| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 874,623 | Δ1 bp | 5.5% | coding (1645/2349 nt) | yliE → | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 874,623 | 0 | C | . | 5.5% | 392.9 / 15.9 | 109 | coding (1645/2349 nt) | yliE | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base C (52/51); new base . (3/3); total (55/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
TGGCGATTTCCAGTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTATCAATGAGCTGGGTTATCA > NC_000913/874477‑874765 | tgGCGATTTCCAGTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCg > 1:1114790/1‑149 (MQ=255) tttCCAGTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGTGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑Gtt < 1:1223219/149‑1 (MQ=255) tCCAGTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGa > 1:1634039/1‑149 (MQ=255) aGTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGatat < 1:970327/149‑1 (MQ=255) gTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATAtt > 1:945190/1‑149 (MQ=255) gTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAA‑CGATCGGTTGat < 3:450218/146‑1 (MQ=255) gTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAA‑CGATCGGTTGat > 4:450218/1‑146 (MQ=255) tCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAac < 2:395716/149‑1 (MQ=255) gTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGGAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGatat > 3:1492670/1‑142 (MQ=255) gTGACCATACGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACAcc > 4:1800409/1‑149 (MQ=255) atatGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGcc > 3:1359290/1‑149 (MQ=255) tatGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCa > 3:1824733/1‑149 (MQ=255) ttCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCt > 4:896155/1‑149 (MQ=255) tcAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTggg > 2:1203823/1‑149 (MQ=255) tcAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTggg > 4:787269/1‑149 (MQ=255) tcAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTggg < 1:1081618/149‑1 (MQ=255) tcAGAGTTTATCTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTCTCAACCGATC‑GTTGGTATTAACACCCGCGCCATTCTggg > 3:1244752/1‑149 (MQ=255) agagTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGgcg > 2:1354448/1‑149 (MQ=255) agagTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGgcg > 2:281329/1‑149 (MQ=255) tttATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGa > 3:724663/1‑149 (MQ=255) ttATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAg < 3:787269/149‑1 (MQ=255) ttCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGtt < 3:896155/149‑1 (MQ=255) gtgATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGc < 1:1203823/149‑1 (MQ=255) tgaCGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGtt > 2:62050/1‑149 (MQ=255) tgaCGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGtt < 1:1354448/149‑1 (MQ=255) aCGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTGATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTgg < 4:1244752/149‑1 (MQ=255) cgcgAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTggg < 1:281329/149‑1 (MQ=255) gcgAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTaa < 1:381801/107‑1 (MQ=255) gcgAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCgcgc < 2:1542799/116‑1 (MQ=255) gcgAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCgcgc > 1:1542799/1‑116 (MQ=255) gAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAac > 3:809836/1‑106 (MQ=255) gAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAac < 4:809836/106‑1 (MQ=255) aaaCTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTc < 2:1634039/149‑1 (MQ=255) tCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCg > 1:1804288/1‑149 (MQ=255) aaCGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTaa > 3:1118470/1‑98 (MQ=255) aaCGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTaa < 4:1118470/98‑1 (MQ=255) aaCGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAacac > 4:152205/1‑101 (MQ=255) aaCGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAacac < 3:152205/101‑1 (MQ=255) aaCGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGa > 4:1232986/1‑149 (MQ=255) aaCGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGa > 2:351216/1‑149 (MQ=255) gAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCg > 1:1111653/1‑149 (MQ=255) aaaTAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCgg < 1:351216/149‑1 (MQ=255) agaagaGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAAc > 3:377563/1‑74 (MQ=255) gaagaGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCa > 2:343873/1‑100 (MQ=255) gaagaGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCa < 1:343873/100‑1 (MQ=255) gaagaGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTgg > 4:646567/1‑129 (MQ=255) gaagaGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTgg < 3:646567/129‑1 (MQ=255) gagaATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCAt < 4:1824733/149‑1 (MQ=255) gaATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGata < 3:1519725/80‑1 (MQ=255) gaATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGata > 4:1519725/1‑80 (MQ=255) gaATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCAttt > 2:1026263/1‑149 (MQ=255) aaTATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTc > 4:247049/1‑149 (MQ=255) aaTATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTc > 3:1088863/1‑149 (MQ=255) atCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGc > 2:983577/1‑114 (MQ=255) atCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGc < 1:983577/114‑1 (MQ=255) tCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTg > 2:912682/1‑118 (MQ=255) tCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTg < 1:912682/118‑1 (MQ=255) cTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGc < 3:247049/149‑1 (MQ=255) ggATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTg < 3:1800409/149‑1 (MQ=255) aTTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGaa > 1:538494/1‑149 (MQ=255) ttGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAg > 4:844467/1‑149 (MQ=255) gcgTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCa > 2:1382604/1‑149 (MQ=255) cgTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCAt < 2:1804288/149‑1 (MQ=255) gTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTtgt > 1:1353844/1‑99 (MQ=255) gTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTtgt < 2:1353844/99‑1 (MQ=255) aaTATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTg < 1:1744981/58‑1 (MQ=255) aaTATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTg > 2:1744981/1‑58 (MQ=255) aaTATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTaa > 4:1397981/1‑65 (MQ=255) aaTATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTaa < 3:1397981/65‑1 (MQ=255) atTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCgggg < 3:1524483/119‑1 (MQ=255) atTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCgggg > 4:1524483/1‑119 (MQ=255) atTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCgg < 2:1830911/117‑1 (MQ=255) atTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCgg > 1:1830911/1‑117 (MQ=255) ttCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCAtt > 1:401699/1‑149 (MQ=255) cGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCAttac < 2:538494/149‑3 (MQ=255) cATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGa > 1:177670/1‑149 (MQ=255) aTGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGaa < 4:1088863/149‑1 (MQ=255) aTGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGaa < 3:1232986/149‑1 (MQ=255) cAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCggg > 2:375452/1‑108 (MQ=255) cAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCggg < 1:375452/108‑1 (MQ=255) aTGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGatat < 2:1111653/149‑1 (MQ=255) ggAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCg < 1:62050/149‑1 (MQ=255) ttGGCGAACTATTCCTCGTATATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGttt > 3:1117287/1‑149 (MQ=255) gCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTa > 1:423133/1‑147 (MQ=255) gCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTa < 2:423133/147‑1 (MQ=255) gAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGatat < 2:318154/137‑1 (MQ=255) tATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCggg > 2:1457546/1‑90 (MQ=255) tATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCAcc < 4:1450108/103‑1 (MQ=255) ccTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTATCAATGAGCTgg < 1:1382604/149‑1 (MQ=255) cTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTATCAATGa < 3:799898/143‑1 (MQ=255) cTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTATCAATGa > 4:799898/1‑143 (MQ=255) tCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCgg > 1:581847/1‑127 (MQ=255) tCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCgg < 2:581847/127‑1 (MQ=255) cTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTcg > 3:1790534/1‑90 (MQ=255) cTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTATGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCa < 4:1790534/91‑1 (MQ=255) atATCAA‑CGATCGGTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGaa < 4:258904/117‑1 (MQ=255) tATCAA‑CGATCGGTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGa > 1:188547/1‑116 (MQ=255) tATCAA‑CGATCGGTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGa < 2:188547/116‑1 (MQ=255) aCCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGat > 2:584746/1‑115 (MQ=255) ccGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTATCaa < 3:971650/128‑1 (MQ=255) | TGGCGATTTCCAGTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATC‑GTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTATCAATGAGCTGGGTTATCA > NC_000913/874477‑874765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |