| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,902,495 | A→C | 6.3% | G200G (GGA→GGC) ‡ | ygcE → | putative kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,902,495 | 0 | A | C | 6.3% | 312.8 / 12.8 | 97 | G200G (GGA→GGC) ‡ | ygcE | putative kinase |
| Reads supporting (aligned to +/- strand): ref base A (44/45); new base C (3/3); total (48/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.86e-02 | |||||||||||
Only 100 of 102 total aligned reads displayed.
TACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGAAGGTTACGGTATTCGCAAAGGCATGTGGACGGTGAGCTGGCTGCGCGACATGCTAGGCGA > NC_000913/2902229‑2902743 | tACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATTCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACAGTCCTCGGACATATCACACCACAAGCCGCACTGCCGACACATTTCCCGGCAGGACTGCCgg > 2:49129/1‑274 (MQ=255) acacTAACCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACCCATTTCCCGGCAGGACTGCCGGttgtttgt > 2:62684/1‑275 (MQ=255) gTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGTTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGGTGCGGTAATGNATAAGTTTAATATCCCACGTCATATGCTGTTTGATGTGCACATGAACTGAAACTTCCTAGTAGATATCACACCANAAGCCGCACAGGAGACACAATTCCCGCCACNNCGGCGCGTTGTTTGTCGCACCCGTGACaa > 3:63193/1‑275 (MQ=255) ggCATTTGTAACCTCTTTTTAGGGTTTTCTGACGCATCGCTTAACCGGAGAGTTTAAAGACAATAGCGCCAACAATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATaaa < 4:442409/274‑1 (MQ=255) cATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGa > 2:442414/1‑268 (MQ=255) tCACCTCTTTTCCGGGTTATCTGACGAATCGGTTAAACGGCGAGTTTTAAGAAAATCTCTCCAACTATTTTGGTCAGTGTCCTGTGGATTAGAAGGGCTGGGCATGGAGTGAGGATGCTGCGGTACTGGATAAGTTTAATAGCCCCCGTCATATGCTGTTTGCTGTGCAAATGCCTGGCACCGTCCTCGGACACATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGaa < 4:352399/275‑1 (MQ=255) ttCGGGTTTACTAAGGAATGGCTTACCCGGGGGGTTTAAAGAAGAAATTGCAAAATAGTTAGGTCAGGGGTCGTTGGATTATAAGGGCTGGGCATGGAGCGACGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTGGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCCCACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTggggg < 4:62683/275‑1 (MQ=255) gACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTgg < 2:81473/275‑1 (MQ=255) aCAATATCGCAAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGc < 2:34376/275‑1 (MQ=255) ccAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGAAAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCAACGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGGTTGTCACACCAGGGCTAAACCGGTAGAAGGCCTGGGGGCGGGCGTTAC‑GGAACGTGAAAAGGCTGTTATTTTCCTTGGCCCTTaaca > 4:405902/1‑271 (MQ=255) aCTATGTTGGTCAGTGGCCGGTGGATTATAACAGCTGGGCATGGAGCGAAGTTGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTTTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCa < 1:63193/275‑1 (MQ=255) aTTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGa > 8:143214/1‑149 (MQ=255) aTTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTg > 2:264878/1‑275 (MQ=255) agagCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCAACACATTTCCCGGCAGGAccgccg < 5:404421/149‑1 (MQ=255) gagCTGGGCATGGAGCGAAGATGCTGCGGTAATGGGTAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATAACACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGTCCTGCCgg < 7:324933/149‑1 (MQ=255) gCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGctc > 2:488623/1‑183 (MQ=255) gCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGCTGATGAAACGGCGGTAATTTCGCTTGGCACTTACATCGCATTTAGGATGAACGCCAAAGCCCTCCCgcatgac > 4:386767/1‑269 (MQ=255) tGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACTTTTCCCGGCAGTCCTGCCgtgaaa < 5:404764/149‑6 (MQ=255) ggCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATGGCCCGTCATGTGCTGTTTGCTGTGAAAAAGCCTGTTAACGTTCTCGGACATATCACACCACATGCCGCACTGGCGACAACATTCCCGGCAGGTCTGCCgcctcttt > 8:67745/1‑142 (MQ=255) ggCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGttgttt < 5:81972/149‑1 (MQ=255) ggCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTggg < 4:488618/183‑1 (MQ=255) cGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTAccacca < 7:67745/149‑1 (MQ=255) aGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTg < 6:276141/149‑1 (MQ=255) ctgcGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGTCACCGTCCTCGGACATACCACACCCCAAGCCCCACTGGCGACACCTTTCCCGGCAGCACTGCCGGTTGCCTGTACCACCAGTGATCAACCGGTAGAAGCCCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTGCTCTTGGTACTTACATCGAATTGATGATGAACGGCCAAGCACTGCCGAAAAATCCAGTAG‑CGTACTGCCAGAtt > 4:139857/1‑275 (MQ=255) cGGTAATGGATAAGTTTAATATCCCCCGTCATATGATGTTTGATGTGCAAATGCATGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCTCGGCAGTACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTAt < 1:96042/274‑1 (MQ=255) gATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGc > 5:341095/1‑149 (MQ=255) aaGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGctct < 7:143214/149‑1 (MQ=255) gTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTgg > 6:137463/1‑149 (MQ=255) gTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTgg < 7:430232/149‑1 (MQ=255) gTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGaaa > 1:144114/1‑235 (MQ=255) gTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTCTTCTATTCCGc < 2:139858/275‑1 (MQ=255) tttAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGa < 6:437844/102‑1 (MQ=255) tttAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTggg > 7:27255/1‑149 (MQ=255) atatCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCAGTAGAAGCTCTGGGGGcc > 5:466113/1‑149 (MQ=255) atagCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACCCCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTCTTCTATTCCGCAAACa < 2:405907/275‑1 (MQ=255) cccGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTAACACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGCTGATGAAACGGCGGTAATTTCTCTTGGCCATTACATCGCCATAGTGGTTAACGACAAAGCACTCCCGAAAGATCTGATCT‑CCAACGGGCAGATTACTGCTTCTATTCCGCAAACATTTCTg > 4:311309/1‑275 (MQ=255) gTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGaa < 2:145494/220‑1 (MQ=255) tCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTgg > 6:388783/1‑149 (MQ=255) tCATATGCTGTTTGATGTGCAAATGCCTGGCAACGTCCTCGGACATATCACACCCCAAGCCGCACTGGCGACAAATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGGAATTTCTCTTGGAACTTACAACTCATGGATGATGACGGGCAAAGCAATGCCGAACGAACCAGTAGACGCA‑GGGACGGTTCTGGCTAAGTTTCCGCAAACATTGCTGTATg > 4:170648/1‑275 (MQ=255) tCATATGCTGTTGGATGTGCAAATGCCTNACACCGTCCTCGGACATACCACCACNAAAGGCGAACCTGCGACAAATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGNGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTAt < 3:90406/274‑1 (MQ=255) tGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGgatgat < 8:34478/149‑1 (MQ=255) tttGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAATGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTTTTCTATTCCGCCAACATTGCTGTTGTAAGGTTAAgg > 2:53201/1‑275 (MQ=255) tttGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCt > 1:90406/1‑260 (MQ=255) tttGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGACGGTTACgg > 2:223066/1‑275 (MQ=255) ggATGTGACAATGCCTGGCACCGCACTCGGACATATCACAACACAAGCCGCACTGGAGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGAAGGTTACGGt < 4:290804/273‑1 (MQ=255) gATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAAcggc < 5:388783/149‑1 (MQ=255) aaTGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAAttt > 8:249099/1‑149 (MQ=255) aTGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTtc < 5:426791/149‑1 (MQ=255) gCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTtctc > 8:338459/1‑149 (MQ=255) gCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTtctc > 5:126969/1‑149 (MQ=255) gCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGAAGGTTACGGTATTCGCAAAGGct > 2:290808/1‑274 (MQ=255) tGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTg < 6:466113/149‑1 (MQ=255) ggCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTgg < 7:124879/149‑1 (MQ=255) gCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGc < 8:11720/149‑1 (MQ=255) gCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGc > 4:458770/1‑186 (MQ=255) ccGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACt < 5:105963/149‑1 (MQ=255) ccGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACt < 6:126969/149‑1 (MQ=255) cGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGaa < 2:458775/186‑1 (MQ=255) gTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTg > 7:172295/1‑114 (MQ=255) gTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTg < 8:172295/114‑1 (MQ=255) tCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTAc > 6:110524/1‑149 (MQ=255) tCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGAt < 6:171611/77‑1 (MQ=255) tCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGAt > 5:171611/1‑77 (MQ=255) tCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATc > 6:328598/1‑149 (MQ=255) tCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATc > 8:274374/1‑149 (MQ=255) tatCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGCTAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGGAATTTCTCTTGGCACTTACATCGCATTGATGATGAAAGGCAAAGCACTGCTGAAAGATCCAGTAG‑CGTCCTGGCCGATTATGTATTCTATTGCCAAATCATTGCTGGTGTAATGTTACGGAATTACCCATGGACTGCGGACGGGGAgcgggccgg > 4:138005/1‑272 (MQ=255) atCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATtgat > 6:412904/1‑149 (MQ=255) ccccacAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGTGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGAAGGTTACGGTATTCGCAAAGGCATGTGGACGGTGAGCTGGCTgcgc < 2:218111/270‑1 (MQ=255) accacAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATtgatgatga > 7:446605/1‑149 (MQ=255) cacaAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAAc > 6:405982/1‑149 (MQ=255) caAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACt > 6:7732/1‑92 (MQ=255) caAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACt < 5:7732/92‑1 (MQ=255) caAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATtgatga > 2:509850/1‑142 (MQ=255) aaGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGc < 8:27255/149‑1 (MQ=255) aaGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAACGATCCAGTAG‑CGTACTGCCCGATTATATCTTCTATTCCGCCAACATTGCTGTATTAAGGTTACGGTATTCGCAAAGTCATGTTGACGGTGAGCTGGCTGAGCGACCTGcga > 2:9825/1‑273 (MQ=255) aGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGaa > 8:459779/1‑144 (MQ=255) aGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGaa < 7:459779/144‑1 (MQ=255) gCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGCTTGTTTGTACCACCAGTGATACACCGGTAGAAGCTCTGGAGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CCTACTGGACGCTTATGTTTTCTATTCCGCAAACATTTCTGGATGAAGGTTACGGTATTAGAAACAGGATTTGGACGTGGTGCTGCGTGGGCGAccttcaa > 4:1504/1‑267 (MQ=255) ccGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGaa < 4:509845/142‑1 (MQ=255) ccGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCaaa < 7:274374/149‑1 (MQ=255) gCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATc > 4:44892/1‑163 (MQ=255) gCACTGGCGACACATTACCCGGCAGGGCTGCCGGTTGTTTGTACCACCAGTTATAAACCGGTAGAAGCTCTGGTGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGAAGGTTACGGTATTCGCAAAGGCATGTGGACGGTGAGCTGGCTGCGCGACATGCTAGGCGa < 1:10766/275‑1 (MQ=255) tGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGt < 2:44892/163‑1 (MQ=255) ggCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCaaa > 6:7679/1‑142 (MQ=255) ggCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCaaa < 5:7679/142‑1 (MQ=255) gCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGcc < 7:338459/149‑1 (MQ=255) acaTTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAg < 6:20316/149‑1 (MQ=255) aacaaccGGCAGTCCTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCtt < 8:73884/96‑1 (MQ=255) aacaaccGGCAGTCCTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCtt > 7:73884/6‑101 (MQ=255) aTTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGAt < 7:249099/149‑1 (MQ=255) aaccGGCAGTCCTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCa > 8:196563/3‑149 (MQ=255) accGGCAGTCCTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAg > 7:360656/2‑149 (MQ=255) cGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTa < 5:412904/149‑1 (MQ=255) ggCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATtgat < 7:99942/114‑1 (MQ=255) gCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGaaa < 7:353393/138‑1 (MQ=255) gCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGaaa > 8:353393/1‑138 (MQ=255) gACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGTACGGCAAAGCACTGCCGAAAGCTCCa < 8:273099/140‑1 (MQ=255) gACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGTACGGCAAAGCACTGCCGAAAGATCCa > 7:273099/1‑140 (MQ=255) gACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGa > 1:74035/1‑132 (MQ=255) aCTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACt > 7:444221/1‑149 (MQ=255) | TACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGG‑ATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAG‑CGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGAAGGTTACGGTATTCGCAAAGGCATGTGGACGGTGAGCTGGCTGCGCGACATGCTAGGCGA > NC_000913/2902229‑2902743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |