New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 323130889 (0.900)5 (0.050) 5/310 NT 5.9% noncoding (57/283 nt) REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 = 3231327 75 (0.790)noncoding (76/283 nt) REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences

TTATCGTGATGATGCCCTGAAGCTGGCGGATACGTTCTTCCGGCACGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTT  >  NC_000913/3231056‑3231590
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                        
ttATCGGGATGATGCCCTGAAGCTGGCGGATACGTTCTTCCGGAACGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCat                                                                                                                                                                                                                                                                        >  1:68664‑M2/1‑272 (MQ=255)
        atgatgCCCTGAAGCTGGCGGATACGTTCTTCCGGCACGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACt                                                                                                                                                                                                                                                               >  2:138021/1‑275 (MQ=255)
           atgCCCTGAAGCTGGCGGATACGTTCTTCCGGCACGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCTCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCa                                                                                                                                                                                                                                                            >  2:47779/1‑275 (MQ=255)
                        ggCGGATACGTTCTTCCGGCACGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTAAATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCAGCCGGCAACTGCAccagcccaccgg                                                                                                                                                                                                                                                >  4:264552/1‑264 (MQ=255)
                                     ttcCGGCACGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTg                                                                                                                                                                                                                                   <  2:264556/274‑1 (MQ=255)
                                     ttcCGGCACGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTAGATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTg                                                                                                                                                                                                                                   <  2:310864/274‑1 (MQ=255)
                                     ttcCGGAACGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGAACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAGTCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTg                                                                                                                                                                                                                                   <  2:506261/274‑1 (MQ=255)
                                             cGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGCTGCGGCGTAAACGCCTTATCCGCCCTACATTTTCAATCCTCC‑TTGCCGGATAAAACGCGGCAAGCAGTGCATCCAGCAACTGCACCGCGCCACTGGCGGATGCCGGGGTACCGCCTTa                                                                                                                                                                                                                          >  4:314667/1‑275 (MQ=39)
                                                 aaaGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGGAAAGCAAGGCGAACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCg                                                                                                                                                                                                                      <  2:423522/275‑1 (MQ=255)
                                                  aaGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGc                                                                                                                                                                                                                     <  2:332598/275‑1 (MQ=255)
                                                   aGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGcc                                                                                                                                                                                                                    <  2:314671/275‑1 (MQ=255)
                                                                        agaacgggAAAATTACAAACCGCGGACCGGCGGACAGCAAGGCGAACTAAATTTCGCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACGGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAgg                                                                                                                                                                                               <  4:147831/269‑1 (MQ=25)
                                                                                    ttACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGAcg                                                                                                                                                                                   >  2:181916/1‑275 (MQ=255)
                                                                                         aCCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGCTGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCg                                                                                                                                                                                                   >  2:147832/1‑254 (MQ=255)
                                                                                              cTGACAGGCGAACAGCAAGGCGCACCAAATTTCTCCTGGGATGCCGCGCAGTTGTATATGTTGTATAACGAATTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGt                                                                                                                                                                         <  4:181914/275‑1 (MQ=255)
                                                                                               tGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGt                                                                                                                                                                         <  2:115905/274‑1 (MQ=255)
                                                                                                        cacaGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAACCGCGGCAAGCGTTTCATCCGGCAACTGCACCGCGCCACTGGCCGATGCGGCGTGAACGCCTTACCCGCCCTACCTGTGTTTCCCCGTGGGTCCGATAAGACGCCACAAGCGTCC‑CCTCCgg                                                                                                                                                               >  4:63155/1‑274 (MQ=37)
                                                                                                                    cACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCAc                                                                                                                                                      <  1:70858/271‑1 (MQ=255)
                                                                                                                                ccTGGAGGCCCGCGCATTGGTAAAGGTTGAATAACGATTTTTTCCGTAAGCAAAATTTTCAAACTGTGGGCGGAGGCGGCGAAAACGCTTTATCCGCCCTAC‑TGTGGAAACCCCCTTGGCCGAAT‑AAACGCGGCAAGCGTTGCATCCgg                                                                                                                                                                                                                                                                    <  7:82184/149‑1 (MQ=255)
                                                                                                                                   tgcgggCCGAGCCTTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGACCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCAACGCGCCACTGACGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATgcg                                                                                                                                   <  2:304081/270‑1 (MQ=255)
                                                                                                                                         ccGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCa                                                                                                                                                                                                                                                            >  5:335356/1‑149 (MQ=255)
                                                                                                                                         ccGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCCGATGCGGCGTGAACGCCTTCACCCCCCTACATCTGGGTTTCCCTAGGTCGGAGAACACGCGAAAAGCCCCC‑CACTCGGCATACGCACCGCGCCACCCGCGGACgcgtcgcg                                                                                                                              >  4:83312/1‑272 (MQ=21)
                                                                                                                                                tttGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGcc                                                                                                                                                                                                                                                     >  8:171194/1‑149 (MQ=255)
                                                                                                                                                     atatGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTgg                                                                                                                                                                                                                                                >  8:277730/1‑149 (MQ=255)
                                                                                                                                                         gttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCNGCGTGAACGCCTTATCCGCCCTACATTGATGTTCCCGGAGTTCGGATANNAcg                                                                                                                                                                                   >  4:512784/1‑206 (MQ=255)
                                                                                                                                                         gttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGtt                                                                                                                                                                                                       >  2:349486/1‑186 (MQ=255)
                                                                                                                                                           tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCCCCGCGCCACTGGCGGATgcgg                                                                                                                                                                                                                                       >  4:423703/1‑152 (MQ=255)
                                                                                                                                                           tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑c                                                                                                                                                                     >  2:241301/1‑217 (MQ=255)
                                                                                                                                                           tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCt                                                                                                             <  2:44350/273‑1 (MQ=255)
                                                                                                                                                           tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCCCCACTGGCCGAAGCGGAGTGGACCCCTTACCCACCCttc                                                                                                           >  2:466061/1‑273 (MQ=255)
                                                                                                                                                           tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCCCCCATGGCCGATGCGGCGTTACCGCCTTATCCGCCCTACATGTGCGTTCCCGTCGGTCGGATAAGACGCGACAAGCGTCGCCATCC‑GCATTCTCACCGCGACACCGTCCGGTGCGGCGGGGAAGccctctaccccccc                                                                                                            >  4:44350/1‑262 (MQ=18)
                                                                                                                                                             tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCTCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCg                                                                                                                                                                                                   <  4:349481/186‑1 (MQ=255)
                                                                                                                                                             tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATTCGGCATCTGCAACGCGCCACTGGCGGATGCGGCCGGGCCCACTTATCCGCCCTACa                                                                                                          >  1:123910/1‑274 (MQ=255)
                                                                                                                                                             tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAACCGTCG‑CATCCGTCATCTGCACCGCGCCACTGGCCGATGCGACGTGGACGCCTTATCCGCCCTACa                                                                                                          >  2:156409/1‑274 (MQ=255)
                                                                                                                                                              ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTg                                                                                                                              >  2:267574/1‑253 (MQ=255)
                                                                                                                                                               taACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTg                                                                                                                                                                                                                                   <  2:423708/152‑1 (MQ=255)
                                                                                                                                                               taACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATcc                                                                                                                                                                 <  4:241297/217‑1 (MQ=255)
                                                                                                                                                                 aCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGt                                                                                                                                                                                                                                    >  8:458011/1‑149 (MQ=255)
                                                                                                                                                                  cGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACg                                                                                                                          <  4:267570/253‑1 (MQ=255)
                                                                                                                                                                  cGATTTTGTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCa                                                                                                    <  2:83313/275‑1 (MQ=255)
                                                                                                                                                                   gATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGa                                                                                                                                                                                                                                  >  7:414114/1‑149 (MQ=255)
                                                                                                                                                                   gATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCaa                                                                                                   <  2:512789/275‑1 (MQ=255)
                                                                                                                                                                   gATTTTTTCCGTAAGCAATAATTTGCAAATGCTGGCGGATGCGGCTGAAACGCCTTTTCCGGCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGAAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCaa                                                                                                   <  2:489239/275‑1 (MQ=255)
                                                                                                                                                                         ttCCGTAAGCAAGAATTGGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATTCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGt                                                                                             <  2:106646/275‑1 (MQ=255)
                                                                                                                                                                           ccGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTa                                                                                                                                                                                                                          >  8:238213/1‑149 (MQ=255)
                                                                                                                                                                            cGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAAc                                                                                          <  2:448792/275‑1 (MQ=255)
                                                                                                                                                                                 gCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGcc                                                                                                                                                                                                                    <  7:171194/149‑1 (MQ=255)
                                                                                                                                                                                        tttGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtg                                                                                                                                                                                                             <  7:458011/149‑1 (MQ=255)
                                                                                                                                                                                         ttGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtgt                                                                                                                                                                                                            <  6:18133/149‑1 (MQ=255)
                                                                                                                                                                                          tgaaactcatgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAAcgcg                                                                            <  2:4186/266‑1 (MQ=255)
                                                                                                                                                                                           gCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtgtgt                                                                                                                                                                                                          <  6:217602/149‑1 (MQ=255)
                                                                                                                                                                                             aaCTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATgtgtgt                                                                                                                                                                                                        >  6:78524/1‑149 (MQ=255)
                                                                                                                                                                                                    ggCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTTGATAAAACCCGACAAGCGTc                                                                   >  2:416378/1‑274 (MQ=255)
                                                                                                                                                                                                              gcgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATaa                                                                                                                                                                                       <  7:277730/149‑1 (MQ=255)
                                                                                                                                                                                                               cgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGc                                                                                                                                                                                                                                                                          >  2:445774/1‑65 (MQ=255)
                                                                                                                                                                                                               cgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAg                                                                                                                                                                                      <  5:78524/149‑1 (MQ=255)
                                                                                                                                                                                                                   aaCGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGAcgc                                                                                                                                                                                  <  6:335356/149‑1 (MQ=255)
                                                                                                                                                                                                                        cTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtgtgt                                                                                                                                                                                                          <  7:387863/120‑1 (MQ=255)
                                                                                                                                                                                                                        cTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtgtgt                                                                                                                                                                                                          >  8:387863/1‑120 (MQ=255)
                                                                                                                                                                                                                        cTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACaa                                                                                                                                                                             <  6:90026/149‑1 (MQ=255)
                                                                                                                                                                                                                        cTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACaa                                                                                                                                                                             <  7:238213/149‑1 (MQ=255)
                                                                                                                                                                                                                         ttATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAg                                                                                                                                                                            >  8:436766/1‑149 (MQ=255)
                                                                                                                                                                                                                                cccTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACGAGACAAGCGTCGCCTCCGGCGTTACCACCGGGCGTATTc                                       >  2:369946/1‑274 (MQ=255)
                                                                                                                                                                                                                                  cTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATc                                                                                                                                                                  <  7:436766/149‑1 (MQ=255)
                                                                                                                                                                                                                                      aTGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAAc                                                                                          <  2:490235/217‑1 (MQ=255)
                                                                                                                                                                                                                                         tgCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAt                                                                                                                                                                                                              <  5:474594/99‑1 (MQ=255)
                                                                                                                                                                                                                                         tgCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAt                                                                                                                                                                                                              >  6:474594/1‑99 (MQ=255)
                                                                                                                                                                                                                                            aaTCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGc                                                                                                                                                        >  6:129523/1‑149 (MQ=255)
                                                                                                                                                                                                                                             aTCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCt                                                                                                                       >  4:469485/1‑181 (MQ=255)
                                                                                                                                                                                                                                             aTCCCCC‑TGGCCGGAAAAACGGCGGCAGCCGTTGCAGCCGGCAAACGCACCGCACAACTGGCGCATGCGGGGTTAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCTGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCAt                         <  4:369941/275‑1 (MQ=255)
                                                                                                                                                                                                                                               cctcc‑tGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCAcc                                                                                                                                                     >  7:184035/1‑149 (MQ=255)
                                                                                                                                                                                                                                                ctcc‑tGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGt                                                                                                                                                                         <  6:12305/129‑1 (MQ=255)
                                                                                                                                                                                                                                                ctcc‑tGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGt                                                                                                                                                                         >  5:12305/1‑129 (MQ=255)
                                                                                                                                                                                                                                                 tcc‑tGGCCGGATAAAACGCGGCAAGCGTTGCatccggccaggaggattgcacatgtagggcggataaggcgtttac                                                                                                                                                                                                                             <  7:434426‑M2/76‑46 (MQ=255)
                                                                                                                                                                                                                                                 tcc‑tGGCCGGATAAAACGCGGCAAGCGTTGCatccggccaggaggattgcacatgtagggcggataaggcgtttac                                                                                                                                                                                                                             >  8:434426‑M2/1‑31 (MQ=255)
                                                                                                                                                                                                                                                 tcc‑tGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATc                                                                                                                   <  2:469490/181‑1 (MQ=255)
                                                                                                                                                                                                                                                      ggCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCa                                                                                                                                               <  5:129523/149‑1 (MQ=255)
                                                                                                                                                                                                                                                           gATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGc                                                                                                                                          <  8:414114/149‑1 (MQ=255)
                                                                                                                                                                                                                                                           gATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCa            <  2:63156/275‑1 (MQ=255)
                                                                                                                                                                                                                                                            aTAAAACGCGGCAAGCGTTGCatccggccaggaggattgcacatgtagggcggataaggcgtttacgccgcatccgc                                                                                                                                                                                                                  <  6:428468‑M2/77‑57 (MQ=255)
                                                                                                                                                                                                                                                            aTAAAACGCGGCAAGCGTTGCatccggccaggaggattgcacatgtagggcggataaggcgtttacgccgcatccgc                                                                                                                                                                                                                  >  5:428468‑M2/1‑21 (MQ=255)
                                                                                                                                                                                                                                                            aTAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGGTGCGGCGTGGACGc                                                                                                                         >  1:136115/1‑165 (MQ=255)
                                                                                                                                                                                                                                                             tAAAACGCGGCAAGCGTTGCatccggcaaggaggattgcacatgtagggcggataaggcgtttacgccgcatccgccagcagttgcaaattattgcttacggaaaaaatcgttatacaacatatacaaatgcgcggcactccaggagaa                                                                                                                                         <  5:76001‑M2/149‑130 (MQ=255)
                                                                                                                                                                                                                                                                      gCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTTCAATTCCGTAACCTGGATAAAACGCGACAAGCCTCGCCTCCGGCGTTAGCCCCCGGGGTATTCTTTTTGAATCCCACCCCAAACCCCGCCCCCccctttt  >  4:424325/1‑274 (MQ=37)
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                        
TTATCGTGATGATGCCCTGAAGCTGGCGGATACGTTCTTCCGGCACGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCC‑TGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCG‑CATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACGCGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTT  >  NC_000913/3231056‑3231590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.