| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,388,283 | C→T | 5.2% | intergenic (+22/+22) | tyrR → / ← tpx | aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase/lipid hydroperoxide peroxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,388,283 | 0 | C | T | 5.2% | 754.4 / 20.7 | 233 | intergenic (+22/+22) | tyrR/tpx | aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase/lipid hydroperoxide peroxidase |
| Reads supporting (aligned to +/- strand): ref base C (117/102); new base T (3/9); total (121/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.48e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.59e-01 | |||||||||||
Only 100 of 238 total aligned reads displayed.
TGGACGGTTATGAGCTGCGTCCACAGGATATTTTGTTGCCGGATTATGACGCCGCAACGGTAGCCGTGGGCGAAGATGCGATGGAAGGTTCGCTGGACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGCCAGACCTTTCAGTGGGCCATCAGCAATTGCCACACCGTAAGCTTGCAGAAATTCAGCGTTACGGAAAGTGGAGAGGGTGATAACGTTGTTCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCA > NC_000913/1388008‑1388560 | aCGGTTATGAGCTGCGTCCACAGGATATTTTGTTGCCGGATTATGACGCCGCAACGGTAGCCGTGGGCGAAGATGCGATGGAAGGTTCGCTGGACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCaa < 2:292982/275‑1 (MQ=255) tgCCGGATTATGACGCCGCAACGGTAGCCGTGGGCGAAGATGCGATGGAAGGTTCGCTGGACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGGGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACAATCCGGCATATTAAATTTACCTTTCAGtt > 4:538407/1‑274 (MQ=255) ttATGACGCCGCAACGGTAGCCGTGGGCGAAGATGCGATGGAAGGTTCGCTGGACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCag < 2:502165/275‑1 (MQ=255) cgccgcAACGGTAGCCGTGGGCGAAGATGCGATGGAAGGTTCGCTGGACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGCAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTc > 1:230498/1‑278 (MQ=255) cgcAACGGTAGCCGTGGGCGAAGATGCGATGGAAGGTTCGCTGGACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTTCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTaa > 1:209698/1‑279 (MQ=255) cgcAACGGTAGCCGTGGGCGAAGATGCGATGGAAGGTTCGCTGGACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCCGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTc > 2:675458/1‑275 (MQ=255) aGATGCGATGGAAGGTTCGCTGGACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATAtt < 2:624779/221‑1 (MQ=255) ggaggtttgccTGGAAGAAATCGCCGGCGGTTTTAACCGTGAGGTATTAACCCAGCTTTATCGCAATTATCCCAGCAGACNAAAACTGGCAAAACGTTGCGGCGTTTCACATACCGGGTTTGCCAATAAGTTGGGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAAGTATGCTTTCAGTACAGCCAGAGCTGCGTCGTAATCCGGCTCGGTGGGGATTTCATCCACCAg < 3:230498/268‑1 (MQ=255) tCGCTGGAAGCAATCACAAGCCGGTTTTAACGCTCGGTATTAACCCAGATTTATCGAAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAgctgg < 4:130874/275‑1 (MQ=255) ggACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGaa > 2:606082/1‑275 (MQ=255) ttttTAACGCTCGTTATTACCCCAGCTTTAGCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGACAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCa < 1:27733/279‑1 (MQ=255) ttGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCACAGCACGCGCAAAATGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCAGAGGAAGAAGAAGAACGAAGAGTAAGCGCGAATATGCGTGATGGTGAAACCACCA‑CAGGCAGATCAAATTATGTTTTCAGTACAGCCAAGACTGCCTCGTACACGCGATCTATGGTGATTGTATCCACAAGCTGACTGGAAATCAACTTGTCATTTTCGt > 4:143795/1‑275 (MQ=255) aTTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGc < 7:288250/149‑1 (MQ=255) aaCCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCaa > 5:820969/1‑148 (MQ=255) ccAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGACAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CAcc > 6:1271755/1‑149 (MQ=255) aacgttcacGCAAGTATCCCGCCCCGCGCAAACTGGAAAAACGACTCGGCGTTCCACATACCGCGATTTCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGATGATTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCAcg < 4:551592/265‑1 (MQ=255) gCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATc < 6:832076/149‑1 (MQ=255) gCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAAtt < 3:115617/163‑1 (MQ=255) gCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAAtt > 1:115617/1‑163 (MQ=255) gCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCttt > 4:604237/1‑170 (MQ=255) gCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCAcgcg > 2:551596/1‑274 (MQ=255) gCTTTATCGCAATTACCCCAGCACGCGCAACCTGGCAGAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCt < 1:148650/202‑1 (MQ=255) tttATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGTTG‑CACCATCAg < 5:1175756/149‑1 (MQ=255) tttATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGTTG‑CACCATCAg < 6:716950/149‑1 (MQ=255) tttATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGTTG‑CACCATCAg < 6:1007696/149‑1 (MQ=255) tttATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATACGCCTGATGGTGTTG‑CACCATCAg < 8:1218291/149‑1 (MQ=255) ttaaggaaTTATACCAGCACGGGCAACATGGGAAAACGTGCGGGATTTTAAAATACCGCGATTGCAAATAAGTTGCGGGAAGATGGTCTGGGTACGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CAGCATCAGGCATATTAAATTATGCTTTAAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCTGTTGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGAGCTGcc < 4:634773/269‑1 (MQ=255) tATCGCAATTATCCCAGCACGCGCAAACTGTCAAAACGTCTCGGCAGTTCACATACCGCGATTGCCAATAAGTGGTGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATTAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACGACGGCACGCACTGcc < 4:84342/275‑1 (MQ=255) cGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGTTG‑CACCATCAg < 5:1378664/144‑1 (MQ=255) cGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCata > 5:1041119/1‑149 (MQ=255) gCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCatat > 5:34697/1‑149 (MQ=255) aaTTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTa > 8:50227/1‑149 (MQ=255) ttATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTaaa < 8:272492/149‑1 (MQ=255) ttccAGCACGCGCAAACTGCCAAAACGTCTCGGCGGTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGGCTGAGGCAGACGAAGAACGAATAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTa > 8:1005864/3‑149 (MQ=255) tCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTa < 8:1503691/149‑1 (MQ=255) ccAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATg > 8:12811/1‑149 (MQ=255) gCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCtt > 6:524434/1‑149 (MQ=255) gCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGCCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCttt > 2:741454/1‑150 (MQ=255) gcAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGc > 4:320623/1‑114 (MQ=255) cAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGCCAGACCTTTCAGTGGGCCATCAGc < 2:38832/275‑1 (MQ=255) aaaCTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGATGCGGGAATATGGGCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACa > 8:313154/1‑149 (MQ=255) accTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGCCAGACCTTTCAGTGGGCCATCAGCaa < 2:143797/273‑1 (MQ=255) aCTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGTTG‑CACCATCAg > 6:666391/1‑121 (MQ=255) aCTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGTTG‑CACCATCAg < 5:666391/121‑1 (MQ=255) tGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCa < 5:577253/149‑1 (MQ=255) tctcGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTc > 5:142534/1‑149 (MQ=255) ctcGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCg < 5:1047606/149‑1 (MQ=255) tcGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGt > 8:647999/1‑149 (MQ=255) ggCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTaa < 8:1158177/149‑1 (MQ=255) gTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATcc < 6:1027466/149‑1 (MQ=255) tttCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATcc > 5:501599/1‑148 (MQ=255) tttCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCg > 6:479201/1‑149 (MQ=255) tttCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTCCGTAATCCg > 7:1376885/1‑149 (MQ=255) tACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCggt < 5:685397/149‑1 (MQ=255) ccGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTAt > 5:1559645/1‑106 (MQ=255) cgATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAg < 3:196671/89‑1 (MQ=255) gCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCa < 5:205939/149‑1 (MQ=255) gCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCa < 6:256173/149‑1 (MQ=255) gCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCa < 7:691/149‑1 (MQ=255) cAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATc > 8:79253/1‑149 (MQ=255) cAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATc > 7:139965/1‑149 (MQ=255) cAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATc < 5:482669/149‑1 (MQ=255) aaTAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATcc > 8:1178215/1‑149 (MQ=255) aGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATAtt < 4:362419/84‑1 (MQ=255) gTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTc > 5:588658/1‑140 (MQ=255) gTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGCCAGACCTTTCAGTGGGCCATCAGCAATTGCCACACCGTAAGCTTGCAGAAATTCAGCGTTACGGAAAGTGga < 2:47843/275‑1 (MQ=255) gCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGCGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGCCAGACCTTTCAGTGGGCCATCAGCATTTGCCACACCGTAAGCTTTCAGAATTTTAGCGTTACGGAAAGTGaag > 2:351459/1‑273 (MQ=255) gggAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCgg < 8:704995/125‑1 (MQ=255) gggAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAgctggc > 7:706143/1‑149 (MQ=255) gataatGGTCTGAGTCAGAAGAAGAACGAAGAGGAAGCGCGAATATGCCGGTTGGTGCAT‑CGCCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTCATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGCCACGCGCTGCCAGACCTTTCAGTGGGCCATCAGCAATTGCCACACCGTAAGCTTGCAGAAATTCAGCGTTACGGAAAGTGga < 4:643868/264‑1 (MQ=255) tGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACAt > 8:1431374/1‑149 (MQ=255) tGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACAt > 5:1120339/1‑149 (MQ=255) gAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTTGTGATTTCATCCCCCAGCTGGCTGGAAATCACATTGTCATTTTCGTCAAAAACCACAACAGCACGCGCTGCCCGCCCTTTCAGTGGGCCATCAGCACTTGCCACACCTTAAGCTTACAGACATTCAGCGTTACGGAAAGTGGAGAGGGTGATAACGTTGTTAAg > 1:186133/1‑278 (MQ=255) gTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACgg > 4:199208/1‑173 (MQ=255) tCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTc > 7:1608607/1‑149 (MQ=255) tCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTc < 8:139965/149‑1 (MQ=255) agaggaagaACGAAGAGGAAGCGCGAAGAGGCCTGAGGGTACAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCATGCGCTGCCAGACCTTTCAGTGGGCCATCAGCAATTGCCACACCGTATGCTTGCAGAAATTCAGCGTTAc < 2:110905/242‑1 (MQ=255) aagaaCGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCg > 6:696198/1‑149 (MQ=255) aaCGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCa > 6:1548427/1‑149 (MQ=255) aCGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTGATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCaa < 7:1461958/149‑1 (MQ=255) gAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATa > 5:1146463/1‑149 (MQ=255) gAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATa > 5:1471498/1‑149 (MQ=255) aaGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGTTTTCAGTACAGCCAGAGCTGCTTCGTACTCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATaa < 6:1663382/149‑1 (MQ=255) agTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGCCAGACCTTTCAGTGGGCCATCAGCAATTGCCACACCGTAAGCTTGCAGAAATTCAGCGTTACGGAAAGTGGAGAGGGTGATAACGTTGTTCAGACCTTCTGCGCCGCAgc > 2:184547/1‑274 (MQ=255) gTAAGCGCGAATATGCCTGATGGAGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGCCAGACCTTTCAGTGGGCCATCAGCAATTGCCACACCGTAAGCTTGCAGAAATTCAGCGTTACGGaa < 2:421622/230‑1 (MQ=255) tAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACcaca > 6:1589405/1‑149 (MQ=255) aaGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACaa < 7:209376/149‑1 (MQ=255) atatGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCAcgc < 6:142534/149‑1 (MQ=255) atGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACgcgc < 6:978277/149‑1 (MQ=255) tGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCt < 7:365445/149‑1 (MQ=255) gCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTg < 6:1135865/149‑1 (MQ=255) ccTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATaa > 6:577259/1‑130 (MQ=255) cTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGcc > 5:266279/1‑149 (MQ=255) tGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGCCa > 7:1540617/1‑149 (MQ=255) aTGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAgctggc > 6:1060029/1‑96 (MQ=255) aTGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAgctggc < 5:1060029/96‑1 (MQ=255) tGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCTTTTTCGTCAATAACCACAACGGCACGCGCTGCCAGAc > 8:614485/1‑149 (MQ=255) tGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGCCAGACCtt > 5:721881/1‑149 (MQ=255) gCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGCCAGACCttt < 7:499099/149‑1 (MQ=255) gCAA‑CACCATCAGGCATATTAAATTAGGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAAGAACCACAACGGCACGCGCTGCCAGACCTTTCAGTGGGCCATCAGCAATTGCCACACCGTAAGCTTGCAGAAATTCAGCGTTACGGAAAGTGGAGAGGGTGATAACGTTGTTCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCa < 1:72543/279‑1 (MQ=255) | TGGACGGTTATGAGCTGCGTCCACAGGATATTTTGTTGCCGGATTATGACGCCGCAACGGTAGCCGTGGGCGAAGATGCGATGGAAGGTTCGCTGGACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAAGCGCGAATATGCCTGATGGTGCAA‑CACCATCAGGCATATTAAATTATGCTTTCAGTACAGCCAGAGCTGCTTCGTAATCCGGCTCGGTGGTGATTTCATCCACCAGCTGGCTGAAAATCACATTGTCATTTTCGTCAATAACCACAACGGCACGCGCTGCCAGACCTTTCAGTGGGCCATCAGCAATTGCCACACCGTAAGCTTGCAGAAATTCAGCGTTACGGAAAGTGGAGAGGGTGATAACGTTGTTCAGACCTTCTGCGCCGCAGAAACGAGACTGGGCGAACGGCAGATCGGCA > NC_000913/1388008‑1388560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |