| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,286,313 | T→A | 5.8% | intergenic (+26/+77) | proL → / ← yejO | tRNA‑Pro/pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,286,313 | 0 | T | A | 5.8% | 759.7 / 23.5 | 223 | intergenic (+26/+77) | proL/yejO | tRNA‑Pro/pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base T (104/106); new base A (5/8); total (109/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 | |||||||||||
Only 100 of 230 total aligned reads displayed.
CGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCAC > NC_000913/2286050‑2286572 | cGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGttt > 2:679158/1‑275 (MQ=255)cGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCAAAGAAAAAACCAACCCTTACGGTTGGttt > 2:609495/1‑275 (MQ=255) gaaaaggtgaaagaTGAAAAACCACATTTAAGTTTTTTATTGCAAGTGCTGACAGACGGGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTtat < 4:129272/269‑1 (MQ=255) gTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATa > 2:483739/1‑259 (MQ=255) ttttttcAAGTTCTTCCAGAAGAGAATCGTTTTTTCTCGAACTGTTTCATTATAAATCAGTTAGCGAAAGATCTTCCTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGCGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTAGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACAt < 4:679153/269‑1 (MQ=255) aGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCCACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTAtttt < 2:190534/275‑1 (MQ=255) cGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTACCGTGCCGCCCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATATGCACTTAATTCGATCAACA‑ACCCTGTACCCATCACATCCTGTTTAtttttt > 4:190125/1‑272 (MQ=255) aGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑acac > 2:373665/1‑248 (MQ=255) attaattaTAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCa > 4:264354/1‑202 (MQ=255) attaTAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCaatta < 2:264357/202‑1 (MQ=255) taAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGATCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACAGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCGGACCCAACCCGCCTGAg > 4:430980/1‑275 (MQ=255) ttACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCtt > 7:1248080/1‑149 (MQ=255) ttACTTGCAATCGGTGTGGAAAACGGTAGCATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCAACCAAAAATCCCAAGAAAAAACCAACCCtt > 7:1373093/1‑149 (MQ=255) attgcaaggtgtgtGGAAAAGGATAGTAGTAGCAGCCACTAGTCGGAACGGCGCGAAGCCTGGTAGGGCACCG‑GATGTGGGTATGGGGGGTAGTAGGTTCATACCCTTTCGTGCCGACTAAAAATCCCAAGAAAAAACCAACCCTTACCGTTGGTTTTTTTATATCTGCAATTAATTCGGTAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCATAACGTCCAGACAACTCCCGCCTGAGTATTCCACGGCGATTCTACCCCTg < 4:325436/265‑1 (MQ=255) aaTCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCGTAAGggttgg < 5:226272/149‑1 (MQ=255) aaTCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTAc > 5:1393361/1‑143 (MQ=255) aTCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCTTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCGTAAGggttggt < 5:1149150/149‑1 (MQ=255) aTCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACggttggt < 8:66970/149‑1 (MQ=255) cGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGttt < 5:493986/149‑1 (MQ=255) tgtgGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGtttttt < 8:267128/149‑1 (MQ=255) aaCGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCt > 7:1021731/1‑149 (MQ=255) ggTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACggt < 1:3741/130‑1 (MQ=255) ggTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCa > 6:1392790/1‑149 (MQ=255) gtagtaTTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGtttttt < 6:815260/138‑1 (MQ=255) tagtaTTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCaat < 6:1182694/149‑1 (MQ=255) tagtaTTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTAtttt < 1:232545/193‑1 (MQ=255) tagtaTTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCtgactgac > 2:226113/1‑275 (MQ=255) ttAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCaattaatt > 6:489690/1‑149 (MQ=255) tAGCAGCCACGAGTCGGCCCGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAACAATCCCAAGAAAAAACCAACCCTTACGGTTAGTTTTTTTATATCTGCAATTAATTc < 7:605762/149‑1 (MQ=255) cagcCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGAt < 5:1519296/149‑1 (MQ=255) atccACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAACTCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCATACCACACCCGCCTGAGTATTCCACGGCGATTCTCACCCTGCGCCATTGCCATAGCTGACTGACACATGAcctc > 2:144200/3‑273 (MQ=255) ccACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGttttt < 6:1130397/124‑1 (MQ=255) ccACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATaaa > 5:852380/1‑149 (MQ=255) ccACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATaaa > 7:22690/1‑149 (MQ=255) cACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTNTATATCTGCAATTAATTCGATAANCAGANCCTG‑ACACATCAAAGCCTGTTTATTTTCTGTTATCAGCACGTCCAGACCacac > 4:703317/1‑206 (MQ=255) aCGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTAc > 6:481711/1‑111 (MQ=255) aCGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTAc < 5:481711/111‑1 (MQ=255) aCGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAAc < 5:1652866/148‑1 (MQ=255) gAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGa < 7:841294/149‑1 (MQ=255) aGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTc < 2:703322/192‑1 (MQ=255) cGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCg > 6:777189/1‑136 (MQ=255) gcgcAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATca > 5:315661/1‑149 (MQ=255) cgcAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt < 2:430984/275‑1 (MQ=255) aGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTa > 6:1357591/1‑91 (MQ=255) aGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTa < 5:1357591/91‑1 (MQ=255) tGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGt < 6:256570/149‑1 (MQ=255) ggTAGCGCACCATCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGtt < 8:710868/149‑1 (MQ=255) gcACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTAtttt < 5:806840/149‑1 (MQ=255) cACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTc < 7:482656/149‑1 (MQ=255) aCCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCt > 6:942831/1‑149 (MQ=255) aCCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCt < 8:1248080/149‑1 (MQ=255) aCCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTGTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTAtt > 6:1664822/1‑145 (MQ=255) cGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTAtt > 4:480630/1‑143 (MQ=255) gTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGc < 1:102882/174‑1 (MQ=255) gTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGc > 3:102882/1‑174 (MQ=255) tCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTc < 8:1629015/144‑1 (MQ=255) tCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTc > 7:1629015/1‑144 (MQ=255) tCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTa > 7:151992/1‑149 (MQ=255) cATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTAt < 7:2912/149‑1 (MQ=255) gggTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGa > 5:778580/1‑149 (MQ=255) atgtCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAAc < 8:1522588/148‑1 (MQ=255) gtCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGt > 6:1627517/1‑149 (MQ=255) tCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCAATg > 2:58170/1‑275 (MQ=255) cGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTcc < 5:1196327/149‑1 (MQ=255) gggggTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCa > 6:1410724/1‑149 (MQ=255) gTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ac < 2:315343/106‑1 (MQ=255) gAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCacac < 5:282390/149‑1 (MQ=255) aGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGc > 7:1616186/1‑111 (MQ=255) aGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGc < 8:1616186/111‑1 (MQ=255) aaaTCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTtata > 5:957415/1‑64 (MQ=255) aaaTCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTg > 6:1465705/1‑149 (MQ=255) aaTCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGa < 7:898245/149‑1 (MQ=255) aaTCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGa < 8:1085271/149‑1 (MQ=255) aaTCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGa < 5:1616870/149‑1 (MQ=255) ccTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTa > 6:1231915/1‑149 (MQ=255) tctcGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTAtt > 7:1195332/1‑149 (MQ=255) gACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGa > 5:1249309/1‑149 (MQ=255) aaaaaTCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCt > 6:595105/1‑149 (MQ=255) aaaaTCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGAtt < 8:416511/146‑1 (MQ=255) aaTCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCaattaa > 6:378244/1‑53 (MQ=255) ccAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTg > 5:1382122/1‑149 (MQ=255) cAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTc > 8:1314395/1‑90 (MQ=255) cAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTc < 7:1314395/90‑1 (MQ=255) cAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAAc > 5:531844/1‑102 (MQ=255) cAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCa < 8:455848/131‑1 (MQ=255) cAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTgc > 6:1591062/1‑149 (MQ=255) cAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCACACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTgc > 5:947103/1‑149 (MQ=255) aaaaaCCAACCCTTACGGTTGGTTTTTTTATATCTGCATTTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCAt < 6:1066139/149‑1 (MQ=255) aaaaCCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCAtt < 5:1026508/149‑1 (MQ=255) aaaaCCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCAtt < 6:876442/149‑1 (MQ=255) aaccaaccCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATc > 8:33500/1‑65 (MQ=255) ccaaccCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTC‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCa > 5:1123550/1‑149 (MQ=255) caaccCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCAt < 8:20212/149‑1 (MQ=255) caaccCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCAt > 8:853384/1‑149 (MQ=255) cccTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACCGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGc < 8:1021731/149‑1 (MQ=255) cccTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACg > 2:560747/1‑211 (MQ=255) cTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGctg > 7:450368/1‑149 (MQ=255) cTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGctg > 5:657922/1‑149 (MQ=255) ttACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGctga > 7:1671611/1‑149 (MQ=255) tACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCAc < 4:560743/211‑1 (MQ=255) | CGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATG‑GGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTG‑ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCAC > NC_000913/2286050‑2286572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |