| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,715,260 | C→T | 5.3% | A21T (GCT→ACT) ‡ | yfiE ← | putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,715,260 | 0 | C | T | 5.3% | 328.1 / 4.2 | 94 | A21T (GCT→ACT) ‡ | yfiE | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (43/46); new base T (3/2); total (46/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATAAATGTGCGGCAGCAACTTTTTTCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCATTTTTTTAAATGTTCCGTGTCGGGTACTG > NC_000913/2715114‑2715397 | aTAAATGTGCGGCAGCAACTTTTTTCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑Tc > 4:500899/1‑149 (MQ=255) aaaTGTGCGGCAGCAACTTTTTTCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGc < 1:1266170/149‑1 (MQ=255) tgCGGCAGCAACTTTTTTCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCaaaaa < 2:87697/149‑1 (MQ=255) gcagcaACTTTTTTCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGaa > 1:1154778/1‑149 (MQ=255) aaCTTTTTTCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCctc > 2:1522676/1‑149 (MQ=255) cTTTTTTCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCtt < 2:118665/149‑1 (MQ=255) ttttttCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTAGAGCATAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTc > 4:1231778/1‑149 (MQ=255) ttttttCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAAc > 4:216788/1‑142 (MQ=255) ttttttCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAAc < 3:216788/142‑1 (MQ=255) ttttttCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTc > 3:83140/1‑149 (MQ=255) ttCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACgg < 1:1522676/149‑1 (MQ=255) ttCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACgg > 3:1395702/1‑149 (MQ=255) tCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGt > 4:1889153/1‑149 (MQ=255) tAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGc > 2:516403/1‑149 (MQ=255) tAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGc < 4:83140/149‑1 (MQ=255) tAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGc < 4:1162177/149‑1 (MQ=255) tCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATaaaa < 3:1157338/149‑1 (MQ=255) gTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACgg < 3:500899/149‑1 (MQ=255) ccAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGgc > 3:699365/1‑145 (MQ=255) ccAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGgc < 4:699365/145‑1 (MQ=255) ccAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAg > 3:1364915/1‑149 (MQ=255) cAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGaa > 4:358962/1‑107 (MQ=255) cAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGaa < 3:358962/107‑1 (MQ=255) cAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGaa > 4:28179/1‑107 (MQ=255) cAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGaa < 3:28179/107‑1 (MQ=255) cAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGa > 2:595038/1‑149 (MQ=255) aaTTTTCTCAAATAACTGGACTGAAAACTCCTGCTCATGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACGCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGAt < 3:1231778/149‑1 (MQ=255) aaTTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGAt < 2:1154778/149‑1 (MQ=255) aTTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATc < 4:1364915/149‑1 (MQ=255) ttttCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATcc < 1:516403/149‑1 (MQ=255) ttttCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATcc < 4:1395702/149‑1 (MQ=255) tttCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATaaaa > 1:81131/1‑136 (MQ=255) tttCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATaaaa < 2:81131/136‑1 (MQ=255) ctcAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATaa < 1:595038/149‑1 (MQ=255) aaaTAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATc < 1:1850983/141‑1 (MQ=255) aaaTAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATc > 2:1850983/1‑141 (MQ=255) aaaTAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAAccc > 1:887059/1‑149 (MQ=255) tGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCGCAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCt > 1:1247359/1‑149 (MQ=255) tGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCt > 1:1776446/1‑149 (MQ=255) tGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGCTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAAc > 1:1272915/1‑147 (MQ=255) tGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCCCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAAc < 2:1272915/147‑1 (MQ=255) aCTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAACAAAACGGCGCAGATCCATAACCCCAAACCTATc > 1:1246897/1‑149 (MQ=255) tGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAAc < 2:13429/86‑1 (MQ=255) tGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAAc > 1:13429/1‑86 (MQ=255) tGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGtaa > 1:594832/1‑113 (MQ=255) tGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGtaa < 2:594832/113‑1 (MQ=255) tGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATcc > 3:1109539/1‑130 (MQ=255) tGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATcc < 4:1109539/130‑1 (MQ=255) gAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTaa < 2:1300810/106‑1 (MQ=255) gAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTaa > 1:1300810/1‑106 (MQ=255) aaaCTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCGCAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGaaaa < 2:1247359/149‑1 (MQ=255) aaCTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAat > 3:1638396/1‑149 (MQ=255) tCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATc < 4:1565054/149‑1 (MQ=255) tCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATc > 3:1565054/1‑149 (MQ=255) tGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAAcc < 3:1478972/77‑1 (MQ=255) tGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAAcc > 4:1478972/1‑77 (MQ=255) gctgctGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGaa < 3:1889153/149‑1 (MQ=255) gctgctGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAACAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGaa < 2:1246897/149‑1 (MQ=255) tgctgAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAata > 3:1780642/1‑149 (MQ=255) gctgAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTaa < 2:1327848/87‑1 (MQ=255) gctgAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTaa > 1:1327848/1‑87 (MQ=255) ctgAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATc < 1:1854712/135‑1 (MQ=255) ctgAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATc > 2:1854712/1‑135 (MQ=255) gAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATc < 2:1536868/124‑1 (MQ=255) gAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATaaa > 3:226263/1‑149 (MQ=255) gAATATGAAAAGTCACCGTCGATTGTGTACAGCACAACTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCGAAACCTATc > 1:1536868/1‑124 (MQ=255) aaTATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTaa < 2:1151429/83‑1 (MQ=255) aaTATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTaa > 1:1151429/1‑83 (MQ=255) tGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAGCT‑TCGCaaaaat > 2:506780/1‑53 (MQ=25) tGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAGCT‑TCGCaaaaat < 1:506780/54‑2 (MQ=25) gAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAGCT‑TCGCaaaaatt > 1:236404/1‑52 (MQ=25) gAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAGCT‑TCGCaaaaatt < 2:236404/54‑3 (MQ=25) gAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTa > 3:853951/1‑134 (MQ=255) gAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTa < 4:853951/134‑1 (MQ=255) gTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTccacca > 3:255009/1‑64 (MQ=255) gTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTccacca < 4:255009/64‑1 (MQ=255) aCCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCAtttttt < 4:1780642/149‑1 (MQ=255) gTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCg > 3:1553999/1‑70 (MQ=255) gTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCg < 4:1553999/70‑1 (MQ=255) gtgtACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCATTTTTTTAAATGTTcc < 4:1638396/149‑1 (MQ=255) aGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCATTTTTTTAAATGTTCCGTGTCg > 3:1208628/1‑149 (MQ=255) gCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCATTTTTTTAAATGTTCCGTGTCgg < 2:1776446/149‑1 (MQ=255) tttttGCGAGCT‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCATTTTTTTAAATGTTCCGTGTCGGGTACTg > 3:315186/1‑149 (MQ=255) tttttGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCAttttt < 2:1375995/125‑1 (MQ=255) tttttGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCAttttt < 2:1807078/125‑1 (MQ=255) tttttGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCAttttt > 1:1807078/1‑125 (MQ=255) tttttGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCAttttt > 1:1375995/1‑125 (MQ=255) tttttGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCATTTTTTTAAATGTTCCGTGTCGGGTACTg < 4:226263/149‑1 (MQ=255) ttttGCG‑AGCTTCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGaa < 2:1706514/105‑1 (MQ=255) ttttGCG‑AGCTTCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGaa > 1:1706514/1‑105 (MQ=255) tttGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATaaaaa < 2:300672/112‑1 (MQ=255) tttGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATaaaaa > 1:300672/1‑112 (MQ=255) gAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAg < 2:1801561/97‑1 (MQ=255) gAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAg > 1:1801561/1‑97 (MQ=255) | ATAAATGTGCGGCAGCAACTTTTTTCCTTCGCGGGTAAGGCACATCCGTCGGCCAATTTTCTCAAATAACTGGACTGAAAACTCCTGCTCAAGCTGCTGAATATGAAAAGTCACCGTCGATTGTGTACAGCACAATTTTTGCGAAGC‑TCGCAAAAAGGAACCCTCTTCCACCACGGTTTTAAGCGTAATAAAACGGCGCAGATCCATAACCCCAAACCTATCGAAAATATCGAATCTAGAATATAAAAACATTCATTTTTTTAAATGTTCCGTGTCGGGTACTG > NC_000913/2715114‑2715397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |