| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,106,992 | G→A | 5.9% | intergenic (+22/+28) | nupG → / ← speC | nucleoside transporter/ornithine decarboxylase, constitutive |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,106,992 | 0 | G | A | 5.9% | 520.2 / 11.0 | 162 | intergenic (+22/+28) | nupG/speC | nucleoside transporter/ornithine decarboxylase, constitutive |
| Reads supporting (aligned to +/- strand): ref base G (78/73); new base A (3/7); total (81/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 165 total aligned reads displayed.
ACCGACTGGCAGACCGTATGGTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAA > NC_000913/3106845‑3107140 | cGACTGGCAGACCGTATGGTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCa > 3:1023444/1‑149 (MQ=255) cGACTGGCAGACCGTATGGTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCa > 1:1294711/1‑149 (MQ=255) tGGCAGACCGTATGGTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAg > 2:1123615/1‑149 (MQ=255) gCAGACCGTATGGTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGt > 1:422071/1‑149 (MQ=255) gACCGTATGGTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑c < 4:184094/149‑1 (MQ=255) tATGGTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGtt < 3:417035/149‑1 (MQ=255) aTGGTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCACCTTCTGGCGA‑CCCGttt < 1:175244/149‑1 (MQ=255) gTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGtttttt > 2:702212/1‑149 (MQ=255) gTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGtttttt > 3:697166/1‑149 (MQ=255) ttGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGttttttt > 4:867636/1‑149 (MQ=255) tGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCACCTTCTGGCGA‑CCCGtttttctt < 1:222170/149‑1 (MQ=39) gATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTa < 4:864874/149‑1 (MQ=255) gATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTa < 4:251254/149‑1 (MQ=255) aTTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCTCTAATGTCGCAAAGATAAACGGGTCACCTTCTGGCGT‑CCCGtttttctttg < 2:780343/149‑3 (MQ=255) aTTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTAt < 2:747984/149‑1 (MQ=255) tttCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTc < 4:697166/149‑1 (MQ=255) tCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCtt < 3:966242/149‑1 (MQ=255) cGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTa < 3:710489/149‑1 (MQ=255) gCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCTACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTAc < 4:1325818/149‑1 (MQ=255) cTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCACCTTCTGGCGA‑CCCGtttttctt < 3:880953/140‑1 (MQ=38) cTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCACCTTCTGGCGA‑CCCGtttttctt > 4:880953/1‑140 (MQ=38) tGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACtt > 3:136615/1‑149 (MQ=255) tGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACtt > 4:61218/1‑149 (MQ=255) ttACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCaa > 2:724458/1‑149 (MQ=255) tACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAac < 2:56700/149‑1 (MQ=255) tACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAac > 2:398202/1‑149 (MQ=255) tCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGaa > 4:468656/1‑115 (MQ=255) tCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGa > 2:825044/1‑120 (MQ=255) tCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAAcaca > 1:1543614/1‑149 (MQ=255) tCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAAcaca > 2:1612751/1‑149 (MQ=255) tCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCACCTTCTGGCGA‑CCCGtttttctttgc > 3:1529129/1‑132 (MQ=38) tCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCACCTTCTGGCGA‑CCCGtttttctttgc < 4:1529129/135‑4 (MQ=38) tCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGACGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAAcaca > 4:331209/1‑149 (MQ=255) tGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAAc < 4:1023444/149‑1 (MQ=255) tGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACa > 4:1286144/1‑149 (MQ=255) gCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAAc > 4:1140389/1‑149 (MQ=255) cTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGt > 3:1659939/1‑104 (MQ=255) cTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCg > 1:261379/1‑149 (MQ=255) ttCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGt > 1:1529215/1‑149 (MQ=255) ttCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGt > 2:1527024/1‑149 (MQ=255) tCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGtt < 3:299108/149‑1 (MQ=255) cgTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCa < 1:175983/149‑1 (MQ=255) gTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGt < 1:101823/98‑1 (MQ=255) gTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGt > 2:101823/1‑98 (MQ=255) tCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGc < 4:1380008/149‑1 (MQ=255) tCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGc < 3:1162069/149‑1 (MQ=255) tCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGc > 3:107647/1‑149 (MQ=255) tCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGc < 2:637144/149‑1 (MQ=255) ggCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCTACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATc < 1:1440931/149‑1 (MQ=255) ttCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCg < 2:377238/149‑1 (MQ=255) aaaTATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGtt < 1:398202/149‑1 (MQ=255) aaaTATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGtt < 1:724458/149‑1 (MQ=255) aaaTATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGtt > 4:1263983/1‑149 (MQ=255) aaaTATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGtt > 2:350891/1‑149 (MQ=255) aaTATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGG‑CCCGTCTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGttt < 3:976672/149‑1 (MQ=255) atatAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTc < 4:294339/149‑1 (MQ=255) ataAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGc < 2:284915/149‑1 (MQ=255) ataAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGc < 4:136615/149‑1 (MQ=255) taAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCt < 3:1233671/149‑1 (MQ=255) taAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCt < 1:36969/149‑1 (MQ=255) aaCACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCtat < 2:1447156/149‑1 (MQ=255) aaCACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCtat > 2:250706/1‑149 (MQ=255) aaCACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCtat > 3:514816/1‑149 (MQ=255) acacGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTAc < 3:810059/114‑1 (MQ=255) gTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAaca > 3:1004428/1‑149 (MQ=255) gtgtCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCtt < 1:1060328/149‑1 (MQ=255) gtgtCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCtt < 1:1669571/149‑1 (MQ=255) tCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTc < 3:639786/81‑1 (MQ=255) tCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCa > 3:274692/1‑149 (MQ=255) ccGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGc > 1:993212/1‑149 (MQ=255) cGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCt > 4:1115418/1‑149 (MQ=255) gACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTc > 2:1720901/1‑149 (MQ=255) gCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCg > 3:558439/1‑149 (MQ=255) acacaGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAGCCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGaa < 3:346618/149‑1 (MQ=255) acacaGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGaa > 2:1682219/1‑149 (MQ=255) acacaGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTCTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGaa > 4:326949/1‑149 (MQ=255) acaGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGaaaa > 4:1634010/1‑149 (MQ=255) gACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCACCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATcc < 1:1011406/149‑1 (MQ=255) ggTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCgg > 2:844384/1‑149 (MQ=255) ccACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGcaacaa > 2:413103/1‑149 (MQ=255) cACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACaaa < 4:717560/149‑1 (MQ=255) ttaaCGCAAAAAAAACCGGTCCGCCA‑AAGGTTACCCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCAc < 2:120121/146‑1 (MQ=255) aTTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCAc < 2:1294711/149‑1 (MQ=255) aTTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGATTCGCTATAAACACCTTGCAGCTCCGGc < 3:1447713/126‑1 (MQ=255) ttACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCAcc < 1:273519/149‑1 (MQ=255) aaaGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCcttct > 3:1476865/1‑149 (MQ=255) aaaGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCcttct > 4:1499380/1‑149 (MQ=255) aaaGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCcttct > 4:1432238/1‑149 (MQ=255) aaGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCAc < 4:744849/75‑1 (MQ=255) aaGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCcttctt > 1:911062/1‑149 (MQ=255) aaaaaaCGGGTCACCTTCTGGCGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGc < 4:1312619/106‑1 (MQ=37) aaaaaaCGGGTCACCTTCTGGCGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTcc > 3:997789/2‑149 (MQ=255) aaaaaCGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCa < 3:326949/149‑1 (MQ=255) aaaaaCGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCa < 1:751870/149‑1 (MQ=255) aaCGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGaaa < 2:669394/116‑1 (MQ=255) aaCGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGaaa > 1:669394/1‑116 (MQ=255) gggTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCaa < 4:1476865/149‑1 (MQ=255) gTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAgg < 4:721108/149‑1 (MQ=255) tCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACACAACCGAACAACAGTTGCACGCTATCCGCTTAGGTTTCGCTATAAACACCTTTCCGCTCCGGCGACAATCCCGGCGACTAATTCACCCCTTCTTCCAGTCCAAGGa > 4:225476/1‑149 (MQ=255) gCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGaaa > 4:393539/1‑149 (MQ=255) | ACCGACTGGCAGACCGTATGGTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAATTACGCAAAGAAAAACGGGTCGCCAGAAGGTGA‑CCCGTTTTTTTTATTCTTACTTCAACACATAACCGTACAACCGTTTCACGCCATCCGCATCGGTTTCGCTATAAACACCTTGCAGCTCCGGCGAAAATCCCGGCAACAAATTCACCCCTTCTTCCAGTGCAAGGAAA > NC_000913/3106845‑3107140 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |