| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,543,231 | A→C | 6.5% | M277R (ATG→AGG) ‡ | narU ← | nitrate/nitrite transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,543,231 | 0 | A | C | 6.5% | 541.0 / 24.1 | 154 | M277R (ATG→AGG) ‡ | narU | nitrate/nitrite transporter |
| Reads supporting (aligned to +/- strand): ref base A (72/72); new base C (2/8); total (74/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.71e-01 | |||||||||||
Only 100 of 159 total aligned reads displayed.
CATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATCCCTGACCATGC > NC_000913/1543083‑1543379 | cATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCa > 1:15320/1‑149 (MQ=255) aTAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGGTTTTTTGCCAGCa > 4:571790/1‑149 (MQ=255) aTAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCAt > 2:706042/1‑149 (MQ=255) aTAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCAt > 3:1318487/1‑149 (MQ=255) tAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATg < 3:1431647/149‑1 (MQ=255) tAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATg > 1:659338/1‑149 (MQ=255) aaaTAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑a > 1:618973/1‑149 (MQ=255) aaTAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCATGCTGGC‑aa > 3:784930/1‑149 (MQ=255) tAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑aaaa < 2:618973/149‑1 (MQ=255) tAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑‑TTTTGCCATGCTGGC‑aaaaa < 2:134372/149‑2 (MQ=255) aaaGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCATGCTGGC‑aaaaa < 4:784930/149‑2 (MQ=255) aaaGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCATGCTGGC‑aaaaa < 1:238393/149‑2 (MQ=255) gTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑‑TTTTGCCATGCTGGC‑AAAAaccca < 4:1098635/149‑3 (MQ=255) ttGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCGCCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGc > 2:962609/1‑149 (MQ=255) ttGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGc < 1:1097886/149‑1 (MQ=255) ttGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGc > 1:1367679/1‑149 (MQ=255) ttGATCAACGTCACCCGCACGCCACCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGc < 3:1314691/149‑1 (MQ=255) cAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGaaa < 2:1300603/149‑1 (MQ=255) aaCGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGaaaa > 1:486329/1‑149 (MQ=255) aCGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAAccc < 1:1363504/140‑1 (MQ=255) gTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAAcc > 4:748098/1‑149 (MQ=255) gTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAAcc > 2:923421/1‑149 (MQ=255) aCCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGAt > 3:167628/1‑149 (MQ=255) cGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGa < 1:214885/145‑1 (MQ=255) cgccgcCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGaa < 4:610515/149‑1 (MQ=255) gccgccGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAAc < 3:193140/149‑1 (MQ=255) gAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAgg < 1:1192196/149‑1 (MQ=255) gAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAgg < 2:807928/149‑1 (MQ=255) aaCTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGt < 3:151678/149‑1 (MQ=255) aCTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACAAACCGAAGGTg < 3:962052/149‑1 (MQ=255) ttATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGc > 2:1173096/1‑149 (MQ=255) tCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAg > 1:853960/1‑149 (MQ=255) gAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTa > 4:739490/1‑149 (MQ=255) gAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTa > 3:371218/1‑149 (MQ=255) gAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTa > 4:1165860/1‑149 (MQ=255) aTAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAg < 4:1328553/149‑1 (MQ=255) tAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGc < 3:748098/149‑1 (MQ=255) aGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCa > 1:1409117/1‑149 (MQ=255) gCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAg > 4:809994/1‑149 (MQ=255) caccacCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAgg > 2:1123757/1‑149 (MQ=255) accaccAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGc > 1:1222846/1‑149 (MQ=255) ccaccaACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCt > 2:685965/1‑149 (MQ=255) accaACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTca < 2:486329/149‑1 (MQ=255) caACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTcagc > 3:711920/1‑149 (MQ=255) aaCCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTcagca > 4:1415303/1‑149 (MQ=255) cgaccgCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGcc < 4:1307425/149‑1 (MQ=255) accgCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCag < 2:763372/149‑1 (MQ=255) ccgCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCaga < 2:721663/149‑1 (MQ=255) gcgcgATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAgaga < 2:437057/149‑1 (MQ=255) cgcgATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGAt < 3:410264/149‑1 (MQ=255) cACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGt < 2:265173/149‑1 (MQ=255) aCCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGtt > 1:202359/1‑149 (MQ=255) ccGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTg > 2:656768/1‑149 (MQ=255) ccGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTg > 1:554781/1‑149 (MQ=255) ccGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTg < 3:172363/149‑1 (MQ=255) cGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCagag > 1:860495/1‑136 (MQ=255) cGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGt < 4:1093520/149‑1 (MQ=255) gATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATaaa < 1:1157276/93‑1 (MQ=255) gATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATaaa > 2:1157276/1‑93 (MQ=255) gATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTa > 2:810483/1‑149 (MQ=255) gATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTa > 4:339388/1‑149 (MQ=255) aTAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTaa < 2:1367679/149‑1 (MQ=255) aTAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTaa < 2:222984/149‑1 (MQ=255) aTAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGAATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTaa < 4:1181305/149‑1 (MQ=255) gggCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAgg < 4:159067/149‑1 (MQ=255) gCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTg < 2:205969/97‑1 (MQ=255) gCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTg > 1:205969/1‑97 (MQ=255) ccAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAg > 1:1363102/1‑149 (MQ=255) ccAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAg < 1:270113/149‑1 (MQ=255) cAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGc < 3:284776/149‑1 (MQ=255) aaaGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCt > 2:606284/1‑149 (MQ=255) aaGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAgg > 1:782507/1‑143 (MQ=255) aGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTgg > 1:1381766/1‑149 (MQ=255) aaCGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTc < 1:1271434/149‑1 (MQ=255) aCGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAGCGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCg > 1:1066545/1‑149 (MQ=255) aCGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCg > 4:1142828/1‑149 (MQ=255) gCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTaa < 4:1051734/131‑1 (MQ=255) gCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTaa > 3:1051734/1‑131 (MQ=255) cAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCaa > 1:479114/1‑149 (MQ=255) cgcAGAATATTGACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAATCCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCaa > 1:1207054/1‑145 (MQ=255) cgcAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGa < 2:936337/149‑1 (MQ=255) cgcAAAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCaa < 2:1207054/145‑1 (MQ=255) gcAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAg < 2:1381766/149‑1 (MQ=255) gcAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAg > 4:1047127/1‑149 (MQ=255) aGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGgc < 4:367544/149‑1 (MQ=255) gAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGgcg > 2:66953/1‑149 (MQ=255) gAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGgc < 3:1141462/148‑1 (MQ=255) aaTATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGgcgc > 3:1055693/1‑149 (MQ=255) atatTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGCGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGcgcg > 3:30769/1‑149 (MQ=255) cGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGc > 2:120103/1‑147 (MQ=255) cTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATAtcat < 3:718067/149‑1 (MQ=255) gg‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGC‑‑GCGTTGTAAGACAGGGAGc > 3:433684/1‑107 (MQ=255) gggttttGCCATGCTGGCAAAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAg < 3:151807/106‑1 (MQ=255) g‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATAtcattcat > 1:147105/1‑149 (MQ=255) tttttGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATc < 3:1142828/149‑1 (MQ=255) tttttGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATc < 4:145491/149‑1 (MQ=255) tttttGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATc < 2:124416/149‑1 (MQ=255) ttttGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATcc < 4:785578/149‑1 (MQ=255) tttGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATccc < 1:517924/149‑1 (MQ=255) aTGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATCCCTGACCATgc < 4:451878/149‑1 (MQ=255) | CATAAAAATAAAGTTGATCAACGTCACCCGCACGCCGCCGAACTTATCGGAAATAGCACCACCAACCGACCGCGCGATGGCACCGATAAATGGGCCAAAGAACGCCAGGCGCAGAATATTCACATCCGGGAACTGGG‑TTTTTGCCAGCATGGC‑AAAACCCGCAGAAAAACCGATAAACGAACCGAAGGTGGCAAGGTAAAGCAGGCTCAGCAGCCAGAGATGCAGGCGTTGTAAGACAGGGAGCTGGTCGGCAATTGAGGCGCGTGAACTGGCGATATCATTCATCCCTGACCATGC > NC_000913/1543083‑1543379 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |