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGTAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAgc < 4:651733/149‑1 (MQ=255) tCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATa > 2:685015/1‑48 (MQ=255) tCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATa < 1:685015/48‑1 (MQ=255) gcgcgcCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACt < 4:566268/149‑1 (MQ=255) gcgcgcCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACt > 4:580748/1‑149 (MQ=255) gcacggGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCg < 2:606925/148‑1 (MQ=255) ggggATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAg > 3:281463/1‑149 (MQ=255) ttaTCACT‑CCATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGAt > 3:719605/3‑149 (MQ=255) ggATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGAt > 4:412756/1‑149 (MQ=255) gagcACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCAAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTg > 1:219903/4‑139 (MQ=255) gATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTg < 2:219903/139‑1 (MQ=255) tCACT‑CCATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGAtctc > 3:607796/1‑149 (MQ=255) tCACT‑CCATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGAtctc > 3:18194/1‑149 (MQ=255) cactccATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGAtctc > 1:312800/5‑148 (MQ=255) aCTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGTTGAAAATAACCATCGCAATTTTCATCCTCGCCTCCTCACAAGCCATACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCg > 4:664485/1‑149 (MQ=255) cTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCGTCCTCGCCTCCTCACAAGCCAGACAAAGCAAg < 1:570133/104‑1 (MQ=255) cTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCGTCCTCGCCTCCTCACAAGCCAGACAAAGCAAg > 2:570133/1‑104 (MQ=255) cTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCg < 2:259423/148‑1 (MQ=255) cTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCg > 2:518999/1‑148 (MQ=255) actccATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTACCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCg > 4:363618/4‑149 (MQ=255) tCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCggg > 3:91580/1‑149 (MQ=255) tCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCggg > 3:292678/1‑149 (MQ=255) ctccATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCg < 1:790275/146‑1 (MQ=255) ctccATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCg > 2:790275/3‑148 (MQ=255) ctccATATGGGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTACCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCgg < 3:363618/147‑1 (MQ=255) cccATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCggg > 1:276246/1‑148 (MQ=255) ccATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGa > 4:891955/1‑149 (MQ=255) ccATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGa > 4:440952/1‑149 (MQ=255) cATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGaa < 4:767547/149‑1 (MQ=255) cATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGa > 2:79278/1‑148 (MQ=255) atat‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGaa < 1:395962/148‑1 (MQ=255) atat‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGaa < 1:1432/148‑1 (MQ=255) at‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAgg < 2:741639/148‑1 (MQ=255) | GCACGCCCGCCACGGCGAGGGCTGCACCGACAAACAGTGCCAGCAGCAAGCGCGGCAGTCGGTACTCCATCAATACATAATAATGCTCGTGTCCGGCCTGCCAGTCGGTCAGCAGCGCGCGCCACGGCACGGGGATCACTCCCATAT‑GGAGTGATAACAGCGCACAGCCCGCCAGGGCAAGGGTGATGAAAATAACCAGCGCAATTTTCATCCTCGCCTCCTCACAAGCCAGACAAAGCAAGGGCTGCCAATCAGCGCCAGCACTGCGCCTGCGGGCAGATCTCCGGGGAAGG > NC_000913/4512204‑4512496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |