| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,525,907 | G→A | 6.0% | intergenic (+16/+23) | yfeN → / ← yfeR | putative outer membrane protein/transcriptional regulator of yefH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,525,907 | 0 | G | A | 6.0% | 541.0 / 16.8 | 167 | intergenic (+16/+23) | yfeN/yfeR | putative outer membrane protein/transcriptional regulator of yefH |
| Reads supporting (aligned to +/- strand): ref base G (82/75); new base A (5/5); total (87/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.97e-01 | |||||||||||
Only 100 of 171 total aligned reads displayed.
GGCGCAGTTGCACTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCACCAGCATCAA > NC_000913/2525760‑2526055 | ggCGCAGTTGCACTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTGTCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑Gc > 1:463222/1‑149 (MQ=255)ggCGCAGTTGCACTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑Gc < 3:511831/149‑1 (MQ=255) gcgcAGTTGCACTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCt > 2:523575/1‑149 (MQ=255) tGCACTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCa < 2:1442737/149‑1 (MQ=255) cACTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATTGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATGTAACTTCTGATCGATTACTGGCGGG‑GCTCCCGGCAGt < 2:55495/149‑1 (MQ=255) aCTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTa < 4:104511/149‑1 (MQ=255) cTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTAt < 3:1305681/149‑1 (MQ=255) cTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑AGCCCCGGCAGTaa < 3:572051/149‑2 (MQ=255) gtggtgGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGAGC‑CCCGGCAGTaatc < 2:762544/149‑4 (MQ=255) tggtggAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGaa < 1:1451919/149‑1 (MQ=255) ggAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCa > 1:832326/1‑149 (MQ=255) aTGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCActc < 1:1009385/149‑1 (MQ=255) aTGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCActc < 1:566562/149‑1 (MQ=255) tGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCActct > 4:156024/1‑149 (MQ=255) aaCATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCtata > 4:624738/1‑149 (MQ=255) aaCATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACATCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCtata > 3:1199929/1‑149 (MQ=255) aTCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCt < 4:951579/149‑1 (MQ=255) tCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCActct > 2:306535/1‑142 (MQ=255) cacacaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGa < 1:28350/149‑1 (MQ=255) cacacaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGa > 3:1237683/1‑149 (MQ=255) cacacaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTCCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGa > 1:1462049/1‑149 (MQ=255) acacaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGAt < 4:397260/149‑1 (MQ=255) cacaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCCGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATa < 2:770463/149‑1 (MQ=255) acaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATAc > 3:333239/1‑149 (MQ=255) ttACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAAc < 4:239713/149‑1 (MQ=255) ttACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAAc > 4:793495/1‑149 (MQ=255) tacGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGAt > 1:218621/1‑149 (MQ=255) cGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATcc < 1:301645/149‑1 (MQ=255) ggggATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑AGCCCCGGCAGTaa < 3:429486/117‑2 (MQ=255) ttCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTcc > 2:1217021/1‑149 (MQ=255) cAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTcc < 3:1076162/101‑1 (MQ=255) cAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTcc > 4:1076162/1‑101 (MQ=255) aGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGc > 3:1261267/1‑149 (MQ=255) gTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGcc > 3:349290/1‑149 (MQ=255) tATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGccc > 2:481872/1‑149 (MQ=255) tCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCATGATGCGATAATCTACTCCATCAATTTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAg > 3:1219212/1‑149 (MQ=255) gATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGcc > 2:1370273/1‑149 (MQ=255) atatGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCa > 2:252713/1‑149 (MQ=255) tGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTa < 3:233299/149‑1 (MQ=255) gCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAg > 2:649859/1‑149 (MQ=255) tGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGGATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCAt > 2:123752/1‑149 (MQ=255) aaaCTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGccc > 1:1272411/1‑131 (MQ=255) aaaCTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGccc < 2:1272411/131‑1 (MQ=255) aaaCTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGcc < 1:834256/149‑1 (MQ=255) aaaCTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAAGTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATGCCCTTCCCGCCCAGCCATTAGCGCATTGcc > 1:958389/1‑149 (MQ=255) aCTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCt < 2:147852/149‑1 (MQ=255) aCTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCt > 3:790617/1‑149 (MQ=255) aCTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCt > 4:1154996/1‑149 (MQ=255) cTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTg < 1:887059/149‑1 (MQ=255) gggCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGt < 1:1063339/149‑1 (MQ=255) gggCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGt > 1:673865/1‑149 (MQ=255) gggCGAAGATTTTTACCAGGATGCGATAATCTACTCCACCAAATTTAACTTCTGATTGATTACTGCCGGC‑GCTCTCTGCAGTATAAATTCACTCTATATCTGATACAATGGATCCCCTTCCCCCTCAGCTAGTAGCTCATTGCCCTgtt < 4:1228853/149‑3 (MQ=255) cGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGtctc < 1:584646/149‑1 (MQ=255) cGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGtctc < 4:542683/149‑1 (MQ=255) gAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCg > 1:372031/1‑149 (MQ=255) ccacctttttACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCg > 4:85678/6‑149 (MQ=255) aGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGTATTGCCCTGGTCTCGTa < 4:492559/149‑1 (MQ=255) gATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGAGCATTGCCCTGGTCTCGTAc < 3:483501/149‑1 (MQ=255) ggATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATa > 3:102584/1‑149 (MQ=255) gATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATaa > 4:1356782/1‑149 (MQ=255) gATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATaa > 1:978839/1‑149 (MQ=255) aTGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCCGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATaaa < 2:832326/149‑1 (MQ=255) tGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAg < 1:523575/149‑1 (MQ=255) tCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAgcg > 3:1404656/1‑149 (MQ=255) tACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAgcggc > 4:45400/1‑149 (MQ=255) cTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGa < 3:1015884/70‑1 (MQ=255) cTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGcggcgg > 4:961001/1‑149 (MQ=255) tCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGt > 4:728463/1‑149 (MQ=255) aTCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGa > 3:858475/1‑149 (MQ=255) tCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGaa > 4:262132/1‑149 (MQ=255) tCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGaa > 2:1060109/1‑149 (MQ=255) cAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGaaa < 3:294179/149‑1 (MQ=255) cAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGaaa < 2:1239588/149‑1 (MQ=255) cAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGaaa < 2:463222/149‑1 (MQ=255) tAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAAc < 4:676459/149‑1 (MQ=255) tAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAAc < 3:45400/149‑1 (MQ=255) aCTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACgg < 2:1350359/149‑1 (MQ=255) ttCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGtt < 4:689652/149‑1 (MQ=255) ttCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGtt > 3:689652/1‑149 (MQ=255) ttCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGtt < 4:1237683/149‑1 (MQ=255) tCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGttc < 1:1137256/149‑1 (MQ=255) tgattgatTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGaaa > 1:1237589/1‑136 (MQ=255) gattgattACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGttcttc < 2:1166722/149‑1 (MQ=255) ttgattACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATaaa > 1:807124/1‑114 (MQ=255) ttgattACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATaaa < 2:1266436/114‑1 (MQ=255) ttgattACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATaaa > 1:1266436/1‑114 (MQ=255) gattACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTgc < 4:102584/149‑1 (MQ=255) atACTGCCGGGAGC‑CCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGaaa > 1:1208262/2‑129 (MQ=255) atACTGCCGGG‑AGCCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGaaa < 2:1208262/128‑1 (MQ=255) tACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCa > 1:493006/1‑149 (MQ=255) tACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCa > 4:194651/1‑149 (MQ=255) tACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCa < 3:716697/149‑1 (MQ=255) cTGCCGGG‑AGCCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGaaa < 3:156930/126‑1 (MQ=255) tGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCACCa > 1:472348/1‑149 (MQ=255) tGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCACCa > 1:1204579/1‑149 (MQ=255) tGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCACCa < 4:1199929/149‑1 (MQ=255) tGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGGGAACGGTTCTTCCTGCGCACCa < 4:333239/149‑1 (MQ=255) ccGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCACCAGc > 1:1339629/1‑149 (MQ=255) ggg‑gCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCACCAGCAt > 1:1440480/1‑149 (MQ=255) gg‑gCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCACCAGCATc < 4:1267795/149‑1 (MQ=255) | GGCGCAGTTGCACTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGG‑GCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCACCAGCATCAA > NC_000913/2525760‑2526055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |