New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 66642171 (0.850)9 (0.050) 8/272 NT 7.3% noncoding (78/248 nt) REP6 (repetitive extragenic palindromic) element; contains 6 REP sequences REP6 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 2304955 = 65 (0.340)noncoding (539/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 206 total aligned reads displayed.

GACCATATCGTCAGCGGTCATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGACGAAACCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACG  >  NC_000913/66380‑66887
                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     
gACCATATCGTCAGCGGTCATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGTCTGTGCTTTGCTTATCCGGCCTACAAAATCGCCGCGTTTAGTCCTGATCAGACGA‑TGCAGCGTCGCATCAGGCGTTGCATGcc                                                                                                                                                                                                                                             >  1:60522/1‑273 (MQ=255)
  ccATATCGTCAGCGGTCATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGAt                                                                                                                                                                                                                                         <  2:198935/275‑1 (MQ=255)
                     gACGCTGTAATCAACGCCGGAAGGTTTGGTCACAAAGACGCCGCGCGCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGcc                                                                                                                                                                                                                      <  4:33715/275‑1 (MQ=255)
                                 tgcGCCGGAAGGTTTGATCCCAAAGACGCCGCCCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCa                                                                                                                                                                                                          <  2:342593/273‑1 (MQ=255)
                                   cGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAgc                                                                                                                                                                                                        >  2:130340/1‑275 (MQ=255)
                                                             ccgcGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGACCCAGc                                                                                                                                                                              >  2:71047/1‑275 (MQ=255)
                                                                                               aTGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAAGCCTGAAAAGAAGCGCCAGGCTCGCCACCAGCCTTGAATGCCGGaagagcgtgt                                                                                                                                            >  4:279815/1‑266 (MQ=21)
                                                                                                                  gtgtTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATGCGACGC‑TGGCGCGTCTTATCAGGC                                                                                                                                                                                                                                                       <  6:478851‑M1/149‑1 (MQ=255)
                                                                                                                   tgtTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATGCGACGC‑TGGCGCGTCTTATCAGGCc                                                                                                                                                                                                                                                      <  6:923761‑M1/149‑2 (MQ=255)
                                                                                                                     ttttGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGtt                                                                                                                                                                                                                                                    >  5:722827/1‑149 (MQ=255)
                                                                                                                       ttGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGa                                                                                                                                                                                                                                                  <  8:711147/149‑1 (MQ=255)
                                                                                                                           cAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATGCGACGCTGGC‑GCGTCTTATCAGGCctacacgct                                                                                                                                                                                                                                              <  6:596913‑M1/149‑10 (MQ=255)
                                                                                                                               gcCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGa                                                                                                                                                                                                                                          >  8:849654/1‑149 (MQ=255)
                                                                                                                                    gTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATgcgc                                                                                                                                                                                                                                     <  5:1249890/149‑1 (MQ=255)
                                                                                                                                        gCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTg                                                                                                                                                                                                                                 <  7:20764/149‑1 (MQ=255)
                                                                                                                                         cTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGc                                                                                                                                                                                                                                >  7:100613/1‑149 (MQ=255)
                                                                                                                                              aaTACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATc                                                                                                                                                                                                                           >  7:969703/1‑149 (MQ=255)
                                                                                                                                              aaTACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATc                                                                                                                                                                                                                           >  5:891040/1‑149 (MQ=255)
                                                                                                                                                   cTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGcc                                                                                                                                                                                                                      >  8:1288325/1‑149 (MQ=255)
                                                                                                                                                   cTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGAt                                                                                                                                                    >  2:111792/1‑215 (MQ=255)
                                                                                                                                                    tGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCt                                                                                                                                                                                                                     >  5:782104/1‑149 (MQ=255)
                                                                                                                                                     ggCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGa                                                                                                                                                                                                                                          <  7:1200596/127‑1 (MQ=255)
                                                                                                                                                       cGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAgcgc                                                                                                                                                                                                      >  2:292588/1‑161 (MQ=255)
                                                                                                                                                       cGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATgcgc                                                                                                                                                <  4:111792/215‑1 (MQ=255)
                                                                                                                                                        gTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGc                                                                                                                                                                                                                       >  6:1186897/1‑143 (MQ=255)
                                                                                                                                                         tttGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGcc                                                                                                                                                                                                                                             <  8:736234/120‑1 (MQ=255)
                                                                                                                                                           tGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAg                                                                                                                                                                                                  <  4:292588/161‑1 (MQ=255)
                                                                                                                                                            gagaTCTTCTAACATCTTGACACCATCGTATCGGACGCGCTTTGCTTATCCGGCCTACAAAATCGCAGTGTGTACGCCTCATAAGACGC‑ACCAGCGTCGCATCAGGCGTTGAGTGCCGGATGAACTTTGCTTATCCGGCCTACAAAATc                                                                                                                                                                                                             >  8:903935/1‑149 (MQ=14)
                                                                                                                                                             agaTCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCg                                                                                                                                                                                                            <  8:1125933/149‑1 (MQ=255)
                                                                                                                                                              gaTATTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCATGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGc                                                                                                                                                                                                           >  8:1250591/1‑149 (MQ=255)
                                                                                                                                                               aTCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCa                                                                                                                                                                                                          <  5:969761/149‑1 (MQ=255)
                                                                                                                                                               aTCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCa                                                                                                                                                                                                          <  8:527802/149‑1 (MQ=255)
                                                                                                                                                               aTCTTCTAACATGTCGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCGTGATAAGACGC‑GCCAGCATCGCATCAGGCGTTGAATGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATCGCa                                                                                                                                                                                                          <  7:903935/149‑1 (MQ=255)
                                                                                                                                                                  ttctAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTTTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGACGTTGAATGCCGGATGCGCTTTCCTTATCCGGTCTACAAACTcgccgca                                                                                                                                                                                                       >  6:282380/1‑148 (MQ=17)
                                                                                                                                                                  ttctAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAgcg                                                                                                                                                                                                       >  7:578942/1‑149 (MQ=255)
                                                                                                                                                                      aaCATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTa                                                                                                                                                                                                   <  7:327850/149‑1 (MQ=255)
                                                                                                                                                                       aCATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAg                                                                                                                                                                                                  >  7:1128017/1‑149 (MQ=255)
                                                                                                                                                                         aTGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGc                                                                                                                                                                                                <  5:1473652/149‑1 (MQ=255)
                                                                                                                                                                          tGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGcc                                                                                                                                                                                               <  5:833791/149‑1 (MQ=255)
                                                                                                                                                                          tGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGcc                                                                                                                                                                                               <  5:273058/149‑1 (MQ=255)
                                                                                                                                                                             tGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGa                                                                                                                                                                                            <  7:283585/149‑1 (MQ=255)
                                                                                                                                                                               aCTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGcgcg                                                                                                                                                                                                     <  4:199503/138‑1 (MQ=255)
                                                                                                                                                                               aCTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGCCCTGATa                                                                                                                                                                                          >  6:128424/1‑149 (MQ=255)
                                                                                                                                                                                  ccTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGa                                                                                                                                                                                       <  8:818827/149‑1 (MQ=255)
                                                                                                                                                                                  ccTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGa                                                                                                                                                                                       <  5:1376681/149‑1 (MQ=255)
                                                                                                                                                                                   cTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGAc                                                                                                                                                                                      <  6:1266716/149‑1 (MQ=255)
                                                                                                                                                                                      cGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATCGCCGCGTGTCGGCCAGATCAGCCGCGTCCTCTTCGCGTCACGCGTCACATACCGGTGTCGGCTACt                                                      >  4:161150/1‑274 (MQ=18)
                                                                                                                                                                                              aTGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTc                                                                                                                                                                           <  5:163743/149‑1 (MQ=255)
                                                                                                                                                                                               ttgcttttGCTTTTCCGGCCTACAAAATCGCAGCGTTGAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGTCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGACGaa                                            <  2:279815/270‑1 (MQ=255)
                                                                                                                                                                                                   cTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCa                                                                                                                                                                                <  8:28831/139‑1 (MQ=255)
                                                                                                                                                                                                   cTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCa                                                                                                                                                                                >  7:703877/1‑139 (MQ=40)
                                                                                                                                                                                                    tttGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGAcgc                                                                                                                                                                                    >  5:1020524/1‑134 (MQ=37)
                                                                                                                                                                                                    tttGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCa                                                                                                                                                                     >  6:149449/1‑149 (MQ=40)
                                                                                                                                                                                                     ttGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAg                                                                                                                                                                    <  6:375525/149‑1 (MQ=40)
                                                                                                                                                                                                       gCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGc                                                                                                                                                                  <  5:1126333/149‑1 (MQ=255)
                                                                                                                                                                                                        cTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCg                                                                                                                                                                 >  6:133936/1‑149 (MQ=40)
                                                                                                                                                                                                           aTCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTg                                                                                                                                                              >  6:620746/1‑149 (MQ=40)
                                                                                                                                                                                                              cGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAAt                                                                                                                                                           >  6:584655/1‑149 (MQ=255)
                                                                                                                                                                                                                   tACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTACGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCgg                                                                                                                                                      >  8:744507/1‑149 (MQ=255)
                                                                                                                                                                                                                     cAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGAt                                                                                                                                                    <  8:500537/149‑1 (MQ=255)
                                                                                                                                                                                                                      aaaaTCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATAAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGCCGCATCAGGCGTTGAATGCCGGATg                                                                                                                                                   >  8:897388/1‑149 (MQ=255)
                                                                                                                                                                                                                          tCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATgcgcg                                                                                                                                               >  6:1034805/1‑148 (MQ=255)
                                                                                                                                                                                                                          tCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCt                                                                                                                                               >  8:397580/1‑149 (MQ=255)
                                                                                                                                                                                                                            gCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGTTGCGCttt                                                                                                                                             >  8:687374/1‑149 (MQ=255)
                                                                                                                                                                                                                             cAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGa                                                                                                                                                     >  4:66816/1‑140 (MQ=255)
                                                                                                                                                                                                                              aGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGc                                                                                                                                           <  5:1310361/149‑1 (MQ=255)
                                                                                                                                                                                                                                       gCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCctacaccgctgtgaagtgctccaccccgtaggtcggataaggcggttacgccgcatcc                                                                                                                                                                                             <  8:1394392‑M1/90‑59 (MQ=255)
                                                                                                                                                                                                                                       gCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGc                                                                                                                                  <  5:1476877/149‑1 (MQ=255)
                                                                                                                                                                                                                                        ccTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGcc                                                                                                                                 >  5:1205865/1‑149 (MQ=255)
                                                                                                                                                                                                                                         cTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATTCCGGATGCGCTTAGCTTACCCGGCCt                                                                                                                                >  8:924388/1‑149 (MQ=255)
                                                                                                                                                                                                                                          tGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATTCCGGATGCGCTTTGCTTATCCGGCCTACCACATCGCAACGTGTAGCCCAGCTCAGACGCGTCAGCGCCGCATCAGGCTTTACATTCCGGACTCCGCGACTTAGCTACGCAACCCGTAATACACCTCGTTCCCACGCAACGCCTCTTTaaagt  >  4:135434/1‑272 (MQ=18)
                                                                                                                                                                                                                                           gATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCGTTGCTTATCCGGCCTAc                                                                                                                              >  6:655287/1‑149 (MQ=255)
                                                                                                                                                                                                                                            aTAAGACGC‑GCCAGCGTCGCATCAGGCcaacaccgctgtgaagtgctccaccccgtaggttggataaggcggttacgccgcatccaa                                                                                                                                                                                           <  5:1267766‑M1/87‑61 (MQ=255)
                                                                                                                                                                                                                                              aaGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGAt                                                                                                                                                                                           >  7:770433/1‑85 (MQ=39)
                                                                                                                                                                                                                                              aaGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACaaa                                                                                                                           >  7:1386305/1‑149 (MQ=255)
                                                                                                                                                                                                                                               aGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACaaaa                                                                                                                          >  6:852781/1‑149 (MQ=255)
                                                                                                                                                                                                                                                gACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATcc                                                                                                                                     >  6:695816/1‑137 (MQ=255)
                                                                                                                                                                                                                                                gACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAAt                                                                                                                         >  5:471449/1‑149 (MQ=255)
                                                                                                                                                                                                                                                 aCGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATc                                                                                                                        <  6:1406807/149‑1 (MQ=255)
                                                                                                                                                                                                                                                   gc‑gcCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGc                                                                                                                      <  8:791419/149‑1 (MQ=255)
                                                                                                                                                                                                                                                    c‑gcCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGGTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCa                                                                                                                     <  6:1322353/149‑1 (MQ=255)
                                                                                                                                                                                                                                                    c‑gcCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCa                                                                                                                     <  5:510455/149‑1 (MQ=255)
                                                                                                                                                                                                                                                       ccAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGc                                                                                                                   <  6:78510/149‑1 (MQ=255)
                                                                                                                                                                                                                                                             tCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAg                                                                                                             <  8:191819/149‑1 (MQ=255)
                                                                                                                                                                                                                                                             tCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAg                                                                                                             <  8:1058121/149‑1 (MQ=255)
                                                                                                                                                                                                                                                              cGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAgg                                                                                                            <  6:221706/149‑1 (MQ=255)
                                                                                                                                                                                                                                                               gCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGc                                                                                                           >  7:1351803/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                cATCAGGAGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACACAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGcc                                                                                                          <  7:1256035/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                 ctcAGGCctacaccgctgtgaagtgctccaccccgtaggttggataaggcggttacgccgcatccaacatctaacgcccgagccggttgcctgatgcgacgctggcgcgtcttatcagcatacgccacatccggcatggtatgccggat                                                                                                         <  6:1458474‑M1/148‑143 (MQ=255)
                                                                                                                                                                                                                                                                 aTCAGGCctacaccgctgtgaagtgctccaccccgtaggttggataaggcggttacgccgcatccaacatctaacgcccgagccggttgcctgatgcgacgctggcgcgtcttatcagcatacgccacatccggcatggtatgccggat                                                                                                         <  5:1411128‑M1/149‑143 (MQ=255)
                                                                                                                                                                                                                                                                 aTCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCa                                                                                                         >  6:968043/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                 aTCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCa                                                                                                         >  6:292632/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                 aTCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCa                                                                                                         >  5:1339820/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                    aGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGAt                                                                                                      <  5:292632/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGcc                                                                                                                                                                                 >  6:1049470/1‑72 (MQ=255)
                                                                                                                                                                                                                                                                      gCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGcc                                                                                                                                                                                 <  5:1049470/72‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATaa                                                                                                    >  5:695140/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                      gCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATaa                                                                                                    <  5:584655/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATaa                                                                                                    <  6:782104/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATaa                                                                                                    >  6:880497/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     
GACCATATCGTCAGCGGTCATGACGCTGTAATCGACGCCGGAAGGTTTGATCACAAAGACGCCGCGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGC‑GCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGACGAAACCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACG  >  NC_000913/66380‑66887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.