| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,736,325 | A→C | 6.5% | intergenic (+168/+28) | xylR → / ← bax | xylose divergent operon transcriptional activator/putative glucosaminidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,736,325 | 0 | A | C | 6.5% | 822.6 / 40.3 | 237 | intergenic (+168/+28) | xylR/bax | xylose divergent operon transcriptional activator/putative glucosaminidase |
| Reads supporting (aligned to +/- strand): ref base A (117/97); new base C (8/7); total (128/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.38e-01 | |||||||||||
Only 100 of 249 total aligned reads displayed.
GTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCACT > NC_000913/3736178‑3736473 | gTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACaa < 4:1399566/149‑1 (MQ=255) tCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAg > 4:1034355/1‑149 (MQ=255) caTCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTc < 2:1413602/148‑1 (MQ=255) caTCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTc > 1:1413602/1‑148 (MQ=255) caTCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTc < 1:1463697/148‑1 (MQ=255) aTCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGt < 1:514427/146‑1 (MQ=255) tCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGa < 2:1341497/149‑1 (MQ=255) tCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGa < 1:1710632/149‑1 (MQ=255) gTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTc > 2:831036/1‑129 (MQ=255) tcggataaggcgttcacgccgcatccgACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAAt > 2:891611‑M1/28‑149 (MQ=255) ataaggcgttcacgccgcatccgACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAg < 4:1799334‑M1/96‑1 (MQ=255) ataaggcgttcacgccgcatccgACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAg > 3:1799334‑M1/24‑119 (MQ=255) ataaggcgttcacgccgcatccgACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATaa > 3:521297‑M1/24‑127 (MQ=255) ataaggcgttcacgccgcatccgACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATaa < 4:521297‑M1/104‑1 (MQ=255) aaCGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TTGTCAGTCGGATaa < 3:131651/117‑1 (MQ=255) aaCGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAAt > 2:1654971/1‑135 (MQ=255) aaCGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAAt < 1:1654971/135‑1 (MQ=255) gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCaa < 1:271674/131‑1 (MQ=255) ccgACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGt > 4:622426‑M1/4‑149 (MQ=255) cgACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGtt < 2:1538696‑M1/147‑1 (MQ=255) gACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACaa > 2:402438‑M1/2‑96 (MQ=255) gACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACaa < 1:402438‑M1/95‑1 (MQ=255) gACCTACCCGCCAGGCATGATAAAACGCACCAAAAACGCTTCAAGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCg < 4:89525‑M1/99‑1 (MQ=255) tACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTa > 4:725887/1‑149 (MQ=255) ccGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCACGATTAACCGTTGGTTATcc > 1:1616536/1‑149 (MQ=255) cGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGt > 2:279030/1‑90 (MQ=255) gCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTc < 2:1404206/85‑1 (MQ=255) gCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTg < 2:438476/144‑1 (MQ=255) gATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACaa > 4:193216/1‑78 (MQ=255) gATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACaa < 3:193216/78‑1 (MQ=255) aaaCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGc < 1:65489/86‑1 (MQ=255) gCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACaa < 1:764886/70‑1 (MQ=255) gCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACaa > 2:764886/1‑70 (MQ=255) aCCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATcc > 2:559907/1‑128 (MQ=255) caacaaCGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCgg < 3:1592957/71‑1 (MQ=255) caacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgttgtt < 3:725887/149‑1 (MQ=255) aacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCg < 2:1203859/66‑1 (MQ=255) gCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTAGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATaa < 1:1538696/149‑1 (MQ=255) cTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAAc < 2:1695324/149‑1 (MQ=255) ttCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTg < 2:586279/110‑1 (MQ=255) ggCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGtt > 2:378590/1‑105 (MQ=255) ggCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGtt < 1:378590/105‑1 (MQ=255) gCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTcc > 3:312983/1‑149 (MQ=255) gTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATaa > 3:933530/1‑57 (MQ=255) gTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAAt > 2:1601684/1‑75 (MQ=255) gTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAAt > 3:1108494/1‑75 (MQ=255) tCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTcc < 2:1044176/140‑1 (MQ=255) aaCTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAActct < 1:133683/135‑1 (MQ=255) aaCTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCttt < 1:1221687/142‑1 (MQ=255) gagaCAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGc < 4:30875/104‑1 (MQ=255) gaCAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGt > 1:1548281/1‑95 (MQ=255) gaCAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTAc > 4:924794/1‑97 (MQ=255) gaCAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTAc < 3:924794/97‑1 (MQ=255) gaCAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACAt > 4:178284/1‑99 (MQ=255) gaCAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACAt < 3:178284/99‑1 (MQ=255) gaCAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACa < 4:1256899/107‑1 (MQ=255) aaaGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTcc > 3:1738962/1‑125 (MQ=255) tAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACat < 4:83103/56‑1 (MQ=255) tAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTcc < 2:1032653/121‑1 (MQ=255) aaaaGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTg > 1:524688/1‑84 (MQ=255) aaaaGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTg > 2:720012/1‑124 (MQ=255) cTTATCCGACTTGTC‑AGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAg < 4:661591/97‑1 (MQ=38) cTTATCCGAC‑TTGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTgg > 2:1128531/1‑70 (MQ=25) cTTATCCGAC‑TTGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGcc > 1:1074796/1‑129 (MQ=255) cTTATCCGAC‑TTGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCg > 3:429233/1‑149 (MQ=255) cTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTta > 1:1037819/1‑103 (MQ=255) cTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCg > 3:596742/1‑149 (MQ=255) cTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTCTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCg > 4:1247501/1‑149 (MQ=255) ttATCCGACTTGTC‑AGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCt > 1:622498/1‑136 (MQ=255) ttATCCGAC‑TTGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCt < 1:178555/136‑1 (MQ=255) ttATCCGAC‑TTGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCt > 2:178555/1‑136 (MQ=255) ttATCCGAC‑TTGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGc < 4:429233/149‑1 (MQ=255) ttATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTg < 2:1465206/117‑1 (MQ=255) tATCCGAC‑TTGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTtg < 4:1688193/137‑1 (MQ=255) aTCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGa > 3:280464/1‑139 (MQ=255) tCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATaa < 3:1242186/102‑1 (MQ=255) tCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCtt > 3:66035/1‑134 (MQ=255) tCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCtt < 2:939264/134‑1 (MQ=255) tCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCtgt > 2:70360/1‑149 (MQ=255) tCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCtgt > 3:1543737/1‑149 (MQ=255) tCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCt < 3:1026306/147‑1 (MQ=255) cGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAgg < 1:250749/88‑1 (MQ=255) cGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTgg > 1:1000407/1‑149 (MQ=255) cGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTgg > 1:1362976/1‑149 (MQ=255) gAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATc < 1:9014/68‑1 (MQ=255) gAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCtt > 2:806939/1‑109 (MQ=255) gAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCtt < 1:806939/109‑1 (MQ=255) gAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCt < 2:207343/130‑1 (MQ=255) aC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCa > 3:685675/1‑149 (MQ=255) tGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGt > 4:274419/1‑149 (MQ=255) tGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGt > 3:856274/1‑149 (MQ=255) tGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGt > 3:903343/1‑149 (MQ=255) aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTg < 2:1287322/66‑1 (MQ=255) aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTCTAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCtt > 4:1625830/1‑126 (MQ=255) aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTtgtg < 4:1351804/129‑1 (MQ=255) aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCa > 1:876582/1‑149 (MQ=255) aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCa > 4:177082/1‑149 (MQ=255) aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCa > 2:1566028/1‑149 (MQ=255) aaGTCGGATAAGGCTCTAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatcat < 4:1137405/133‑1 (MQ=255) aaGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATCAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCACt > 1:1201534/1‑149 (MQ=255) | GTCACATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCACT > NC_000913/3736178‑3736473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |