| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,180,497 | Δ1 bp | 5.3% | coding (77/1161 nt) | ygiC → | ATP‑Grasp family ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,180,497 | 0 | T | . | 5.3% | 936.7 / 39.6 | 263 | coding (77/1161 nt) | ygiC | ATP‑Grasp family ATPase |
| Reads supporting (aligned to +/- strand): ref base T (123/124); new base . (6/8); total (129/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.28e-01 | |||||||||||
Only 100 of 265 total aligned reads displayed.
CGCGACGGGTAAAAACTATGGCGCAGCCCAGCCAGGCCGCACCATGACCGTACCGAAGACGGCAATGGCACCAAAACCGGCGACCACCACTACCGTTACCCGTGGCGGTTTTGGTGAATCTGTTGCCAAACAAAGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACACCTGGAGTTTTGTGCGCCAGTCATGGCTGACGCACCAGCCATCGCTTTATTCGCGTCTTGATCTGGCGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAA > NC_000913/3180229‑3180767 | gacgGGTAAAAACTATGGCGCAGCCCAGCCAGGCCGCACCATGACCGTACCGAAGACGGCAATGGCACCAAAACCGGCGACCACCACTACCGTTACCCGTGGCGGTTTTGGTGAATCTGTTGCCAAACAAAGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCg < 2:498431/274‑1 (MQ=255) gacgGGTAAAAACAATGGGGCAGCCCAGCCAGGCCGAACCATGACCGTACCGAAGACGGCAATGGCACCAAAACCGGCGACCACCACTACCGTTACCCGTGGCGGTTTTGGTGAATCTGTTGCCAAACAAAGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCg < 2:560603/274‑1 (MQ=255) cagcccagccAGGCCGCACCATGACCGTACCGAAGACGGCAATGGCACCAAAACCGGCGACCACCACTACCGTTACCCGTGGCGGTTTTGGTGAATCTGTTGCCAAACAAAGCACTATGCAGAGTAGTGCAACCGGTACCTCTTCTCGTTCAATGTGTGGCTG‑ATACCGATGGACGGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGACGTAC‑TGGTGTG‑AAGCTGCTta > 1:167038/1‑279 (MQ=255) acATGACCGTACCGAAGACGGCAATTGCACCAAAACCGGCGACCACCACTACCGTTACACGTGGCGGGTTTGGTGAATCTGTTGCCAAACAAAGCACTATGAAGCGGAGTAAAACCGGTACCACTTCTCGGTCCATTGGTGGCTGCATACC‑CGGGAAAAACTCAGTATTACCGAGTCCCCGGAATGCCGTGGGAACGGCCACGAATCCGGCTTCAATTTTTCCCGCATGTACGGCGCGCCGTAC‑TGGGGTG‑ACGATCCTTACTAAAAGTTgcacc > 4:81123/2‑271 (MQ=255) aCCGTACCGAAGACGGCAATGGCACCAAAACCGGCGACCACCACTACCGTTACCCGTGGCGGTTTTGGTGAATCTGTTGCCAAACAAAGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACAACATGTACGGCGAACCGTAC‑CGGGGTG‑AAGATTGCTACTACAAGTTGACCCTCGcc > 4:350023/1‑275 (MQ=255) gAAGACGGAAATGGCACCAAAACCGGCGACCACCACGACCGTTACCCGTGGCGGTTTTGGTGAATCTGTTGCCAAACAAAGCACTATGCAGCGTAGTTCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGa < 2:656178/275‑1 (MQ=255) tCTGTTGCCAAACAAAGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGGGGTGGAAAAAGTg > 2:535403/1‑272 (MQ=255) tCTGTTGCCAAACAAAGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATGACCGAGCGCCCGGACTGGCGTGAGAAAGACCAAGAATACGGTTTCAATTTTAACACCATGTACGGCGAga > 2:401574/1‑161 (MQ=255) gTTGCCAAACAAAGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATg > 8:1563366/1‑149 (MQ=255) caaacaaaGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACgg < 7:1292230/149‑1 (MQ=255) aaacaaaGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCA‑GTACGGct > 5:1381024/1‑148 (MQ=255) acaaaGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGa > 8:1602442/1‑149 (MQ=255) acaaaGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAAGACGGTTTCAATTTTCAGACCATGTACGGCGa > 8:1193959/1‑149 (MQ=255) aaaGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGc > 7:1261366/1‑149 (MQ=255) aTGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCA‑GTACGGCTCGCCGTAcatgg < 6:64407/149‑5 (MQ=255) aTGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCA‑GTACGGCTCGCCGTAcatgg < 5:176140/149‑5 (MQ=255) tGCAGCGTAGTGCAACCGGTACCTCTTTTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAACTTGACTCTCGCCCAGGCTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGAAGCGCCTGAAAGTGGGGGAAAAAGGTATCCCCAGCGATGAGccgttgcaca > 4:567522/1‑266 (MQ=255) tGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCA‑GTACGGCTCGCCGTAcatggt < 7:1569256/149‑6 (MQ=255) tGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCA‑GTACGGCTCGCCGTAcatggt < 5:1082353/149‑6 (MQ=255) gCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGgtg > 8:1672890/1‑149 (MQ=255) aGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGtt > 2:227693/1‑168 (MQ=255) gCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCA‑GTACGGCTCGCCGTAcatggt < 7:1457017/145‑6 (MQ=255) gCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCA‑GTACGGCTCGCCGTAcatggt > 8:1457017/1‑140 (MQ=255) cGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑aa < 7:1522665/149‑1 (MQ=255) tAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGAcc < 4:227690/168‑1 (MQ=255) tGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGcc > 1:278951/1‑171 (MQ=255) gCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCt < 7:1122515/149‑1 (MQ=255) gCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCt < 6:1507550/149‑1 (MQ=255) ccGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTtact < 6:1111088/149‑1 (MQ=255) tACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTGCaa < 5:1480205/149‑1 (MQ=255) tACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATAAGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACaa < 6:1019786/149‑1 (MQ=255) aCCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAg < 6:1170717/149‑1 (MQ=255) ctctTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGtt > 8:868164/1‑149 (MQ=255) ctctTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATATTCACACCATGTACGGCGAGCCGTAC‑TGgtgt > 6:277698/1‑129 (MQ=255) tcttctCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCA‑GTACGGCTCGCCGTAcatgg < 5:165367/125‑5 (MQ=255) ttctCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑a > 6:71669/1‑128 (MQ=255) ttctCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑a < 5:71669/128‑1 (MQ=255) tCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCGCGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCGTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACCCCTGGAGtttt > 2:123321/1‑275 (MQ=255) aaTGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCa > 5:226941/1‑149 (MQ=255) aaTGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCa > 8:64402/1‑149 (MQ=255) aTGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGAc < 8:505962/139‑1 (MQ=255) aTGGGTGGCTG‑ATACCCATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TAGTGCG‑AAGATGCTTACTACAAGTTGACCCTCGCCTAg < 6:840007/149‑1 (MQ=255) tGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAg > 4:464409/1‑119 (MQ=255) gTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACACCTGGAGTTTTGTGCGcc < 2:350027/275‑1 (MQ=255) cTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGaaaa > 5:1535322/1‑149 (MQ=255) tG‑ATACCGATGGAAATAGTCAGTATTACCGCGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATCTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACGAGTTGACCCTCGCCCAGGTTGAAAAg > 8:1044824/1‑149 (MQ=255) tG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAg > 7:1007406/1‑149 (MQ=255) tACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGgt > 6:943219/1‑102 (MQ=255) tACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGgt < 5:943219/102‑1 (MQ=255) tACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTg < 7:1680763/149‑1 (MQ=255) cccaagggAAAGAGTGTGTATTACCGAGGGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACACCTGGAGTTTTGTGCGCCAGTCATGGc < 2:295251/269‑1 (MQ=255) aCCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGTGAGCCGTCC‑TGGTGTG‑ACGATGCTTACTACTAGTTGACCCTCGACCGGGTTTAAAAGCTGGAAGAATTCACCCACGAACTCCACAATCTGTGCCTGAATGGTGTGGAAAAAGTGATCGCCAGCGTTGAGCTGATGACCCAATTCCGCCTTCCAAAACCCACCTGGATCATTGTGCGCCTGTCATGGc > 4:295248/1‑275 (MQ=255) aCCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTgg < 7:1390207/149‑1 (MQ=255) aCCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTgg > 6:140318/1‑149 (MQ=255) tGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGgaagaa < 5:1002192/149‑1 (MQ=255) gAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTg > 8:225360/1‑133 (MQ=255) tCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCt < 5:276138/98‑1 (MQ=255) tCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCAccgcc > 7:59409/1‑149 (MQ=255) tATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAAc > 7:490806/1‑149 (MQ=255) tATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAAc > 7:381697/1‑149 (MQ=255) tATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATACCAAAACACACCTGGAGTTTTGTGCGCCAGTCATGGCTGACGCACCAGCCATCGCTTTa > 1:204661/1‑279 (MQ=255) aCCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCCCGCCAAGGTTGACAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACCCTCGGAGTTTTTTTCGCCAGTCATGGCTGCCGCCCCTGCCATTGCttca > 2:94803/1‑273 (MQ=255) ccGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCt > 8:1451952/1‑89 (MQ=255) aGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACACCTGGAGTTTTGGGCGCCAGTCATGGCTGACGCACCAGCCATCGCTTTATTCGCGTc > 1:172329/1‑279 (MQ=255) gcgcCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGa > 6:185036/1‑149 (MQ=255) cgcCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGa > 4:446183/1‑175 (MQ=255) ccGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGaaaa < 7:1358230/113‑1 (MQ=255) ccGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGaaaa > 8:1358230/1‑113 (MQ=255) ccGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGgaagaa > 8:81288/1‑123 (MQ=255) acggggtggaggaagaAAGACCAAAAATATGGTNAGAATTTATCCCCCATGTACGTCAGNCCGTAC‑TGG‑GTGTAAGATGACTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCANCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACACCTGGAGTTTTGTGCGCCAGTCATGGCTGACGCACCAGCCATCGCTTTATTCGCGTCTTGAt < 3:172329/266‑1 (MQ=255) cGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGt < 7:850922/124‑1 (MQ=255) cGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGc < 2:446187/175‑1 (MQ=255) ggCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGaaa < 6:226941/149‑1 (MQ=255) gTGAGAAAGCCCACGAATACGGTTTCAATTATCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAgtg < 8:551264/149‑1 (MQ=255) tGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAgtgg > 8:198584/1‑149 (MQ=255) gagaAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTGGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAgtggt < 5:1590579/149‑1 (MQ=255) agaAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAgtggtg > 6:531186/1‑149 (MQ=255) gaAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGtggtgg > 7:1659248/1‑149 (MQ=255) gaAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGtggtgg > 5:501338/1‑149 (MQ=255) ccACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAg > 6:678522/1‑149 (MQ=255) ccACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAg > 8:481491/1‑149 (MQ=255) cACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGt > 7:427014/1‑149 (MQ=255) cACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGt < 6:160296/149‑1 (MQ=255) cACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGt > 7:694193/1‑149 (MQ=255) cGAATACTGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGa < 7:198584/149‑1 (MQ=255) cGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGa < 7:281226/149‑1 (MQ=255) aaTACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATc > 7:979894/1‑149 (MQ=255) aaTACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATc > 6:448081/1‑149 (MQ=255) aaTACGGTTTCAATGTTCAAACCATGTACGGCGGGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACACCTGGAGTTTTGTGCGCCAGTCATGGCTGACGCACCAGCCATCGCTTTATTCGCGTCTTGATCTGGCGTGGGATGGCACTgg < 4:510642/274‑1 (MQ=255) tttCAATTCTAACCACAGGTACGGGGACGCGTAC‑TGTGTTG‑AAGAGACTTACTACAAGTGTACCCTCACCCAGGGTAAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAAGTGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATTACCAAATTCCGCATTCCAAAACACACCTGGAGTTTTGTGCGCCGGTCATGGCTGACGCAGCAGCCATCGCTTTATTCGCGTCTTGATCTGGCGTGGGATGGCACTGGTGAACCTa < 4:123319/275‑1 (MQ=255) aaTTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTGCAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGa < 7:78387/149‑1 (MQ=255) ttttCACACGCTGTACGGCGAGACGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGc < 7:339824/149‑1 (MQ=255) ttCACACCA‑GTACGGCTCGCCGTACATGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCtg > 6:1523452/1‑149 (MQ=39) ttCACACCA‑GTACGGCTCGCCGTACATGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCtg > 8:1203239/1‑149 (MQ=39) tCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCtga < 5:330182/149‑1 (MQ=255) cacaCCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCtgat < 8:381697/149‑1 (MQ=255) cacaCCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACACCTGGAGTTTTGTGCGCCAGTCATGGCTGACGCACCAGCCATCGCTTTATTCGCGTCTTGATCTGGCGTGGGATGGCACTGGTGAACCTAAACTTCTgg > 4:64126/1‑274 (MQ=255) acacCA‑GTACGGCTCGCCGTACATGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCtgatg > 8:1682771/1‑149 (MQ=255) acCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCAccgcc < 7:509310/87‑1 (MQ=255) cATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATg > 5:84338/1‑137 (MQ=255) | CGCGACGGGTAAAAACTATGGCGCAGCCCAGCCAGGCCGCACCATGACCGTACCGAAGACGGCAATGGCACCAAAACCGGCGACCACCACTACCGTTACCCGTGGCGGTTTTGGTGAATCTGTTGCCAAACAAAGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTG‑ATACCGATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTAC‑TGGTGTG‑AAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACACCTGGAGTTTTGTGCGCCAGTCATGGCTGACGCACCAGCCATCGCTTTATTCGCGTCTTGATCTGGCGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAA > NC_000913/3180229‑3180767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |