| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,608,694 | T→A | 7.3% | intergenic (+45/+57) | zntA → / ← tusA | zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,608,694 | 0 | T | A | 7.3% | 250.4 / 9.3 | 86 | intergenic (+45/+57) | zntA/tusA | zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base T (37/40); new base A (4/2); total (41/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.72e-01 | |||||||||||
CACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAG > NC_000913/3608547‑3608839 | cacGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCct > 2:588417/1‑148 (MQ=255) acGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCctct > 3:139364/1‑149 (MQ=255) acGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCctc > 2:432853/1‑148 (MQ=255) cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTggg < 4:816949/149‑1 (MQ=255) gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTgggg > 1:754217/1‑148 (MQ=255) gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGga < 3:265978/149‑1 (MQ=255) ttAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTgg < 4:130433/145‑1 (MQ=255) ttAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTgg > 3:130433/1‑145 (MQ=255) aGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGag‑ag < 3:580578/149‑1 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCTCCTCTGGGGAG‑Agg < 3:67490/149‑1 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGag‑ag < 1:319121/148‑1 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGag‑ag < 2:226194/148‑1 (MQ=255) gATGACCGGGTTGTGGTTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑Aggg > 1:580439/1‑148 (MQ=255) gATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGt > 3:30833/1‑149 (MQ=255) tGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGtt < 2:510813/148‑1 (MQ=255) gACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCTCCCCAGAGGGGCG‑Aggg < 4:903360/145‑1 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAgg > 4:112758/1‑149 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAgg < 4:470791/149‑1 (MQ=255) cGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAggg < 2:148691/148‑1 (MQ=255) cGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGt < 3:644412/149‑1 (MQ=255) gggTTGTGGCTGGCAGTGCTGGCAGATGCGGGGGCGACGGTGCTGGTGAAAACGAATGCGATAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GAGCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGACAggga > 2:689923/1‑147 (MQ=255) gggTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGt > 2:197909/1‑148 (MQ=255) gTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAg < 3:781725/149‑1 (MQ=255) gTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAg < 3:238879/149‑1 (MQ=255) gTTGTGGCTGGCAGTGCTGGCACATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGCTAGGGTGa < 1:783568/148‑1 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAgg < 4:785094/149‑1 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAgg < 3:309811/149‑1 (MQ=255) ctggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGaaa < 1:805179/148‑1 (MQ=255) ggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAgg > 4:296398/1‑135 (MQ=255) ggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAgg < 3:296398/135‑1 (MQ=255) ggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAgg > 3:224344/1‑149 (MQ=255) cTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATc > 3:365480/1‑149 (MQ=255) cAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGaa > 2:737947/1‑148 (MQ=255) taggggggCGAGGGTGCGGGTAACAGCGAAGGCGTAAAGATTGTTGCCACGGAGAAAAGGCAACCG‑GGCAGCAACATTCGGCGCGACCGGCCCCCCCGCCCCTCTGGGGGG‑GGGGTTCGGGTGAGGGAAAAAGGCGGCATCGAAGCCaa < 4:365480/146‑1 (MQ=255) gggagggtggtGGGGACAGCGAAGGGGTTAAGGTTGTTGCGAGGGAAATAAGGAAAACC‑AACCCAAACATGGAGGGCATACGTTCCCCTCGCCCCGCTGGGGAG‑AGGGTGGGGTTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGccc < 4:895378/144‑1 (MQ=255) cGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGccc > 1:366333/1‑148 (MQ=255) gACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCt > 4:667718/1‑149 (MQ=255) cGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTa > 1:648394/1‑148 (MQ=255) ggTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTaagatcgg > 1:664310/1‑141 (MQ=255) gTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGc > 1:564041/1‑148 (MQ=255) cggaaaaTGGGTTAAGTTCTTTGCGGGGGGGA‑AAGGAAAACCAGATCACAAAATTGAGCGTGATCGGTCCCCTCGCCCCGC‑GGGGAGAAGGGTTGGGCGGGGAGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTa < 3:112758/144‑1 (MQ=255) caaaTGCTTTAAGATTGTGGCGAAGGAGAAAAGGAAAACC‑GATCGCAACATTGGGCGCGACCGCCCCCCCCCCCCTTGGGGGGAG‑GGGGTTGGGGTGGGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACg < 1:737947/146‑1 (MQ=255) gAATGCTTTAAGTTTGTGGCGCAGGAGAAAAGGAAACCC‑GACCGAAAAATGGAGCGCGATCGGCCCCCCCGCCCCTCGGGGGAG‑AGGGTTAGGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGa < 1:432853/148‑1 (MQ=255) aaTGCGTTAAGTTTGTTGCGAAGGAAATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGCCCCCCCGCCCCTCTGGGGAG‑GGGGTTAGGGTGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAAt < 4:823348/149‑1 (MQ=255) ttAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAgg > 1:651202/1‑100 (MQ=255) ttAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAgg < 2:651202/100‑1 (MQ=255) aTTTTTGCGAAGAAAATAAGGCAAACC‑GATCGAAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑GGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGAt < 3:884661/149‑1 (MQ=38) ttgCGCAGGAGATAAGGAAAACG‑GAGCGAAACATTGCGCGCGATCGGCCCCCCCGCCCCTCGGGGGAG‑GGGGTTGGGGGGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAgg < 4:139364/149‑1 (MQ=255) tcgggaaGGAGAAAAGAAAAACC‑AAACAAAATATGGCGCGCGAGCGCCCCCCCCGGCCCTCGGGGGGG‑GGGGTGAGGGTGAGGAGAAAAGGCGGCCTCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAg < 1:831349/142‑1 (MQ=255) gcAGGAAAGAAGGAAAACC‑GATCGAAACATGGAGCGCGATCGGCCCCCTCGCCCCTCGGGGGAG‑AGGGTTGGGGTGGGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGt < 4:30833/149‑1 (MQ=255) aGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTc > 2:36134/1‑148 (MQ=255) tAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGt > 3:893964/1‑149 (MQ=255) tAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGCCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGTGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCATTTACGCATCTAATAACGATAAGGCAGTCCATCCGt > 4:560097/1‑149 (MQ=39) aaGGCAAACC‑GATCGCAACATTGGGCGCGATCGGCCCCCTCGCCCTTCGGGGGAG‑AGGTTTAGGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGt < 1:60639/148‑1 (MQ=255) cAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTGGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTctct < 2:754217/148‑1 (MQ=255) aaCC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt > 1:458674/1‑148 (MQ=255) aaCC‑GATCGAAACATTGAGCGGGATCGGCCCCCCCGCCCCTCGGGGGGG‑GGGGTTAGGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt < 2:366333/148‑1 (MQ=255) ccc‑GATCAAAATATTGGGGGCGAGCGGCCCCCCGGCCCCTGTGGGGAG‑GGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTa < 2:315070/147‑1 (MQ=255) aTCGCACAATGGAGCGCGATCGGCCCCCCCGCCCCTCGGGGGAG‑AGGGTTAGGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAAc < 3:560097/149‑1 (MQ=255) cAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGt > 3:192878/1‑149 (MQ=255) actttGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGtt < 2:564041/145‑1 (MQ=255) caatgttgcgATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCg > 1:845521/8‑148 (MQ=255) aGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGaaa > 2:910059/1‑52 (MQ=255) aGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGaaa < 1:910059/52‑1 (MQ=255) gcgcGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTcc > 3:538243/1‑149 (MQ=255) gATCGGTCCCCTCGCCCCTCTGGGGGG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaa > 4:479188/1‑149 (MQ=255) gATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaa > 3:659032/1‑149 (MQ=255) aTCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaa > 2:280899/1‑148 (MQ=255) aTCGGTCCCCTCGCCCCTCAGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAGTAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCACTTCGTGTTCCATaa > 2:81827/1‑148 (MQ=255) gcGGTCCCCTCGCCCCCATGGGGAA‑GGGGTTAGGGATAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaaa < 1:689923/147‑1 (MQ=255) ctaacccTCTCCCCAGAGGGGCG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAgg > 1:381634/5‑148 (MQ=255) taacccTCTCCCCAGAGGGGCG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGt > 2:379286/4‑148 (MQ=255) taacccTCTCCCCAGAGGGGCG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTa > 3:722052/4‑149 (MQ=255) tCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTa > 1:908689/1‑148 (MQ=255) acccTCTCCCCAGAGGGGCG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTAc > 2:587681/2‑148 (MQ=255) cccTCTCCCCAGAGGGGCG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaaa < 4:821723/142‑1 (MQ=255) ccTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCa > 3:75240/1‑101 (MQ=255) ccTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCa < 4:75240/101‑1 (MQ=255) ccTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaa > 1:907364/1‑148 (MQ=255) cTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaaaa < 3:667718/149‑1 (MQ=255) cGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAAc > 1:387282/1‑148 (MQ=255) ccccTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAg < 3:379707/97‑1 (MQ=255) ccccTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAg > 4:379707/1‑97 (MQ=255) cccTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCa > 3:119342/1‑119 (MQ=255) cccTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCa < 4:119342/119‑1 (MQ=255) cccTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGtt > 4:615293/1‑128 (MQ=255) cccTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGtt < 3:615293/128‑1 (MQ=255) cccTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAg > 4:173713/1‑149 (MQ=255) ccTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAg < 2:907364/148‑1 (MQ=255) | CACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACC‑GATCGCAACATTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAG‑AGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAG > NC_000913/3608547‑3608839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |