| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,070,413 | T→G | 8.0% | intergenic (‑12/+102) | yihR ← / ← yihS | putative sulphoquinovose mutarotase/sulphoquinovose isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,070,413 | 0 | T | G | 8.0% | 599.8 / 26.9 | 184 | intergenic (‑12/+102) | yihR/yihS | putative sulphoquinovose mutarotase/sulphoquinovose isomerase |
| Reads supporting (aligned to +/- strand): ref base T (91/77); new base G (6/10); total (97/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 186 total aligned reads displayed.
CCTGAAAGGTTAATTCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCGCTGCAACCGCTGGAGCC > NC_000913/4070266‑4070560 | gAAAGGTTAATTCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAgg > 4:831560/1‑149 (MQ=255) aaaGGTTAATTCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGc < 4:1439842/149‑1 (MQ=255) ggTTAATTCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑a < 3:94368/149‑1 (MQ=255) ggTTAATTCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑a < 3:1566368/149‑1 (MQ=255) gTTAATTCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGGTAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑At < 3:1404626/149‑1 (MQ=255) tAATTCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACAT‑CAGCCTCACGGGAGGCTgtatgt < 3:762131/149‑6 (MQ=255) aaTTCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTc < 1:849699/149‑1 (MQ=255) aaTTCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTc < 2:796074/149‑1 (MQ=255) ttCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCaa > 3:151348/1‑149 (MQ=255) tCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACAT‑CAGCCTCACGGGAGGCTGTATGTcgt > 4:865834/1‑146 (MQ=255) gCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAAccc > 1:836428/1‑149 (MQ=255) gCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAAccc < 3:1356608/149‑1 (MQ=255) cAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCTGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACt > 1:499518/1‑149 (MQ=255) cAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACt > 3:282198/1‑149 (MQ=255) cAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACt > 4:706739/1‑149 (MQ=255) aGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTg < 1:1181157/149‑1 (MQ=255) gCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGc > 3:1549156/1‑149 (MQ=255) gCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGc < 3:434415/149‑1 (MQ=255) aCGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGa < 2:1261720/149‑1 (MQ=255) tCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGt > 1:19197/1‑149 (MQ=255) aaTGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGa > 2:1069557/1‑141 (MQ=255) aaTGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGa < 1:1069557/141‑1 (MQ=255) aTGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCt > 4:387165/1‑149 (MQ=255) tGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTc < 2:1500650/149‑1 (MQ=255) gTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGc < 2:966979/149‑1 (MQ=255) gcgTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGa > 3:862895/1‑103 (MQ=255) gTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCtt > 1:1377408/1‑149 (MQ=255) tGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCttt < 4:457215/149‑1 (MQ=255) tGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCttt > 2:1050379/1‑149 (MQ=255) tGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCttt < 2:143725/149‑1 (MQ=255) tAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg < 2:1663678/149‑1 (MQ=255) tAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg < 3:1579397/149‑1 (MQ=255) aaTCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTgggg > 2:388532/1‑149 (MQ=255) tCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGga < 3:526237/148‑1 (MQ=255) cccccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGgaga < 2:1572296/149‑1 (MQ=255) cccccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGgaga < 1:779516/149‑1 (MQ=255) cccccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGgaga < 4:154071/149‑1 (MQ=255) ccccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAAGGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGagag > 2:427042/1‑149 (MQ=255) ccccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑ACAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGagag < 4:1075150/149‑1 (MQ=255) ccccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGagag > 4:1260580/1‑149 (MQ=255) cccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg > 4:1145133/1‑149 (MQ=255) cccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg > 1:1465397/1‑149 (MQ=255) cccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg > 3:1462289/1‑149 (MQ=255) cccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg < 1:427042/149‑1 (MQ=255) cccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg > 3:780058/1‑149 (MQ=255) ccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAggg > 2:814519/1‑149 (MQ=255) ccGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTACCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAggg > 4:1348282/1‑149 (MQ=255) cgGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTa < 3:387165/149‑1 (MQ=255) ggCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAg < 1:990195/149‑1 (MQ=255) aaGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGga < 2:851543/149‑1 (MQ=255) aaGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGga > 3:1616708/1‑149 (MQ=255) gAAACTGTCTGTCCACTGCAATGCATATTGGTGATTAGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGGCCCTTTGGGGAGAGGGTTAGGGAGAgg < 4:282166/149‑1 (MQ=255) gAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTgg > 1:1144312/1‑130 (MQ=255) gAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTgg < 2:1144312/130‑1 (MQ=255) gAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgg < 2:1418600/149‑1 (MQ=255) gAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgg < 3:1260580/149‑1 (MQ=255) gcGGTCTGCCCGCGCCAATGCAAATGGGGGATTTGCATACAAGGCACCTAAATTAACGCCATACAGCCTCCCGGGAGGCTG‑ATGTAAAACCC‑AAAAACTGCACCGGACGGCCCCCTCGCCCCTTTGGGGAGAGGGTGAGGGAGAGGGGa < 4:1549156/148‑1 (MQ=255) tCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAc > 1:309831/1‑149 (MQ=255) tCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAggg < 4:1570552/139‑1 (MQ=255) aCTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 4:1602388/1‑117 (MQ=255) tGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTAtttt > 4:545243/1‑149 (MQ=255) cATATTGTTGATTTGCATACAAGGCCCATTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAACCTGCACCGGACGGCCCCCTCGCCCCTTTGGGGGGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCa < 3:1599614/149‑1 (MQ=39) cATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCa > 3:334392/1‑149 (MQ=255) cATATTGGTGATTTGCAAACAAGGCACCTTAATTAACAACATACCGCCTCCCGGGAGGCTG‑ATGCCAAACCC‑AAAAACTGCCCCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCa < 3:1395246/149‑1 (MQ=38) cATATTGGGGATTTGCAAACAAGGCACCTAAATTAACGACACACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGCCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCa < 4:1345926/149‑1 (MQ=39) ttGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATc > 3:75216/1‑149 (MQ=255) tGGTGATTTGCATACAAGGCACCTTAATTAACGACATACACCCCCCCGGGGGGCTG‑ATGTAAAACCC‑AAAAACCGCCCCGGACGGTCCCCCCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCa < 1:463657/149‑1 (MQ=38) gTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGt > 2:757405/1‑149 (MQ=255) tGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGG‑TAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTa > 2:58711/1‑149 (MQ=255) aTTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTccc < 1:142270/84‑1 (MQ=255) gCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCtt < 4:1687184/90‑1 (MQ=255) aTACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCa < 3:1649199/149‑1 (MQ=255) aTACAAGGCACCTTAATTAACAACATACAGCCTCCCGTGTGGGTG‑ATGTCAAACCG‑AAAAGCTGCACAGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCa < 3:173649/149‑1 (MQ=38) aCAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGccc < 4:758069/83‑1 (MQ=255) cAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTa > 4:646457/1‑149 (MQ=255) aCCTTAATTAACGACATACAGCCTCCTGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATcc > 2:1286598/1‑149 (MQ=255) aCCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATcc > 4:1633567/1‑149 (MQ=255) ccTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCCAAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATcc > 1:694804/1‑149 (MQ=255) cTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCcag < 4:85663/149‑1 (MQ=255) cTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCcag > 1:1399647/1‑149 (MQ=255) cTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCcag > 1:1634505/1‑149 (MQ=255) cTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCcag > 2:1326232/1‑149 (MQ=255) cTTAATTAACGACATACAGCCCCCCGGGAGGCTG‑ATGTCAAACCC‑AAAACCTGCCCCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCcag < 3:706739/149‑1 (MQ=255) aattaaCGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCcagcag > 1:1299457/1‑149 (MQ=255) attaaCGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACGGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGa < 4:593428/149‑1 (MQ=255) ttaaCGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGAc > 2:730652/1‑149 (MQ=255) gtaaCGACATACAGCCGCCCTTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCAACGGACGGGCACCTTGCCCCTTTGGGGAGAGGCTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCATTTATTTCGCGTTAATGTCCAGCAGAc > 2:215713/2‑149 (MQ=255) aCGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCg > 1:576399/1‑149 (MQ=255) gACATCCCGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAACCTGCACCGGACGGTCCCCTCGCCCTTTTGGGGAGAGGGTTGGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCGCt < 2:1634505/149‑1 (MQ=255) aTACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCGCTGCa > 1:530781/1‑149 (MQ=255) tACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTc < 1:1367300/51‑1 (MQ=255) atcAGCCTCACGGGAGGCTGTATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCGCTGCa > 3:1430324/3‑149 (MQ=39) atcAGCCTCACGGGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATcc > 4:412314/3‑133 (MQ=255) atcAGCCTCACGGGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATcc < 3:412314/131‑1 (MQ=255) atcAGCCTCACGGGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCGCTGCaa > 2:541496/3‑149 (MQ=255) gCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCGCTGCAACCGc < 3:566144/149‑1 (MQ=255) ccTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCGCTGCAACCGCt < 4:28758/149‑1 (MQ=255) tCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCGCTGCAACCGCTgg > 1:1204140/1‑149 (MQ=255) cccGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCGCTGCAACCGCTGGa < 2:1374752/149‑1 (MQ=255) tGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCGCTGCAACCGCTGGAGcc > 1:1008682/1‑148 (MQ=255) | CCTGAAAGGTTAATTCAGCCAGACCAGCACCGACGGTCACAATGGTCGCGTGATAATCCCCCGCGGCAAGTGAAACGGTCTGTCCACTGCAATGCATATTGGTGATTTGCATACAAGGCACCTTAATTAACGACATACAGCCTCCCGTGAGGCTG‑ATGTCAAACCC‑AAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACCCGCACCCTATTTTCAGATCAGTTATTTCGCATTAATATCCAGCAGACCCGCTGCAACCGCTGGAGCC > NC_000913/4070266‑4070560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |