BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 190654	137 (0.730)	9 (0.050)	7/228	NT	6.6%	intergenic (+55/‑203)	rpsB/tsf	30S ribosomal subunit protein S2/translation elongation factor EF‑Ts
*	?	NC_000913	= 190695	123 (0.690)	9 (0.050)	7/228	NT	6.6%	intergenic (+96/‑162)	rpsB/tsf	30S ribosomal subunit protein S2/translation elongation factor EF‑Ts

Only 100 of 172 total aligned reads displayed.

CCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGCCTGCATATGGCCCCCTTTTTCAC  >  NC_000913/190506‑190802

ccTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCG                                                                                                                                                      >  4:1274932‑M1/1‑149 (MQ=255)

         gggCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTccc                                                                                                                                             <  4:1821209/149‑1 (MQ=255)

                gTTGCTGTAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAAtt                                                                                                                                                >  2:569404/1‑139 (MQ=255)

                 ttGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCtt                                                                                                                                     >  3:722298/1‑149 (MQ=255)

                 ttGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCtt                                                                                                                                     <  1:1441493/149‑1 (MQ=255)

                    ctgcAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACa                                                                                                                                  >  1:1026579/1‑149 (MQ=255)

                    ctgcAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACa                                                                                                                                  <  1:1356444/149‑1 (MQ=255)

                     tgcAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACAt                                                                                                                                 <  3:1264334/149‑1 (MQ=255)

                           cGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTaa                                                                                                                           <  2:3739/149‑1 (MQ=255)

                                gTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCgg                                                                                                                                           >  4:448736/1‑128 (MQ=255)

                                gTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCgg                                                                                                                                           <  3:448736/128‑1 (MQ=255)

                                 tGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGagaattcccggtcacttactgatgtaagctccc                                                                                                                     <  3:1274932‑M1/149‑34 (MQ=255)

                                  gAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTaa                                                                                                                           >  1:1453580/1‑142 (MQ=255)

                                      gCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGAt                                                                                                                >  2:638896/1‑149 (MQ=255)

                                       ccGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATg                                                                                                               >  3:1879925/1‑149 (MQ=255)

                                         gTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTTAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGCTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATgag                                                                                                             >  4:690131/1‑149 (MQ=255)

                                          ttCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGctcatcccggtcacttactgatgtaagctcccgggaattctc                                                                                                            <  1:1851754‑M1/149‑43 (MQ=255)

                                             tcAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCggg                                                                                                                  <  3:184110/140‑1 (MQ=255)

                                                 gATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGaa                                                                                                     <  1:1418745/149‑1 (MQ=255)

                                                      ggCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATaa                                                                                                >  3:1493777/1‑149 (MQ=255)

                                                         ttCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGt                                                                                                                         <  4:1482236/121‑1 (MQ=255)

                                                         ttCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGt                                                                                                                         >  3:1482236/1‑121 (MQ=255)

                                                         ttCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCgg                                                                                                                   <  4:1144373/127‑1 (MQ=255)

                                                          tCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCa                                                                                            <  3:690131/149‑1 (MQ=255)

                                                            ccAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGa                                                                                                                                         <  2:1493575/102‑1 (MQ=255)

                                                              aGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGa                                                                                                   >  3:1777163/1‑138 (MQ=255)

                                                              aGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGa                                                                                                   <  4:1777163/138‑1 (MQ=255)

                                                              aGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTg                                                                                        >  2:729799/1‑149 (MQ=255)

                                                                 cGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCgg                                                                                                                   <  1:1186665/119‑1 (MQ=255)

                                                                 cGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCgg                                                                                                                   >  2:1186665/1‑119 (MQ=255)

                                                                 cGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTgcgg                                                                                     >  4:953611/1‑149 (MQ=255)

                                                                    aagaaAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGgcgc                                                                                  >  2:229999/1‑149 (MQ=255)

                                                                      gaaAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGctcatcccggtcacttactgatgtaagctccc                                                                                                                      <  4:243679‑M1/111‑33 (MQ=255)

                                                                      gaaAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGctcatcccggtcacttactgatgtaagctccc                                                                                                                      >  3:243679‑M1/1‑79 (MQ=255)

                                                                           cTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGctcatcccggtcacttactgatgtaagctccc                                                                                                                      >  1:396322‑M1/1‑74 (MQ=255)

                                                                           cTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGctcatcccggtcacttactgatgtaagctccc                                                                                                                      <  2:396322‑M1/106‑33 (MQ=255)

                                                                              cGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGaa                                                                        <  1:729799/149‑1 (MQ=255)

                                                                               gTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAg                                                                       >  2:1556266/1‑149 (MQ=255)

                                                                                tAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTaa                                                                                                                           <  2:168078/96‑1 (MQ=255)

                                                                                tAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTaa                                                                                                                           >  1:168078/1‑96 (MQ=255)

                                                                                tAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGa                                                                                                                 <  4:1184782/106‑1 (MQ=255)

                                                                                 aGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAggg                                                                     <  4:722298/149‑1 (MQ=255)

                                                                                     gCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGgag                                                                 <  1:574361/149‑1 (MQ=255)

                                                                                      cTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGgaga                                                                <  4:1435766/149‑1 (MQ=255)

                                                                                       tGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGaa                                                                                                     <  2:1206300/111‑1 (MQ=255)

                                                                                       tGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGaa                                                                               >  4:1847529/1‑133 (MQ=255)

                                                                                        gAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGaa                                                                                                     >  3:959427/1‑110 (MQ=255)

                                                                                        gAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGc                                                              <  3:953611/149‑1 (MQ=255)

                                                                                         aGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAat                                                                             <  4:1812987/133‑1 (MQ=255)

                                                                                         aGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAat                                                                             >  3:1812987/1‑133 (MQ=255)

                                                                                             ataaGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCgg                                                                                                                                           <  3:118089/67‑1 (MQ=255)

                                                                                             ataaGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTta                                                         <  1:229999/149‑1 (MQ=255)

                                                                                              taaGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTgcg                                                                                      <  3:1064648/119‑1 (MQ=255)

                                                                                              taaGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTgcg                                                                                      >  4:1064648/1‑119 (MQ=255)

                                                                                                aGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTta                                                         <  3:1682912/146‑1 (MQ=255)

                                                                                                aGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTta                                                         >  4:1682912/1‑146 (MQ=255)

                                                                                                  gCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGAc                                                    <  1:1556266/149‑1 (MQ=255)

                                                                                                    ttGATAACTCCCCCAAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGAcc                                                   >  4:855324/1‑149 (MQ=255)

                                                                                                    ttGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCa                                                  >  3:1407189/1‑149 (MQ=255)

                                                                                                         aaCTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTaa                                                                                                                           <  1:841771/71‑1 (MQ=255)

                                                                                                         aaCTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTaa                                                                                                                           >  2:841771/1‑71 (MQ=255)

                                                                                                         aaCTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAatat                                                                           <  1:848134/119‑1 (MQ=255)

                                                                                                         aaCTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAatat                                                                           >  2:848134/1‑119 (MQ=255)

                                                                                                          aCTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGaa                                                                        >  4:1706458/1‑121 (MQ=255)

                                                                                                          aCTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGaa                                                                        <  3:1706458/121‑1 (MQ=255)

                                                                                                          aCTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGgtagt                                            >  1:556932/1‑149 (MQ=255)

                                                                                                           cTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGgtagta                                           <  1:757166/149‑1 (MQ=255)

                                                                                                           cTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGgtagta                                           <  3:1050040/149‑1 (MQ=255)

                                                                                                            tCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGaa                                                                                                     >  3:364432/1‑90 (MQ=255)

                                                                                                            tCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGaa                                                                                                     <  2:1425602/90‑1 (MQ=255)

                                                                                                            tCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGaa                                                                                                     <  4:364432/90‑1 (MQ=255)

                                                                                                               ccc‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGaa                                                                        >  4:793379/1‑116 (MQ=255)

                                                                                                               ccc‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGaa                                                                        <  3:793379/116‑1 (MQ=255)

                                                                                                                          ttCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTtata                                                       >  3:487079/1‑123 (MQ=255)

                                                                                                                          ttCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTtata                                                       <  4:487079/123‑1 (MQ=255)

                                                                                                                          ttCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAgg                             <  1:926811/149‑1 (MQ=255)

                                                                                                                          ttCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAgg                             <  3:855324/149‑1 (MQ=255)

                                                                                                                                ttGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAgg                             <  1:803636/143‑1 (MQ=255)

                                                                                                                                   cAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCa                                                                                                                               >  1:491828/1‑42 (MQ=255)

                                                                                                                                   cAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCa                                                                                                                               <  2:491828/42‑1 (MQ=255)

                                                                                                                                    aGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGcga                                                                                                          >  1:178457‑M2/1‑59 (MQ=255)

                                                                                                                                    aGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGcga                                                                                                          <  2:178457‑M2/62‑4 (MQ=255)

                                                                                                                                    aGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGtt                                     >  2:918154/1‑131 (MQ=255)

                                                                                                                                    aGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGccatatg                   >  4:523337/1‑144 (MQ=255)

                                                                                                                                      aaaGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTta                                                         <  3:578112/109‑1 (MQ=255)

                                                                                                                                      aaaGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTta                                                         >  4:578112/1‑109 (MQ=255)

                                                                                                                                               aaGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGCCTGCATATGGcc             >  1:1767045/1‑144 (MQ=255)

                                                                                                                                               aaGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGCCTGCATATGGcc             <  2:1767045/144‑1 (MQ=255)

                                                                                                                                                aGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTtata                                                       >  4:139028/1‑101 (MQ=255)

                                                                                                                                                  ctcgctcatcccggtcacttactgatgtaagctcccgggaattctcgagcttgccgcctttctgcaactcgaactattttgggggagttatcaagccttattactcagcttctacgaagctttcttccgcctgggaagccagatcc        >  4:195850‑M1/1‑4 (MQ=255)

                                                                                                                                                  ctcgctcatcccggtcacttactgatgtaagctcccgggaattctcgagcttgccgcctttctgcaactcgaactattttgggggagttatcaagccttattactcagcttctacgaagctttcttccgcctgggaagccagatcc        <  3:195850‑M1/146‑143 (MQ=255)

                                                                                                                                                   tCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAggg                            >  2:819811/1‑125 (MQ=255)

                                                                                                                                                   tCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGCCTGCATATGGCCCCCttt       >  2:1043534/1‑146 (MQ=255)

                                                                                                                                                   tCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGCCTGCATATGGCCCCCttt       <  1:1043534/146‑1 (MQ=255)

                                                                                                                                                   tCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGCCTGCATATGGCCCCCTTTTTc    >  4:1862778/1‑149 (MQ=255)

                                                                                                                                                   tCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGCCTGCATATGGCCCCCTTTTTc    >  2:183172/1‑149 (MQ=255)

                                                                                                                                                     gagaATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCtt                                                          >  2:763277/1‑93 (MQ=255)

                                                                                                                                                     gagaATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCt                                                           <  4:812648/92‑1 (MQ=255)

                                                                                                                                                     gagaATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGCCTGCATATGGcccc           <  1:918106/140‑1 (MQ=255)

                                                                                                                                                     gagaATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGCCTGCATATGGCCCCCTTTTTCAc  >  3:113871/1‑149 (MQ=255)

CCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCC‑AAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGCGAAGATAACGCATCTGCGGCGCGAAATATGAAGGGGGAGAGCCCTTATAGACCAGGTAGTACACGTTTGGTTAGGGGGCCTGCATATGGCCCCCTTTTTCAC  >  NC_000913/190506‑190802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.