| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,439,589 | G→C | 8.9% | intergenic (‑80/+27) | yhdN ← / ← rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,439,589 | 0 | G | C | 8.9% | 721.1 / 50.1 | 214 | intergenic (‑80/+27) | yhdN/rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| Reads supporting (aligned to +/- strand): ref base G (100/95); new base C (8/11); total (108/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.56e-01 | |||||||||||
Only 100 of 216 total aligned reads displayed.
CTCCGTTGCTCAAGTTCTGGCGGTAAGCAACCGGCATTCTTCAGCAAGCGATACCCCGCACGTAATTCCGGTGGCACGTGAGAATCATCATCCAGTATCAATGGTTCGCCGCTACCTGCCAGGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTACGGGCGAATGCCAGACGACGATTAGCAACGCTATCAGTCTTGGCAAGAGTAATCAGCGGCTCAACTA > NC_000913/3439319‑3439860 | cTGCCAGGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCAGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAg < 2:59593/275‑1 (MQ=255) gTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCgg > 7:379228/1‑149 (MQ=255) aTCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGc < 8:276732/149‑1 (MQ=255) cAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCgg < 5:1098989/149‑1 (MQ=255) aaCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATCGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGt > 8:778663/1‑149 (MQ=255) aCTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCCCGGCGGGtt < 8:902350/149‑1 (MQ=255) cTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttt > 8:719607/1‑149 (MQ=255) cTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttt < 6:460829/149‑1 (MQ=255) cTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCCCGGCGGGttt < 5:317864/149‑1 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGtttt < 5:1078444/149‑1 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGtttt < 5:652472/149‑1 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCCCGGCGGGtttt < 7:762041/149‑1 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCCCGGCGGGtttt < 5:838599/149‑1 (MQ=255) tCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGATCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGtttt < 5:1125816/149‑1 (MQ=255) cACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttttt < 7:318181/149‑1 (MQ=255) cACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttttt < 5:401683/149‑1 (MQ=255) cACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGttttt > 8:1398247/1‑149 (MQ=255) aCCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGtttttt > 5:535431/1‑149 (MQ=255) ttCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGCAGCCACACTTCAGAATACGAGTGTAACCACCGGCa > 2:223964/1‑274 (MQ=255) ttGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCt > 6:774782/1‑149 (MQ=255) cTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGa < 7:981198/149‑1 (MQ=255) tCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCCGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGa > 1:38684/1‑272 (MQ=255) gCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTAct > 7:727714/1‑149 (MQ=255) cTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTActc < 7:177303/149‑1 (MQ=255) cTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTActc < 7:1327187/149‑1 (MQ=255) tGGCGCTGTGCCCACTGGTCAAGTAACCACAGAAATACTCCAGGGAATAAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCa < 2:23607/275‑1 (MQ=255) ggCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTgcagc > 6:1092747/1‑149 (MQ=255) ctctGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTGGGTAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTc > 2:93185/1‑274 (MQ=255) cACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCtt > 5:212338/1‑149 (MQ=255) cACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCtt > 7:1187123/1‑149 (MQ=255) cACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCtt > 8:1235083/1‑149 (MQ=255) cACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCtt > 5:99768/1‑149 (MQ=255) tGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTtct < 6:27656/149‑1 (MQ=255) tCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTg > 6:167820/1‑149 (MQ=255) aGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAAc < 6:590057/149‑1 (MQ=255) tAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGa < 6:516620/149‑1 (MQ=255) aaaTACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGc > 7:288433/1‑149 (MQ=255) aTACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCCCGGCGGGTTTTTTTatac > 8:1262892/1‑92 (MQ=38) aTACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCCCGGCGGGTTTTTTTatac < 7:1262892/95‑4 (MQ=255) tCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGa < 5:711181/100‑1 (MQ=255) tCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATg > 7:1432292/1‑149 (MQ=255) cAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAg > 2:128004/1‑151 (MQ=255) aGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTaa < 6:212338/149‑1 (MQ=255) aGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTaa < 5:574820/149‑1 (MQ=255) aGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTaa < 5:1285295/149‑1 (MQ=255) ggATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGcc > 8:1160582/1‑149 (MQ=255) tGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑c > 1:11011/1‑212 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAAc > 7:1392809/1‑127 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgc > 8:1391810/1‑149 (MQ=255) aCAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgc > 8:438729/1‑149 (MQ=255) aaaaaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGgcgc > 7:1021446/1‑149 (MQ=255) aaaaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCt < 7:865825/107‑1 (MQ=255) aaaaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCt > 8:865825/1‑107 (MQ=255) aaaaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGcgcg > 6:235938/1‑149 (MQ=255) aaGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGtt < 8:379228/149‑1 (MQ=255) aCAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGc > 6:351430/1‑98 (MQ=255) cAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCt < 6:451117/149‑1 (MQ=255) aGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTg > 8:804117/1‑149 (MQ=255) aGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTg > 5:1282899/1‑149 (MQ=255) aGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTg < 5:1455598/149‑1 (MQ=255) tATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCAc < 5:167820/149‑1 (MQ=255) tttAGGTAAGTTGGGGATATCCCGGGT‑TAAAAAAACCCGGCCGGGTCGGGTTTTTTTCCGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTACGGGCGAATGCCAGACGACGATTAGc < 4:83611/272‑1 (MQ=255) gATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACTATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGcc > 7:1364724/1‑149 (MQ=255) aTAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCca < 6:448804/149‑1 (MQ=255) tAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACg > 4:158724/1‑237 (MQ=255) g‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACt > 7:596301/1‑149 (MQ=255) tGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTa < 2:158724/237‑1 (MQ=255) ggggATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTc > 8:1325902/1‑149 (MQ=255) gggATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCa < 8:63946/149‑1 (MQ=255) gggATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTTCCACGAACTCGTTATCACGGATACGGGCGAATTCCAGACGACCATTAGAAACGCtctacgtgt > 4:97517/1‑267 (MQ=255) gATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTTAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGa > 5:387140/1‑149 (MQ=255) gATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCCCGAGTACGGGCGAATGCCAGACGACGATTAGCACAGCTATCAGTCtt > 2:323696/1‑274 (MQ=255) aTACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCcac > 3:72139/1‑140 (MQ=255) actacGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATa < 6:99768/149‑1 (MQ=255) ctacGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATAc > 7:259826/1‑149 (MQ=255) acGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGAAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGa < 5:222936/149‑1 (MQ=255) acGGGTATAAAAAAACCC‑GCCGGGGCGGGCTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAATCCATCGGCGCGTTTTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCC‑‑ATCGAAACGCGGGCCCAGTTCGTTAAAACGTTTCGCCCCGATCTCGTTTTCCCTGTTTAGGGACAATGCCCGAAGCCGCTTCACAAAGCTATCAGCCTTGGCAag > 4:35444/1‑274 (MQ=255) gggTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgt < 8:527636/149‑1 (MQ=255) tataAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTa > 6:1280868/1‑149 (MQ=255) acaaaaaCCC‑GCCTGGTCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGCTCAACCAGCTCGTTGTAAGCCATCGGCGCGTTGTGGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCCCGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTACGGGCGAATGCCAGATGACGATTAGCaa < 4:46455/245‑1 (MQ=255) aaaaaaCCC‑GCCGGGGCGGGGTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAacca > 6:1367314/1‑149 (MQ=255) aaaaCCC‑GCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCa > 7:400765/1‑130 (MQ=255) aaaaCCC‑GCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCa < 8:400765/130‑1 (MQ=255) aaaaCCC‑GCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccacc > 6:1167465/1‑149 (MQ=255) aaaaCCC‑GCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccacc > 6:683359/1‑149 (MQ=255) aaaaCCC‑GCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAaccacc > 6:423021/1‑149 (MQ=255) aaaCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGAt < 8:297193/85‑1 (MQ=255) aaaCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCg < 7:804117/149‑1 (MQ=255) aaaCCC‑GCCCCGGCGGGTTTTTTTATGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgt < 6:1221837/139‑1 (MQ=255) aaaCCC‑GCCCCGGCGGGTTTTTTTATGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgt > 5:1221837/1‑139 (MQ=255) aaaCCC‑GCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAgt < 7:706324/139‑1 (MQ=255) aaaCCC‑GCCCCGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCg > 6:344328/1‑149 (MQ=255) aaCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCgg < 5:473865/149‑1 (MQ=255) aCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTaa < 8:1072547/141‑1 (MQ=255) aCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTaa > 7:1072547/1‑141 (MQ=255) aCCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTACGGGCGAATGCCAGACGACGATTAGCAACGCTATCAGTCTTGGCAAGAGTAATCAGCGGCt > 2:176469/1‑274 (MQ=255) ccc‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCTCGCGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTAc > 4:22405/1‑215 (MQ=255) cc‑gccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCAc > 6:1141474/1‑149 (MQ=255) gccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATa < 2:48998/128‑1 (MQ=255) ccgGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGCGCCAGTTATCCCGAGTACGGGCGACAGCCAGACCACGCATAGCAACGGTCTCAGTTTTGGCGAACGTAAACGGCGGAGCAAcca > 4:130997/1‑273 (MQ=255) | CTCCGTTGCTCAAGTTCTGGCGGTAAGCAACCGGCATTCTTCAGCAAGCGATACCCCGCACGTAATTCCGGTGGCACGTGAGAATCATCATCCAGTATCAATGGTTCGCCGCTACCTGCCAGGTTATCAAACTCACCTTTCGCTTGCGCTTCTGCTATATGGCGCTCTGCCCACTGGTCAAGTAACCACATAAATACTCCAGGGGATGAACAAAAAGAGTACAGCTATTGTAGATAAG‑TGGGGATACTACGGGTATAAAAAAACCC‑GCCGGGGCGGGTTTTTTTACGTTGCTTCAGATTACTCTGCAGCAGCTTCTGCTTTCTCTGAACGATCAACCAGCTCGATGTAAGCCATCGGCGCGTTGTCGCCTGCACGGAAGCCACACTTCAGAATACGAGTGTAACCACCGGCACGGCT‑‑CGCGAAACGCGGGCCCAGTTCGTTAAACAGTTTTGCCACGATCTCGTTATCACGAGTACGGGCGAATGCCAGACGACGATTAGCAACGCTATCAGTCTTGGCAAGAGTAATCAGCGGCTCAACTA > NC_000913/3439319‑3439860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |