| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,462,679 | A→T | 5.7% | intergenic (+33/‑333) | fadL → / → yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,462,679 | 0 | A | T | 5.7% | 934.6 / 31.8 | 267 | intergenic (+33/‑333) | fadL/yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base A (120/131); new base T (7/8); total (127/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.41e-01 | |||||||||||
Only 100 of 277 total aligned reads displayed.
CTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGA > NC_000913/2462418‑2462952 | gCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGAAGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGaaa > 2:217273/1‑273 (MQ=255) ttCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCAt > 2:557093/1‑275 (MQ=255) ttCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGCCTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCCCGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGCAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCTTTCTTATAACGCGTTCGCCTTGAT‑AACGTCACCTGCCTA‑GCCGGTGACTTTAACTCCCCCACTTCACCGACAGTAGTT‑TCCTAATAGCTTACCTCCTGac > 1:200914/1‑278 (MQ=255) tttCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTCACTTTAACTACGCGTTCTGATAACGCGTTCCCCTTGAT‑AAAGTAACCTGCCTA‑GCAGGTCACTTTAAATCCCACACTTCACCGAAAGTAGTGCACCTCTGTGCTCACC‑CTTGAGTTTTGCAAACAg > 4:626930/1‑275 (MQ=255) ttACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCa < 2:355052/274‑1 (MQ=255) cTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTACAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCcaca > 4:48891/1‑275 (MQ=255) aGTCGACGTTGGTGTTTCTTATATGCACGGTAAGGGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACa < 2:626934/275‑1 (MQ=255) aCGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATa < 7:1580623/149‑1 (MQ=255) aCGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATa < 5:1351409/149‑1 (MQ=255) aCGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAagtagt > 3:162745/1‑187 (MQ=255) cGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑g < 6:221656/149‑1 (MQ=255) ttGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTCCTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCa > 8:606386/1‑149 (MQ=255) gtgtTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGt < 5:1248052/149‑1 (MQ=255) tgtTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTg > 5:900601/1‑149 (MQ=255) gtTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGa < 8:1430337/149‑1 (MQ=255) tttCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGTT‑AAAGTCACCTGCTAT‑GCAGGTGAc < 7:1473937/149‑1 (MQ=255) tttCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCTAT‑GCAGGTGAc < 6:725720/149‑1 (MQ=255) tCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACtt < 7:403530/149‑1 (MQ=255) ttttatGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTa > 7:751349/4‑149 (MQ=255) ttATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCa > 7:979349/1‑139 (MQ=255) gCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTccc > 8:652144/1‑149 (MQ=255) gCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTccc < 6:749376/149‑1 (MQ=255) aCGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTccccc > 7:280822/1‑149 (MQ=255) aCGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTc < 2:261821/172‑1 (MQ=255) cAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGt < 4:351554/233‑1 (MQ=255) gagCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCAc < 5:1711155/149‑1 (MQ=255) gAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAag > 7:231512/1‑149 (MQ=255) aaaTTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAagta < 5:502047/149‑1 (MQ=255) ttAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAgtg < 7:1410045/149‑1 (MQ=255) tAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAgtg‑t < 6:440643/149‑1 (MQ=255) ccATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACttt < 8:24907/111‑1 (MQ=255) ccATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCt > 7:540112/1‑149 (MQ=255) ccATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCt > 5:374037/1‑149 (MQ=255) cATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCtt < 5:266481/149‑1 (MQ=255) tACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTAc < 8:812501/149‑1 (MQ=255) ccAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGaaa < 8:1149276/127‑1 (MQ=255) cAGTTCGAGTCTGAAGGTAAAGCCTTGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCTTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTAcctc < 8:182676/149‑1 (MQ=255) aGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCTAT‑GCAGGTGACtt < 8:287916/103‑1 (MQ=255) gTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACNGAAAGTANTG‑TNCTCATTNCTTACCTCCTGAGTTTTGCAAAc > 3:39859/1‑162 (MQ=255) gTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTAcctcct < 5:1522146/149‑1 (MQ=255) gTTCGAGTCTGAAGGTAAAGCCTGGCTGTGCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTAcctcct > 7:1075681/1‑149 (MQ=255) gTTCGAGTCGTAAGGGAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGGTCGCCTGGATAAAAGTCACCTTCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCGTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAGCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCGCAAAGAGTTTACtttt < 4:305915/275‑1 (MQ=255) tCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGACAGGCATATTTTCAGGCg > 1:289103/1‑240 (MQ=255) gAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCt < 6:281163/130‑1 (MQ=255) gTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACa > 1:106792/1‑206 (MQ=255) tCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCTAT‑GCAGGTGACttt > 8:1527869/1‑96 (MQ=39) tCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCTAT‑GCAGGTGACttt < 7:1527869/96‑1 (MQ=39) cTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTg < 6:885851/149‑1 (MQ=255) aGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAagta < 5:1126409/115‑1 (MQ=255) aGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCaaa > 6:560817/1‑149 (MQ=255) tAAAGCCTGGCGGTTCGGTACTAACTTTAAGAGAGGGGTCTGATAACGCGTTCGCCGTGTT‑AAAGTCACCTGCATA‑GCAGGGGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATa < 4:58233/275‑1 (MQ=255) aaaGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATa > 2:706020/1‑75 (MQ=255) cTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGtt < 6:801626/149‑1 (MQ=255) cTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGtt < 7:1292686/149‑1 (MQ=255) gCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAAc < 6:1248994/82‑1 (MQ=255) gCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGc > 8:1164236/1‑149 (MQ=255) ttCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTcccc > 4:16324/1‑83 (MQ=255) ttCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGc < 4:734714/137‑1 (MQ=255) gTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACt < 2:16324/83‑1 (MQ=255) tAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCttt < 8:475916/149‑1 (MQ=255) tAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCttt > 8:1372569/1‑149 (MQ=255) aaCTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTc < 7:1387802/149‑1 (MQ=255) aaCTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑CCCCCCCCCTGGCTATtgtg < 2:326476/275‑1 (MQ=255) aCTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCAt > 4:206277/1‑99 (MQ=255) aCTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGc > 1:151640/1‑127 (MQ=255) cTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTAc < 7:1674098/105‑1 (MQ=255) ttttACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTCAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGATTGCCCTTTCaaa > 8:1437666/1‑149 (MQ=255) tttAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGt < 8:592128/57‑1 (MQ=255) tttAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGt > 7:592128/1‑57 (MQ=255) tttAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACttt < 5:1622548/63‑1 (MQ=255) tttAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTccccc > 7:63418/1‑72 (MQ=255) cgaaCGCGTTATCAGAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCaa > 8:1240047/4‑149 (MQ=255) cTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAAt < 8:1587660/149‑1 (MQ=255) aCGCGTTATCAGAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATaa > 5:141819/1‑149 (MQ=255) tcgTTCGGATAAAGCGTTCGCCTGGAT‑AAAGGCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACGTCACCGAAAGTAGTT‑TCCTCATTGACTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCaaa < 1:72933/278‑1 (MQ=255) gcgTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGc < 6:1521425/149‑1 (MQ=255) cgTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCg < 7:1164236/149‑1 (MQ=255) tCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTa > 6:1157187/1‑149 (MQ=255) tGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATc > 7:32088/1‑149 (MQ=255) tAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCcac > 6:61165/1‑149 (MQ=255) gCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCt > 5:77441/1‑149 (MQ=255) ggAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACCAACCTGAAg < 5:1475811/149‑1 (MQ=255) gAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAgg > 6:943241/1‑149 (MQ=255) t‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCttt < 5:841569/110‑1 (MQ=255) aaGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGaaa < 5:61165/149‑1 (MQ=255) aGTCACCTGCTAT‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAg > 7:1150116/1‑149 (MQ=255) aGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAagta > 3:13933/1‑49 (MQ=255) aGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCaaa < 7:508970/111‑1 (MQ=255) aGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCGAAGAGTTTACTTTTCTGCa > 2:33168/1‑201 (MQ=255) gTCACCTGCTAT‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGtt > 7:862285/1‑75 (MQ=38) gTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAgg > 6:1621719/1‑149 (MQ=255) gTCACCTGC‑TATGCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGtt < 8:862285/75‑1 (MQ=38) tCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGc < 8:32088/149‑1 (MQ=255) aCCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGa < 7:851728/128‑1 (MQ=255) aCCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCat > 8:1005433/1‑149 (MQ=255) aCCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCGAAGAGTTTACTTTTCTGCATTTc < 4:33168/201‑1 (MQ=255) tA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCa < 6:1404253/149‑1 (MQ=255) tA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGACATATTTTCa > 5:446039/1‑149 (MQ=255) a‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCgg > 6:1097891/1‑110 (MQ=255) a‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTACAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCCCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 2:48891/275‑1 (MQ=255) | CTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGATAACGCGTTCGCCTGGAT‑AAAGTCACCTGCATA‑GCAGGTGACTTTAACTCCCCCACTTCACCGAAAGTAGTG‑TCCTCATTGCTTACCTCCTGAGTTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑CCCCCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGA > NC_000913/2462418‑2462952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |