| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,714,163:1 | +T | 7.4% | coding (2232/2334 nt) | bisC ← | biotin sulfoxide reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,714,163 | 1 | . | T | 7.4% | 714.9 / 55.0 | 176 | coding (2232/2334 nt) | bisC | biotin sulfoxide reductase |
| Reads supporting (aligned to +/- strand): ref base . (78/85); new base T (6/7); total (84/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
Only 100 of 177 total aligned reads displayed.
TCGATTGCGCATGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGACCGCTCCGGCAA > NC_000913/3714019‑3714308 | cGATTGCGCATGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGa < 4:1560926/149‑1 (MQ=255) ttGCGCATGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCt < 3:467499/149‑1 (MQ=255) cgcATGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGCTCGCG‑GCTggg < 3:1393742/149‑1 (MQ=255) cgcATGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGCTCGCG‑GCTggg < 1:475182/149‑1 (MQ=255) gcATGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTgggg < 1:123454/149‑1 (MQ=255) cATGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGga < 1:1005209/149‑1 (MQ=255) aTGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGGAAGTTTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGgag < 4:1500047/149‑1 (MQ=255) tGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGCTCGCG‑GCTGGGgaat < 1:1495527/149‑3 (MQ=255) ggATGAAACCCAACTACCCACATGGATTATGTGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCttt < 1:1637069/149‑1 (MQ=255) ggATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCttt < 3:667442/149‑1 (MQ=255) gATGAAACCCAACTACCCACATGGCTTATGAGCTGGCCGCTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGAGGAGATCTTTg < 3:1110666/149‑1 (MQ=255) gATGAAACCCAACTACCCACATGGATTATGTGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTg < 1:257598/149‑1 (MQ=255) gATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTg < 1:182378/149‑1 (MQ=255) tGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGt < 1:565266/149‑1 (MQ=255) tGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGt > 4:1650814/1‑149 (MQ=255) tGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGt > 1:1637934/1‑149 (MQ=255) gAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTc > 3:225119/1‑149 (MQ=255) aaaCCCAACTGCCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGCCCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCT‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCa > 4:1096258/1‑149 (MQ=255) aCCCAACGACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGc > 2:932686/1‑149 (MQ=255) cAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACg > 2:1356100/1‑149 (MQ=255) cccACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGc < 1:1119450/140‑1 (MQ=255) cccACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACt < 1:67289/149‑1 (MQ=255) cccACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGCAGATCTTTGGTCAGc > 2:1119450/1‑140 (MQ=255) ccACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCtt > 4:1203868/1‑131 (MQ=255) ccACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTg > 2:468293/1‑149 (MQ=255) cacaTGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTgc < 2:866009/149‑1 (MQ=255) acaTGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTgcg > 1:835827/1‑149 (MQ=255) caTGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTgcgc > 4:147899/1‑149 (MQ=255) aTGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGcc < 1:913902/149‑1 (MQ=255) aTGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGcc < 1:1208291/149‑1 (MQ=255) aTGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGcc > 3:943954/1‑149 (MQ=255) tGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATa > 4:811637/1‑149 (MQ=255) tGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCAGCCCAGGCCAGCGCGGTATTA‑CCGCACCAGCAATCCCCCAGC‑CGCGAGAGGGGGATATCTTTGGTCACCACGTTCACGGCCCCGTTTTCACaattc > 2:1545536/1‑146 (MQ=255) ggCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATAc > 2:261520/1‑149 (MQ=255) ggCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATAc > 3:1672325/1‑149 (MQ=255) gCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATAcc > 4:947752/1‑149 (MQ=255) ggtggtTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTc > 4:1011352/1‑149 (MQ=255) tCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGt < 3:969933/127‑1 (MQ=255) cTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATcc < 3:811637/149‑1 (MQ=255) tGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCa > 3:486806/1‑149 (MQ=255) tGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCATATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCa < 1:1332965/149‑1 (MQ=255) gTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAg < 3:613580/149‑1 (MQ=255) tAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGt > 2:1384997/1‑97 (MQ=255) tAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGt < 1:1384997/97‑1 (MQ=255) tAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGa < 2:1330383/149‑1 (MQ=255) aaGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGAt > 1:1039261/1‑149 (MQ=255) aaGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGAt > 1:1359765/1‑149 (MQ=255) gtgtCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGAt < 2:643373/147‑1 (MQ=255) gtgtCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGAt > 1:643373/1‑147 (MQ=255) gtgtCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATcc > 3:62082/1‑149 (MQ=255) tgtCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCg > 4:1505235/1‑149 (MQ=255) gtCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCgg > 1:335312/1‑149 (MQ=255) aGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTaaa < 4:712242/135‑1 (MQ=255) aGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTaaa > 3:712242/1‑135 (MQ=255) aGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCa < 1:468293/149‑1 (MQ=255) gTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCAt > 3:530994/1‑149 (MQ=255) ttCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATg > 4:447512/1‑149 (MQ=255) ttCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATg > 2:1207973/1‑149 (MQ=255) ttCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATg > 3:163200/1‑149 (MQ=255) tCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGc < 3:121234/149‑1 (MQ=255) tCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGc < 1:1307763/149‑1 (MQ=255) ccGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGcc > 3:105975/1‑149 (MQ=255) ccGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTc < 2:335312/149‑1 (MQ=255) gTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGt < 4:1308938/149‑1 (MQ=255) ttGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTg > 3:588999/1‑149 (MQ=255) ttGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTg > 1:55922/1‑149 (MQ=255) gTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGaa < 4:976516/149‑1 (MQ=255) tATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGaa < 1:1078088/148‑1 (MQ=255) tATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAAt < 2:55922/149‑1 (MQ=255) aTTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATg > 2:1172934/1‑149 (MQ=255) tttttCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGt < 2:679208/143‑1 (MQ=255) ttCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCaaa < 3:1011352/149‑1 (MQ=255) aGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCAc < 3:1526010/149‑1 (MQ=255) aGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTGTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCAc < 4:850057/149‑1 (MQ=255) ccATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGc < 3:924784/149‑1 (MQ=255) tGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGaa > 4:1324642/1‑134 (MQ=255) tGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGaa < 3:1324642/134‑1 (MQ=255) ccAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGt < 3:877628/149‑1 (MQ=255) aGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACTGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGttt > 3:1625048/1‑149 (MQ=255) aGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGttt > 4:1398984/1‑149 (MQ=255) gcCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAAt < 1:796942/149‑1 (MQ=255) ccGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGt < 3:446492/143‑1 (MQ=255) ccGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGt > 4:446492/1‑143 (MQ=255) tATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTccc > 4:945956/1‑149 (MQ=255) tATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTccc < 2:290409/149‑1 (MQ=255) cGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTaa < 2:1435333/149‑1 (MQ=255) gCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAAt > 2:779770/1‑149 (MQ=255) gCA‑CAGCCATTCCCCAGC‑AGTGAGCTGGGGAGATCTTTGGTCTGTACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAAt < 2:1328710/149‑1 (MQ=255) ccATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCa < 2:1046241/95‑1 (MQ=255) cATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGACCGCt > 4:488888/1‑149 (MQ=255) atctCCCCAGCTCGCG‑GCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCgg > 2:296077/4‑75 (MQ=37) atctCCCCAGCTCGCG‑GCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCgg < 1:296077/72‑1 (MQ=37) tCCCCAGCTCGCG‑GCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGACCGCTCCg > 2:911308/1‑149 (MQ=255) ccccAGCTCGCG‑GCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGACCGCTCCgg > 3:1513784/1‑149 (MQ=255) cccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGACCGCTCCGGc < 4:225119/149‑1 (MQ=255) cccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGACCGCTCCGGc < 3:1142977/149‑1 (MQ=255) cccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGACCGCTCCGGc < 1:1356100/149‑1 (MQ=255) ccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGACCGCTCCGGCa > 4:1021957/1‑149 (MQ=255) ccAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGACCGCTCCGGCa > 1:1619721/1‑149 (MQ=255) gaGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCCCTGCGCCGTTCTTACAAGTACCGTGAGAGGTTAAATGCAGATCCGGCCGTGCCGCTTCGGGAATGCCAGTCACGCCAGGTTTAATTCCCTCGCTCATGACCGCTCCGGCaa > 2:979064/2‑149 (MQ=255) | TCGATTGCGCATGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAAGTGTCAGTTCCGGACCGTTGTATTTTTCCAGCCATGCCAGCGCCGTATTACCCGCA‑CAGCCATTCCCCAGC‑CGCGAGCTGGGGAGATCTTTGGTCAGCACGTTCACTGCGCCGTTTTTACAAATACCGTCAGCGGTTAAATCCAGATCCGGCCATGCCCCTTCGTGAATGCAAATCACGCCAGGTTTAATTCCCTCGCTAATGACCGCTCCGGCAA > NC_000913/3714019‑3714308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |