| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 169,749 | T→A | 10.0% | intergenic (+22/‑29) | fhuA → / → fhuC | ferrichrome outer membrane transporter/iron(3+)‑hydroxamate import ABC transporter ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 169,749 | 0 | T | A | 10.0% | 265.5 / 16.9 | 80 | intergenic (+22/‑29) | fhuA/fhuC | ferrichrome outer membrane transporter/iron(3+)‑hydroxamate import ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base T (39/33); new base A (4/4); total (43/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.35e-01 | |||||||||||
ACGTGGCGCTGCATGTTAACAACCTGTTCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGAAAGTGACC > NC_000913/169606‑169897 | aCGTGGCGCTGCATGTTAACAACCTGTTCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGt < 2:23883/149‑1 (MQ=255) gTGGCGCTGCATGTTAACAACCTGTTCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGAAATCCGTG‑c < 4:609290/149‑1 (MQ=255) caacCTGTTCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGc > 1:1184570/1‑149 (MQ=255) aacCTGTTCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTgg > 1:681935/1‑147 (MQ=255) aacCTGTTCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTgg < 2:681935/147‑1 (MQ=255) ccTGTTCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGt > 4:194072/1‑149 (MQ=255) ttCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTcc > 2:1825509/1‑121 (MQ=255) ttCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTcc < 1:1825509/121‑1 (MQ=255) ttCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATg > 1:1237548/1‑149 (MQ=255) gATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑ccc < 4:475831/124‑1 (MQ=255) gATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑ccc > 3:475831/1‑124 (MQ=255) aTCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGtt > 3:1437966/1‑142 (MQ=255) aTCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGtt < 4:1437966/142‑1 (MQ=255) tCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGAAATCCGTG‑ccc < 2:1596948/122‑1 (MQ=255) tCGTCAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGAAATCCGTG‑ccc > 1:1596948/1‑122 (MQ=255) gAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATac < 3:1602629/149‑1 (MQ=255) tCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTcc < 4:409623/105‑1 (MQ=255) tCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTcc > 3:409623/1‑105 (MQ=255) gCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTCCCGTTTTTAATTTCTTTTTTGGGGCACGG‑TTTTCGTGCCCCTTTTCAAAGTTTGGCTGTT‑TGCAAGGAAT‑CACGaaataat > 2:951440/1‑144 (MQ=255) ccAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCAtt < 3:194072/149‑1 (MQ=255) aGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTcc < 2:1184570/149‑1 (MQ=255) tttAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGtt < 1:1650860/119‑1 (MQ=255) tttAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGtt > 2:1650860/1‑119 (MQ=255) tAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑cc < 4:1846561/97‑1 (MQ=255) tAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑cc > 3:1846561/1‑97 (MQ=255) aaCACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGt < 4:1474737/93‑1 (MQ=255) aaCACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGt > 3:1474737/1‑93 (MQ=255) cacTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTa < 2:83184/115‑1 (MQ=255) cacTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTa > 1:83184/1‑115 (MQ=255) ttATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAg < 3:921449/102‑1 (MQ=255) ttATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAg > 4:921449/1‑102 (MQ=255) aTGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCAc > 3:1825811/1‑149 (MQ=255) ctgctTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCg < 2:1237548/149‑1 (MQ=255) ttCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGt < 2:1440510/78‑1 (MQ=255) ttCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGt > 1:1440510/1‑78 (MQ=255) ggggCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGa > 4:1367700/1‑123 (MQ=255) ggggCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGa < 3:1367700/123‑1 (MQ=255) ggCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTgg > 4:998188/1‑90 (MQ=255) ggCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTgg < 3:998188/90‑1 (MQ=255) gTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCggg > 2:1672108/1‑149 (MQ=255) gTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATAtctc < 1:420542/130‑1 (MQ=255) gTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATAtctc > 2:420542/1‑130 (MQ=255) aaacgcaaccTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCt < 1:951440/146‑1 (MQ=255) ccgcaaccTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCtt > 4:1870773/1‑148 (MQ=255) ccgcaaccTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCtt < 3:1870773/148‑1 (MQ=255) cTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCtttt > 2:238938/1‑143 (MQ=255) cTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCtttt < 1:238938/143‑1 (MQ=255) ttCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCg > 1:1753509/1‑149 (MQ=255) tttCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATAtct < 3:1493217/109‑1 (MQ=255) tttCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATAtct > 4:1493217/1‑109 (MQ=255) tttCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTc < 4:1825811/149‑1 (MQ=255) tCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGgc > 4:757883/1‑125 (MQ=255) tCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGgc < 3:757883/125‑1 (MQ=255) aTTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCgg < 1:1415177/119‑1 (MQ=255) aTTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCgg > 2:1415177/1‑119 (MQ=255) tttCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTaa < 2:853768/97‑1 (MQ=255) tttCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTaa > 1:853768/1‑97 (MQ=255) tctTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTc < 2:1753509/149‑1 (MQ=255) ttttGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTcc < 3:1523699/68‑1 (MQ=255) ttttGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTcc > 4:1523699/1‑68 (MQ=255) gggCACGGAAATCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCtttt < 4:347305/119‑1 (MQ=255) gggCACGGAAATCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCtttt > 3:347305/1‑119 (MQ=255) gggCACGGAAATCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTaa < 2:138153/136‑1 (MQ=255) gggCACGGAAATCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTaa > 1:138153/1‑136 (MQ=255) gCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGa > 1:1724673/1‑149 (MQ=255) gCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGa > 2:756665/1‑149 (MQ=255) gCACGGAAATCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGa > 1:1232387/1‑149 (MQ=255) cACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGcc > 4:395355/1‑144 (MQ=255) cACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGcc < 3:395355/144‑1 (MQ=255) cACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGaa > 4:581509/1‑149 (MQ=255) aCGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGaaa > 3:1070081/1‑149 (MQ=255) cGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGAAAg > 3:185711/1‑149 (MQ=255) ggATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGaa > 1:688199/1‑146 (MQ=255) ggATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGaa < 2:688199/146‑1 (MQ=255) ggATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGAAAGt > 1:1002655/1‑149 (MQ=255) ggATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGAAAGt < 2:1002655/149‑1 (MQ=255) ggATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGAAAGt > 4:1248059/1‑149 (MQ=255) gATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGc > 4:853448/1‑108 (MQ=255) gATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGc < 3:853448/108‑1 (MQ=255) gATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGAAAGTg > 3:1739674/1‑149 (MQ=255) tttCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCCGGCAGGAAAggtta < 2:721827/149‑5 (MQ=255) ttCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGAAAGTGAcc > 4:518246/1‑149 (MQ=255) | ACGTGGCGCTGCATGTTAACAACCTGTTCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAATTTCTCTTTTGGGGCACGGATTTCCGTG‑CCCATTTCACAAGTTGGCTGTTATGC‑AGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGAAAGTGACC > NC_000913/169606‑169897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |