| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,390,016:1 | +C | 5.4% | intergenic (+52/+32) | yfbP → / ← nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,390,016 | 1 | . | C | 5.4% | 571.2 / 26.5 | 129 | intergenic (+52/+32) | yfbP/nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| Reads supporting (aligned to +/- strand): ref base . (67/55); new base C (3/4); total (70/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.76e-01 | |||||||||||
Only 100 of 132 total aligned reads displayed.
CAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCC > NC_000913/2389869‑2390163 | cAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑t > 2:911046/1‑149 (MQ=255)cAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑t < 4:710216/149‑1 (MQ=255)cAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCCTCTTTTTCAGAAAAACCGCCGAGCATG‑t > 2:680138/1‑149 (MQ=255) aCGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑Tcggcg > 1:362488/1‑149 (MQ=255) cGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCCGAAAAACCGCCGACATTC‑Tcggcgg < 2:591647/149‑1 (MQ=255) cGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTcggcgg < 4:206964/149‑1 (MQ=255) cTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGA‑CATGCTcggcggtt < 3:789530/149‑3 (MQ=255) tATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑Ctt > 3:302104/1‑149 (MQ=255) aTGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑Cttt < 2:124608/149‑1 (MQ=255) gATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCt < 3:46740/149‑1 (MQ=255) gATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCt < 3:311482/149‑1 (MQ=255) gATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCt < 1:792523/149‑1 (MQ=255) ttttAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGa < 2:312382/149‑1 (MQ=255) ttttAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGa < 2:550503/149‑1 (MQ=255) ttttAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGa < 4:396254/149‑1 (MQ=255) ttttAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCCTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGa > 3:192104/1‑149 (MQ=255) atatCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTAc > 2:742912/1‑149 (MQ=255) tatCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACa > 4:763648/1‑149 (MQ=255) tatCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACa > 2:476602/1‑149 (MQ=255) tCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACaaa < 1:228268/149‑1 (MQ=255) tCGATGAACGGCGGGCAAATTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACTCAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCACAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACtaa > 4:252108/1‑149 (MQ=255) cGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCCTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAg < 4:192104/149‑1 (MQ=255) tGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGa > 4:864374/1‑149 (MQ=255) gggCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTAc < 4:113308/149‑1 (MQ=255) gCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCt < 3:203144/125‑1 (MQ=255) gCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCt > 4:203144/1‑125 (MQ=255) aaaaTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTa < 3:191162/144‑1 (MQ=255) aaaaTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTa > 4:191162/1‑144 (MQ=255) aaaaTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCa > 3:729702/1‑149 (MQ=255) aTTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCg > 3:163520/1‑149 (MQ=255) ggCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCAtt < 4:869782/149‑1 (MQ=255) cAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGc < 4:199832/149‑1 (MQ=255) aGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGcc > 1:501721/1‑149 (MQ=255) agagTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTGCTGTTTCAGAAAATCCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACaa < 3:252108/149‑1 (MQ=255) gATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCgg > 1:914840/1‑149 (MQ=255) aTAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGt > 1:8208/1‑149 (MQ=255) tAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGtt > 4:693201/1‑149 (MQ=255) gTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgt < 4:577305/149‑1 (MQ=255) tCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtgtg > 1:175738/1‑149 (MQ=255) cGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTgg < 3:708252/149‑1 (MQ=255) tACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGcc > 1:508192/1‑149 (MQ=255) cacaGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCAt < 2:501721/149‑1 (MQ=255) cacaGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCAt < 2:101656/149‑1 (MQ=255) gTTCACTTAACTCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCAAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGcc > 1:774461/1‑143 (MQ=255) gTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATacac > 4:872835/1‑149 (MQ=255) ttCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAAc > 3:397462/1‑115 (MQ=255) ttCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACAcc > 2:815660/1‑149 (MQ=255) atCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACAcc > 1:602760/2‑149 (MQ=255) aCTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAg > 3:478744/1‑149 (MQ=255) ttAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCa > 2:666629/1‑149 (MQ=255) ttAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCa > 1:750976/1‑149 (MQ=255) ttAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCa > 2:912548/1‑149 (MQ=255) aaCGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑Cttt < 4:375919/65‑1 (MQ=255) aaCGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑Cttt > 3:375919/1‑65 (MQ=255) aaCGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAcc > 1:75445/1‑149 (MQ=255) cGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAg > 2:999/1‑149 (MQ=255) gCTCTGCGTCTATCTACTATCCATTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CGTTCTGACTTACCAAGTAACAGATTACATCAGCGGCATTGCCGAACGCACGATGCTAATCAGCGGTTGTGGCCATACACCCAGCATCAGt > 4:778424/1‑149 (MQ=255) ctctGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTa < 2:362488/149‑1 (MQ=255) tctGCGTCTATCTACTATCCCCTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTAc < 1:680138/149‑1 (MQ=255) gCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCaa < 2:669529/149‑1 (MQ=255) cGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAAc < 2:450402/149‑1 (MQ=255) gTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACa > 2:41604/1‑149 (MQ=255) tatctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTg > 1:414197/1‑149 (MQ=255) tatctaCTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTg < 2:760802/149‑1 (MQ=255) tactaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCaga < 1:198391/149‑1 (MQ=255) tactaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCaga > 4:286916/1‑149 (MQ=255) ctaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAgaga > 3:696564/1‑149 (MQ=255) ctaTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAgaga > 2:60285/1‑149 (MQ=255) taTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGAt > 4:221876/1‑149 (MQ=255) taTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGAt < 3:291009/149‑1 (MQ=255) aTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATc < 4:706424/149‑1 (MQ=255) aTCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATc < 4:11940/149‑1 (MQ=255) cccTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAg < 4:753827/149‑1 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGca > 3:359115/1‑149 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGca > 4:613497/1‑149 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGca > 1:646715/1‑149 (MQ=255) cttcttTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGca > 4:127974/1‑149 (MQ=255) ttcttTTTCAGGAAAAGCACCGAGCATG‑TCGGCGG‑CTGTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGcac > 2:832024/1‑149 (MQ=255) tcattttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGcaca < 3:613497/146‑1 (MQ=255) tttttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAAc < 1:639279/149‑1 (MQ=255) ttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGAt < 1:20572/149‑1 (MQ=255) ttCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGAt < 3:763648/149‑1 (MQ=255) agtcagaaagCCGCCGA‑CATGCTCGGCGGTTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGa > 2:775984/7‑149 (MQ=38) aGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATGAGCGGCATTGCCAAACGCACAATGCTAATCAGTGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAcc > 4:2274/1‑149 (MQ=255) aGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAcc > 2:427057/1‑114 (MQ=255) aGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCAcc < 1:427057/114‑1 (MQ=255) aGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAcc > 4:291841/1‑149 (MQ=255) gAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 1:130980/1‑149 (MQ=255) gAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 2:174822/1‑149 (MQ=255) gAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg > 4:388400/1‑149 (MQ=255) gAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAAATCAGCACAACGATAccg > 4:572032/1‑149 (MQ=255) aaaaaCCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgc > 1:483675/1‑149 (MQ=255) aaagCCGCCGA‑CATGCTCGGCGGTTTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgc > 3:575255/1‑149 (MQ=255) aaaaCCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATa < 2:760863/144‑1 (MQ=255) agccgccgA‑CATGCTCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACACTGCTAATCAGCGGtt < 2:212377/87‑1 (MQ=255) aaCCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccgcccg > 2:438260/1‑149 (MQ=255) cgccgAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCgcgc > 3:695901/1‑149 (MQ=255) cgccgAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCgcgc > 3:773110/1‑149 (MQ=255) cgAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGt > 1:309103/1‑149 (MQ=255) aTG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGc > 1:238918/1‑149 (MQ=255) | CAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATG‑TCGGCGG‑CTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCC > NC_000913/2389869‑2390163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |