| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,439,588 | G→C | 9.1% | intergenic (‑79/+28) | yhdN ← / ← rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,439,588 | 0 | G | C | 9.1% | 703.9 / 50.9 | 209 | intergenic (‑79/+28) | yhdN/rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| Reads supporting (aligned to +/- strand): ref base G (98/91); new base C (8/11); total (106/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.82e-01 | |||||||||||
Only 100 of 217 total aligned reads displayed.
CTCCGTTGCTCAAGTTCTGGCGGTAAGCAACCGGCATTCTTCAGCAAGCGATACCCCGCACGTAATTCCGGTGGCACGTGAGAATCATCATCCAGTATCAATGGTTCGCCGCTACCTGCCAGGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTACGGGCGAATGCCAGACGACGATTAGCAACGCTATCAGTCTTGGCAAGAGTAATCAGCGGCTCAAC > NC_000913/3439319‑3439858 | cTGCCAGGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCAGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAg < 2:59593/275‑1 (MQ=255) ggTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTACTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACcc‑gccg > 5:1197738/1‑149 (MQ=255) gTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCgg > 7:379228/1‑149 (MQ=255) cAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCgg < 5:1098989/149‑1 (MQ=255) aaCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATCGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGt > 8:778663/1‑149 (MQ=255) aCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCCCGGCGGGtt < 8:902350/149‑1 (MQ=255) cTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttt < 6:460829/149‑1 (MQ=255) cTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttt > 8:719607/1‑149 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGtttt < 5:1078444/149‑1 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCCCGGCGGGtttt < 7:762041/149‑1 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCCCGGCGGGtttt < 5:838599/149‑1 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCCCGGCGGGtttt < 5:469570/149‑1 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGATCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGtttt < 5:1125816/149‑1 (MQ=255) cACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttttt < 7:318181/149‑1 (MQ=255) cACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttttt > 8:1398247/1‑149 (MQ=255) cACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttttt < 5:401683/149‑1 (MQ=255) cACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttttt > 5:24057/1‑149 (MQ=255) cACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttttt < 6:351205/149‑1 (MQ=255) ttCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGCAGCCACACTTCAGAATACGAGTGTAACCACCGGCa > 2:223964/1‑274 (MQ=255) cTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGa < 7:719607/149‑1 (MQ=255) cTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGa < 7:981198/149‑1 (MQ=255) tCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCCGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGa > 1:38684/1‑272 (MQ=255) cTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTActc < 7:177303/149‑1 (MQ=255) cTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTActc < 5:14559/149‑1 (MQ=255) atGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgca < 6:1126672/149‑1 (MQ=255) ggCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgcagc > 6:221363/1‑149 (MQ=255) ggCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgcagc < 6:1149091/149‑1 (MQ=255) ctctGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTGGGTAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTc > 2:93185/1‑274 (MQ=255) tctGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCtt < 5:568423/149‑1 (MQ=255) cACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCtt > 7:1187123/1‑149 (MQ=255) cACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCtt > 8:1235083/1‑149 (MQ=255) tGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtct < 6:27656/149‑1 (MQ=255) tGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtct > 5:516620/1‑149 (MQ=255) gTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTctct > 8:1123067/1‑149 (MQ=255) tCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTg > 6:442696/1‑149 (MQ=255) aaGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGaa > 5:1439933/1‑149 (MQ=255) aGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAAc < 6:590057/149‑1 (MQ=255) aGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAAc < 6:412020/149‑1 (MQ=255) tAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGa < 6:516620/149‑1 (MQ=255) aaCCACATAAATACTCGAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGAt < 7:64991/149‑1 (MQ=255) aCCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATc > 5:626978/1‑149 (MQ=255) aTACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCCCGGCGGGTTTTTTTatac > 8:1262892/1‑92 (MQ=38) cTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGAt < 8:272505/149‑1 (MQ=255) tCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGa < 5:711181/100‑1 (MQ=255) tCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGa > 6:711181/1‑100 (MQ=255) tCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATg > 7:1432292/1‑149 (MQ=255) tCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATg > 7:1274686/1‑149 (MQ=255) cAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAg > 2:128004/1‑151 (MQ=255) cAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCCCACTTCAGAATACCACTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTCAACACTTTTGCCCCGTTCTCGTTATCACGGGt > 2:252068/1‑275 (MQ=255) aGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTaa < 5:1285295/149‑1 (MQ=255) aGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTaa < 5:1227894/149‑1 (MQ=255) ggggATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTa < 6:1312059/99‑1 (MQ=255) gATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCa > 7:182526/1‑149 (MQ=255) tGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑c > 1:11011/1‑212 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAAc > 7:1392809/1‑127 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgc > 8:438729/1‑149 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgc > 8:1391810/1‑149 (MQ=255) aaaaaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcgc > 7:1235929/1‑149 (MQ=255) aaaaaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcgc > 6:180528/1‑149 (MQ=255) aaaaaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcgc > 7:1021446/1‑149 (MQ=255) aaaaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCt > 8:865825/1‑107 (MQ=255) aaaaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCt < 7:865825/107‑1 (MQ=255) aaaaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGcgcg > 5:940856/1‑149 (MQ=255) aaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGtt < 8:379228/149‑1 (MQ=255) cAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCt < 5:1056066/149‑1 (MQ=255) cAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCt < 6:451117/149‑1 (MQ=255) aGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTg > 8:804117/1‑149 (MQ=255) tATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCAc < 6:668778/149‑1 (MQ=255) tttAGGTAAGTTGGGGATATCCCGGGT‑TAAAAAAACCCGGCCGGGTCGGGTTTTTTTCCGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTACGGGCGAATGCCAGACGACGATTAGc < 4:83611/272‑1 (MQ=255) gATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACTATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGcc > 7:1364724/1‑149 (MQ=255) tAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACg > 4:158724/1‑237 (MQ=255) g‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACt > 7:596301/1‑149 (MQ=255) tGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTa < 2:158724/237‑1 (MQ=255) ggggATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTc > 8:1325902/1‑149 (MQ=255) gATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTTAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGa > 5:387140/1‑149 (MQ=255) gATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGa > 5:207212/1‑149 (MQ=255) gATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGa > 5:218520/1‑149 (MQ=255) gATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCCCGAGTACGGGCGAATGCCAGACGACGATTAGCACAGCTATCAGTCtt > 2:323696/1‑274 (MQ=255) aTACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCcac > 3:72139/1‑140 (MQ=255) aTACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCCCGGCC‑‑CGCGAAACGCGGGCCCAGTTCGTTCAACCGTTTTGCCACGATCCCGGTATCCCGGGTCAGGGCGAAAGCGAGACGACGATTAGACACGccaatcggcttgg > 4:135376/1‑263 (MQ=255) actacGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATa < 6:99768/149‑1 (MQ=255) tacGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACg < 8:639298/149‑1 (MQ=255) acGGGTATAAAAAAACCC‑GCCGGGGCGGGCTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAATCCATCGGCGCGTTTTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCC‑‑ATCGAAACGCGGGCCCAGTTCGTTAAAACGTTTCGCCCCGATCTCGTTTTCCCTGTTTAGGGACAATGCCCGAAGCCGCTTCACAAAGCTATCAGCCTTGGCAag > 4:35444/1‑274 (MQ=255) gggTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgt > 7:268424/1‑149 (MQ=255) gggTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgt < 8:527636/149‑1 (MQ=255) tataAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTa > 6:1280868/1‑149 (MQ=255) acaaaaaCCC‑GCCTGGTCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGCTCAACCAGCTCGTTGTAAGCCATCGGCGCGTTGTGGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCCCGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTACGGGCGAATGCCAGATGACGATTAGCaa < 4:46455/245‑1 (MQ=255) aaaaaCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccac > 6:1029184/1‑149 (MQ=255) aaaaaCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccac > 6:1468841/1‑149 (MQ=255) aaaaCCC‑GCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCa < 8:400765/130‑1 (MQ=255) aaaaCCC‑GCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCa > 7:400765/1‑130 (MQ=255) aaaCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGAt < 8:297193/85‑1 (MQ=255) aaaCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCg < 7:804117/149‑1 (MQ=255) aaaCCC‑GCCCCGGCGGGTTTTTTTATGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgt < 6:1221837/139‑1 (MQ=255) aaaCCC‑GCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCg > 6:344328/1‑149 (MQ=255) aCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTaa < 8:1072547/141‑1 (MQ=255) aCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTaa > 7:1072547/1‑141 (MQ=255) aCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTACGGGCGAATGCCAGACGACGATTAGCAACGCTATCAGTCTTGGCAAGAGTAATCAGCGGCt > 2:176469/1‑274 (MQ=255) ccc‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCTCGCGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTAc > 4:22405/1‑215 (MQ=255) gccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATa < 2:48998/128‑1 (MQ=255) | CTCCGTTGCTCAAGTTCTGGCGGTAAGCAACCGGCATTCTTCAGCAAGCGATACCCCGCACGTAATTCCGGTGGCACGTGAGAATCATCATCCAGTATCAATGGTTCGCCGCTACCTGCCAGGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTACGGGCGAATGCCAGACGACGATTAGCAACGCTATCAGTCTTGGCAAGAGTAATCAGCGGCTCAAC > NC_000913/3439319‑3439858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |