| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,390,024 | C→T | 8.7% | intergenic (+60/+24) | yfbP → / ← nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,390,024 | 0 | C | T | 8.7% | 393.1 / 18.1 | 126 | intergenic (+60/+24) | yfbP/nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Reads supporting (aligned to +/- strand): ref base C (57/58); new base T (9/2); total (66/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.72e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 133 total aligned reads displayed.
TATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGAT > NC_000913/2389878‑2390171 | tATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑tt > 3:1008760/1‑149 (MQ=255) aTGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑ttt < 4:870858/149‑1 (MQ=255) gATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTCAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCt < 4:101604/149‑1 (MQ=255) ttttAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGa > 3:1121417/1‑149 (MQ=255) atCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACaa > 3:63073/1‑149 (MQ=255) tCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGAc < 4:476148/142‑1 (MQ=255) tCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGAc > 3:476148/1‑142 (MQ=255) cGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAg < 4:159712/149‑1 (MQ=255) cGATGAATGGCAGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGT‑C‑TTTCTGACTTACAAAg < 4:1220256/149‑1 (MQ=255) gATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGt < 2:568052/149‑1 (MQ=255) tGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCCACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTaa < 2:1416423/149‑1 (MQ=255) tGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCAATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTaa < 2:801375/149‑1 (MQ=255) tGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGa < 2:104954/149‑1 (MQ=255) gggCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTAc > 2:465237/1‑149 (MQ=255) gCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACAt > 1:1181900/1‑149 (MQ=255) cAAAATTCAGGCAGGTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATc > 2:172806/1‑149 (MQ=255) aaaaTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACaa < 2:1204453/132‑1 (MQ=255) aaaaTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACaa > 1:1204453/1‑132 (MQ=255) aaaTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAg < 1:465237/149‑1 (MQ=255) aaTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGc < 4:380499/149‑1 (MQ=255) ttCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCgg > 2:1335276/1‑149 (MQ=255) aGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTaa < 2:853484/130‑1 (MQ=255) aGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTaa > 1:853484/1‑130 (MQ=255) ggCAGTTAGGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTCTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTCACCGATTACATCAGCGGCAtt < 2:260253/149‑1 (MQ=255) cAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGc < 4:1376431/149‑1 (MQ=255) gTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCa < 1:302975/149‑1 (MQ=255) gTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGc < 1:1429147/149‑1 (MQ=255) tttAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGca > 2:20647/1‑149 (MQ=255) gTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGc > 2:627770/1‑149 (MQ=255) gTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGc < 2:259849/149‑1 (MQ=255) gCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGc < 1:786453/149‑1 (MQ=255) gATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCgg < 1:1033263/149‑1 (MQ=255) tAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGtt < 3:461139/149‑1 (MQ=255) gTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgt < 1:1277872/149‑1 (MQ=255) tCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAAt > 3:1351222/1‑138 (MQ=255) tCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAAt < 4:1351222/138‑1 (MQ=255) tCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCa > 3:1060992/1‑140 (MQ=255) tCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGc > 1:914887/1‑142 (MQ=255) tCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgtg > 3:481236/1‑149 (MQ=255) cGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTgg < 2:555531/149‑1 (MQ=255) cGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTgg < 2:628419/149‑1 (MQ=255) acacAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCa < 4:1121417/149‑1 (MQ=255) acacAGCTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCa > 3:272953/1‑149 (MQ=255) gTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATacac > 1:1081042/1‑149 (MQ=255) gTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATacac > 2:639985/1‑149 (MQ=255) aCTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAg > 4:1174579/1‑149 (MQ=255) cTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGc > 2:702265/1‑149 (MQ=255) ttAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAAt > 4:1319991/1‑123 (MQ=255) aaCGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAcc > 1:1020505/1‑149 (MQ=255) gCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCa > 3:671068/1‑144 (MQ=255) gCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCa < 4:671068/144‑1 (MQ=255) tctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACa < 3:487427/85‑1 (MQ=255) tctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACa > 4:487427/1‑85 (MQ=255) ctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTAcc < 2:1125322/149‑1 (MQ=255) gTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACa < 2:1020505/149‑1 (MQ=255) ctatctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGt < 3:1172885/149‑1 (MQ=255) tctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCa < 4:459118/149‑1 (MQ=255) tactaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGTGGTtgt < 4:476562/114‑1 (MQ=255) actaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCagag > 1:125136/1‑149 (MQ=255) ctaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAgaga < 2:468145/149‑1 (MQ=255) taTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGAt < 1:489069/149‑1 (MQ=255) cccTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAg < 1:1335276/149‑1 (MQ=255) ccTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTCATCAGCGGTTGTGGCCATACACCCAGCACCAGTATCAACAGTGCAGAGATCAGc < 4:1008760/149‑1 (MQ=255) ccTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGc > 2:581131/1‑149 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGca > 3:10539/1‑149 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGca > 3:898492/1‑149 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACACTGCAGAGATCAGca > 3:1224578/1‑149 (MQ=255) ttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACa < 3:141320/57‑1 (MQ=255) ttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGcac > 1:1467016/1‑149 (MQ=255) ttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGcac > 2:359148/1‑149 (MQ=255) tttttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAAc > 3:31351/1‑149 (MQ=255) tttttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAAc > 1:732462/1‑149 (MQ=255) tttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGa > 3:461839/1‑149 (MQ=255) tttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGa > 4:1008437/1‑149 (MQ=255) aGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCaa > 3:765737/1‑122 (MQ=255) gAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCa > 2:1280633/1‑114 (MQ=255) gAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 2:34300/1‑149 (MQ=255) gAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 2:828689/1‑149 (MQ=255) gaaagCCGCCGA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 2:1023111/2‑149 (MQ=255) gaaagCCGCCGA‑CATGCTCGGCGG‑TTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 3:763002/2‑149 (MQ=255) gaaagCCGCCGA‑CATGCTCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgc > 2:34576/2‑149 (MQ=255) aaagccgccgA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCa < 2:1196107/123‑1 (MQ=38) aaagCCGCCGA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgc > 4:798811/1‑149 (MQ=255) aaaaCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgcc < 4:461839/149‑1 (MQ=255) aagccgccgA‑CATGCTCGGCGG‑T‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAg > 1:727981/4‑133 (MQ=255) aagccgccgA‑CATGCTCGGCGG‑T‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAg < 2:727981/130‑1 (MQ=255) agccgccgA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAACAGCTTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgccc > 3:1437786/3‑149 (MQ=255) aaCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAAc > 3:702937/1‑138 (MQ=255) aaCCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAAc < 4:702937/138‑1 (MQ=255) ccgccgA‑CATGCTCGGCGGTT‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgcccgc > 1:275520/1‑149 (MQ=255) cgAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGt < 2:732462/149‑1 (MQ=255) gAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTa > 2:1480563/1‑149 (MQ=255) gCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACt < 3:483404/149‑1 (MQ=255) acatgctCGGCGG‑TTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTa > 2:458407/7‑149 (MQ=255) ggcgg‑c‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGtt < 2:267404/149‑1 (MQ=255) ggcgg‑c‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGtt > 1:956079/1‑149 (MQ=255) ggcgg‑c‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGtt < 1:172806/149‑1 (MQ=255) gcgg‑c‑TTTCTGACTTACAAAGTAACCGATTACATAAGCGGCATTGTAAAACGCACAGTGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGttt < 4:780384/149‑1 (MQ=255) gcgg‑c‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGttt < 3:186676/149‑1 (MQ=255) gg‑c‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGa < 1:639985/149‑1 (MQ=255) | TATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑C‑TTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGAT > NC_000913/2389878‑2390171 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |