| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,937,048:1 | +C | 6.2% | coding (1465/1776 nt) | fucI → | L‑fucose isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,937,048 | 1 | . | C | 6.2% | 1019.2 / 59.9 | 227 | coding (1465/1776 nt) | fucI | L‑fucose isomerase |
| Reads supporting (aligned to +/- strand): ref base . (110/103); new base C (6/8); total (116/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
Only 100 of 235 total aligned reads displayed.
ATACTTCCGTGGCGGCGGTTACTCTTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGACCATCGGCCACGTTGGCGC > NC_000913/2936900‑2937196 | tACTTCCGTGGCGGCGGTTACTCTTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑a < 1:1703469/149‑1 (MQ=255) ttCCGTGGCGGCGGTTACTCTTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACAt > 4:347064/1‑149 (MQ=255) ccGTGGCGGCGGTTACTCTTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATcc < 3:1571670/149‑1 (MQ=255) cGTGGCGGCGGTTACTCTTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCt < 1:530501/149‑1 (MQ=255) ggcggcGGTTACTCTTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGT‑CATGCACATCCttcg < 1:264835/149‑4 (MQ=255) gcggTTACTCTTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACaaa < 1:237876/149‑1 (MQ=255) ttACTCTTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCa > 4:1684054/1‑149 (MQ=255) tctTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCaa < 1:787248/149‑1 (MQ=255) ttCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACt > 3:1539331/1‑149 (MQ=255) ttCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGT‑CATGCACATCCttcg < 1:405448/135‑4 (MQ=255) ttCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCAAGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑AAATCCTCAACAAACGCACCAACt > 4:1562046/1‑149 (MQ=255) cccGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAAc < 1:70972/146‑1 (MQ=255) cccGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAAc > 2:70972/1‑146 (MQ=255) ccGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCaa > 3:1505024/1‑149 (MQ=255) tCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTgg < 1:1180603/149‑1 (MQ=255) ccGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAacc > 4:466517/1‑149 (MQ=255) ggcggcGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTg < 3:1882869/149‑1 (MQ=255) ggcgTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGtt < 1:732318/149‑1 (MQ=255) gcgTCCCGTTCACCGTGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAAc > 1:1004108/1‑117 (MQ=255) ccGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAac > 1:1864918/1‑134 (MQ=255) ccGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAac < 2:1864918/134‑1 (MQ=255) ccGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCAcc > 4:428563/1‑149 (MQ=255) ccGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCAcc > 2:566509/1‑149 (MQ=255) gTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAacc < 3:585124/133‑1 (MQ=255) tCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCgcgc < 1:1654567/149‑1 (MQ=255) tCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCgcgc < 3:466517/149‑1 (MQ=255) ccATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTc > 2:687012/1‑149 (MQ=255) ccATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTc > 2:1652829/1‑149 (MQ=255) ccATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTc > 4:1508189/1‑149 (MQ=255) cATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCa > 1:1536632/1‑149 (MQ=255) cATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCa > 4:1577465/1‑149 (MQ=255) aTGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCaa > 2:739789/1‑115 (MQ=255) aTGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCAc < 3:756050/149‑1 (MQ=255) gACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCg > 4:137583/1‑149 (MQ=255) aCTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCgg > 2:398644/1‑149 (MQ=255) tCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCt > 4:710052/1‑90 (MQ=255) tCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCt < 3:710052/90‑1 (MQ=255) tCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCaa < 4:456198/119‑1 (MQ=255) tCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTa > 4:643757/1‑149 (MQ=255) tCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTa > 3:856535/1‑149 (MQ=255) tgtCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACTACCTGGTTTGCACCGCGCCTCACCGGTAAAg > 3:909765/1‑149 (MQ=255) tCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAggg < 2:1751905/149‑1 (MQ=255) aaCATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGcc > 2:1166690/1‑149 (MQ=255) aaCATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTAGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGcc > 2:1594447/1‑149 (MQ=255) aCATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCg > 4:309829/1‑149 (MQ=255) atcatcAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGtt > 4:139127/1‑149 (MQ=255) atcaAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTAc < 2:233187/149‑1 (MQ=255) atcaAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAACGGCCCTTTAc < 4:856535/149‑1 (MQ=255) tcaAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACg > 2:468400/1‑149 (MQ=255) tcaAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACg > 3:1803482/1‑149 (MQ=255) ggCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGAtgt < 2:1323641/149‑1 (MQ=255) tGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTAc > 1:1415006/1‑149 (MQ=255) gggACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACt > 1:933480/1‑149 (MQ=255) ggACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTc < 2:1415006/149‑1 (MQ=255) ggACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTc < 1:566509/149‑1 (MQ=255) gACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCg < 2:1022444/149‑1 (MQ=255) cTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAg < 2:992356/118‑1 (MQ=255) cTGCAAATCGCAGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAg > 1:992356/1‑118 (MQ=255) tGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCg > 2:409556/1‑149 (MQ=255) tGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCg < 1:468400/149‑1 (MQ=255) tGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCg > 1:887201/1‑149 (MQ=255) tGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGT‑CATGCACATCCttc > 2:869357/1‑55 (MQ=25) cAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATgtgt > 4:1141449/1‑133 (MQ=255) cAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGaa > 2:1507398/1‑149 (MQ=255) cAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTCCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGaa < 1:1641109/149‑1 (MQ=255) aaaTCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTc > 1:1808209/1‑70 (MQ=255) aaaTCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTc < 2:1808209/70‑1 (MQ=255) aaaTCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTc > 2:1768358/1‑136 (MQ=255) aaaTCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTc < 1:1768358/136‑1 (MQ=255) cgcgGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTggg < 1:748390/149‑1 (MQ=255) cgcgGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTGGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTggg < 4:1803482/149‑1 (MQ=255) cgGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTaa < 3:658066/135‑1 (MQ=255) cTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAAcc > 4:706811/1‑149 (MQ=255) ggAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACGGAGGCGCTAACCAt < 3:137583/149‑1 (MQ=255) gAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATg < 1:398644/149‑1 (MQ=255) aGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATgg < 1:1507398/149‑1 (MQ=255) aGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATgg < 3:309829/149‑1 (MQ=255) gTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGt > 1:767237/1‑149 (MQ=255) tGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGtt > 4:93225/1‑149 (MQ=255) ggAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTc < 1:1344077/149‑1 (MQ=255) gAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATgggg < 2:89655/145‑1 (MQ=255) gAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCt < 2:767237/149‑1 (MQ=255) gAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCt < 1:284763/149‑1 (MQ=255) aTTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGa < 1:1037965/149‑1 (MQ=255) tGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAggg < 4:1077467/89‑1 (MQ=255) tGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAggg > 3:1603898/1‑89 (MQ=255) cGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTgg > 3:380379/1‑122 (MQ=255) cGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGACCATc > 2:1069743/1‑149 (MQ=255) cGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGACCATc > 1:1304762/1‑149 (MQ=255) gAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGACCATCg > 3:1626112/1‑149 (MQ=255) gAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGACCATCg < 1:692619/149‑1 (MQ=255) gATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCt > 3:110350/1‑52 (MQ=255) aTGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTa > 2:551862/1‑75 (MQ=255) tgtgCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGaa > 4:22580/1‑111 (MQ=255) cATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTc > 2:342935/1‑130 (MQ=255) cATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGACCATCGGCCACGTTgg > 4:1119178/1‑149 (MQ=255) cATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGACCATCGGCCACGTTgg < 3:428563/149‑1 (MQ=255) g‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACg < 2:1577097/81‑1 (MQ=255) g‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACg > 1:1577097/1‑81 (MQ=255) g‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGACCATCGGCCACGTTGgcgc > 4:1710758/1‑149 (MQ=255) | ATACTTCCGTGGCGGCGGTTACTCTTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATG‑ACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGACCATCGGCCACGTTGGCGC > NC_000913/2936900‑2937196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |