| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 533,849 | G→A | 5.4% | intergenic (+23/‑67) | allR → / → gcl | glyoxylate‑inducible transcriptional repressor of all and gcl operons/glyoxylate carboligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 533,849 | 0 | G | A | 5.4% | 815.2 / 24.4 | 254 | intergenic (+23/‑67) | allR/gcl | glyoxylate‑inducible transcriptional repressor of all and gcl operons/glyoxylate carboligase |
| Reads supporting (aligned to +/- strand): ref base G (124/115); new base A (7/7); total (131/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.24e-03 | |||||||||||
Only 100 of 256 total aligned reads displayed.
TGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGTCATG‑TGGAAGGTGCTTCGCACATGGCGGAAGGTTATACCCGCGCAACGGCAGG > NC_000913/533588‑534115 | ggCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATATCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCACGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTTACAGTTGGAAAAAtttt > 2:105192/1‑275 (MQ=255) tggATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGGGTTGTTGTCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCaataaata < 1:5519/273‑1 (MQ=255) tAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGCTCGTTTTGTCAGTCAGGGTGAGCTGGTAAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCCCATCCATAATGTCTGTCGCCTCCACCCCTGCGGAGCGGG‑TTTTTGTGAAAACATTTGAACGTTGGAAAATTTTTCCaatgaata > 4:81140/1‑275 (MQ=255) aaaGAGGAGGATGTTGTAGGTCTGAATTGAAAAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGAACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAgg < 2:187927/274‑1 (MQ=255) gTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGT‑TTTTTTTGACATAATTTGAAAGTTGGAAAAATTTTCCAATACATAGGGGTAGGAATAAACTGGCaaaa > 2:338357/1‑274 (MQ=255) aaTTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGCACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAACAATTTTCCAATAAATAGAGGCAGAGAAAAAATGGCaaaacggagg > 4:272279/1‑269 (MQ=255) cATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAAttt > 1:9168/1‑230 (MQ=255) gCTTAAACAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCCTCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCa < 3:9168/230‑1 (MQ=255) tttCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGAc < 2:303425/273‑1 (MQ=255) atttttgttgCCCCTATCGCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGagaaagaa < 4:12025/271‑1 (MQ=255) ttgttgCCACTATCACCATCGCCGGGCCTTCATCAAGACTGAAAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGAGATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGATCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTGCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGt < 2:239035/274‑1 (MQ=255) cGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGa > 5:675393/1‑149 (MQ=255) gCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAg > 8:27694/1‑149 (MQ=255) gCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑ttttt > 4:162716/1‑158 (MQ=255) gCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGATGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAg > 7:911750/1‑149 (MQ=255) atctccatctccGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCgg < 6:243091/149‑1 (MQ=255) tctccatctccGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGa < 2:162716/158‑1 (MQ=255) ccatctccGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑ttt < 6:137615/149‑1 (MQ=255) ctccGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑ttttttt < 7:60230/149‑1 (MQ=255) ctccGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑ttttttt < 5:997742/149‑1 (MQ=255) ctccGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑ttttttt < 8:1166989/149‑1 (MQ=255) ccGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGa < 5:175624/149‑1 (MQ=255) gCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACaaa > 6:1325161/1‑149 (MQ=255) cTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAAt > 7:317579/1‑149 (MQ=255) tcaAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGaa > 6:1163896/1‑149 (MQ=255) tcaAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGaa > 6:1442971/1‑149 (MQ=255) gACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGtt < 6:626502/149‑1 (MQ=255) aCAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATTTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTTTTCCGGGAGCTGCaaacaatcgt > 4:314621/1‑273 (MQ=255) cAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGaaaa > 8:1039100/1‑149 (MQ=255) gaagaTCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAAt < 7:1100516/149‑1 (MQ=255) aTCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTgg > 6:731643/1‑139 (MQ=255) aTCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTc < 8:1020515/149‑1 (MQ=255) tCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTcc < 5:265909/149‑1 (MQ=255) gTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCaa > 5:572620/1‑149 (MQ=255) tGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCaataaa < 8:827552/149‑1 (MQ=255) cagtcagGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATag < 7:458519/149‑1 (MQ=255) agtcagGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATaga < 7:85236/149‑1 (MQ=255) gtcagGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATagag > 6:824588/1‑149 (MQ=255) tcagGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTAGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCACTAAATAGAgg > 8:631593/1‑149 (MQ=255) cagGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGt < 5:532752/149‑1 (MQ=255) agGGTGAGCTGGTCGGAGACACCGCCCGCGATATCAGCACGGCGTGGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAAGAGAGGTa > 8:1364315/1‑149 (MQ=255) cTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATaaa > 5:1088209/1‑149 (MQ=255) gTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGa < 6:392556/96‑1 (MQ=255) gagaCACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCaa > 8:440248/1‑149 (MQ=255) agaCACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCaaa > 5:809132/1‑149 (MQ=255) agaCACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCaaa > 5:1235756/1‑149 (MQ=255) agaCACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCaaa > 8:471480/1‑149 (MQ=255) acCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATg > 5:856907/1‑149 (MQ=255) ccgcccgcGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATga < 5:1357903/149‑1 (MQ=255) ccgcccgcGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGAGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATga < 6:1235756/149‑1 (MQ=255) cgcgATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGcc < 5:539970/149‑1 (MQ=255) gcgATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCg > 7:838799/1‑149 (MQ=255) gATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGtt < 7:471480/149‑1 (MQ=255) tCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAg < 5:326424/117‑1 (MQ=255) tCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGAcg > 6:1073028/1‑149 (MQ=255) cAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGAcgc < 5:1332280/149‑1 (MQ=255) aGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGAcgcg > 5:932336/1‑149 (MQ=255) ggCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCGCTGCGGAGCGGGTTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGTCATG‑TGGAAg < 2:97811/275‑1 (MQ=255) gggACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAACAATGAGAGCCGTTGACGCGGCAatgtatgt > 7:1450075/1‑149 (MQ=255) gACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGc < 8:1413519/138‑1 (MQ=255) gACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGc > 7:1413519/1‑138 (MQ=255) aCTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCGATGTATGTGCt > 8:150033/1‑149 (MQ=255) aCTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCt > 6:1085057/1‑149 (MQ=255) tGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTgg > 8:59684/1‑149 (MQ=255) tGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTgg > 6:1312144/1‑149 (MQ=255) tGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTgg < 8:1133743/149‑1 (MQ=255) gAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGtt > 2:357119/1‑180 (MQ=255) gCACATCCATAATGTCTTTCGCNTCCCNCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCgg < 4:357119/180‑1 (MQ=255) caTCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGagaaagaa < 7:1027763/149‑1 (MQ=255) caTCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGagaaagaa < 5:602504/149‑1 (MQ=255) caTCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCaatcaatc > 2:64884/1‑192 (MQ=255) caTCCATAATGTCTGGCGCATCCCGCGCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGGTGACGCGGCAAGGTAGGTGCTGGaggaagaa < 6:254863/149‑1 (MQ=255) aTCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAaagaag > 7:19932/1‑149 (MQ=255) aTCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAaagaag < 6:455110/149‑1 (MQ=255) tCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAAtttt > 8:260060/1‑72 (MQ=255) cATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATagag < 7:1275607/83‑1 (MQ=255) cATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATagag > 8:1275607/1‑83 (MQ=255) tAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATc > 6:809210/1‑149 (MQ=255) aaTGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGaa < 5:814195/87‑1 (MQ=255) aTGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCAc < 8:16690/149‑1 (MQ=255) tctgtcGCATCCCGCTCTGCGGAGCGTG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTAc < 7:95150/149‑1 (MQ=255) tgtcGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCTTCATG‑TGGAAGGTGCTTCGCACATGGCGGAAGGTTATACCcgcg > 2:205814/1‑275 (MQ=255) aaaaaaacccGCTCCGCAGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGc > 7:258723/8‑149 (MQ=255) tcGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGTCATG‑TGGAAGGTGCTTCGCACATGGCGGAAGGTTATACCCgcgcc > 1:50612/1‑274 (MQ=255) tcGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATAACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGAACGGCGGTAATCGTCAAATTCTGGCGCG‑CACGCTGGAAGGTGCTTGCCACATGGGGGAAGATGAGACCGgcgc > 4:227036/1‑274 (MQ=255) gCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATgag < 3:62556/95‑1 (MQ=255) aaacccGCTCCGCAGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTc > 7:758017/4‑149 (MQ=255) aTCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCg < 6:856907/149‑1 (MQ=255) aTCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCg > 8:291050/1‑149 (MQ=255) tCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCgg < 6:989215/149‑1 (MQ=255) tCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAG‑‑AGAAGGTATCACTACCGCCTTCGgtg < 6:561053/149‑1 (MQ=255) acccGCTCCGCAGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATagag < 5:235380/66‑1 (MQ=39) cccGCTCCGCAGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGACTTCGgt < 8:758017/149‑1 (MQ=255) ccGCTCCGCAGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGgtg > 7:719281/1‑149 (MQ=255) cgtgctGGGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAAGAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGTCATG‑TGGAAGGTGCTTCGCACATGGCGGAAGGTTATACCCGCGCAACGGCAgg < 4:205814/271‑1 (MQ=255) tctGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTcc > 6:1965/1‑149 (MQ=255) tGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCgg > 5:126611/1‑149 (MQ=255) gCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCggg > 5:1035550/1‑149 (MQ=255) cGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGa < 6:539119/149‑1 (MQ=255) cGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGa < 8:89451/149‑1 (MQ=255) | TGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGG‑TTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGTCATG‑TGGAAGGTGCTTCGCACATGGCGGAAGGTTATACCCGCGCAACGGCAGG > NC_000913/533588‑534115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |