| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,918,022 | A→G | 5.9% | intergenic (+209/+23) | barA → / ← gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,918,022 | 0 | A | G | 5.9% | 220.1 / 3.7 | 68 | intergenic (+209/+23) | barA/gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| Reads supporting (aligned to +/- strand): ref base A (38/26); new base G (2/2); total (40/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.91e-01 | |||||||||||
ACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAGTAGCAATCGGCTTTTTATGACGCTGGTTTCAGATTGGTGACAAAGTGCCTGTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTTCATCACTTGATCCATATCGATTTCTACACCCAGCCCCGGTTTTTCTGGCACCTGTACCAGCCCGCCTTTGATCTCAAACGGTTCTTTGGTCAGGCGCTGATTGCCTTCCTGCCAAATCCAGTGCGTATCAATAGC > NC_000913/2917759‑2918296 | aCTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAGTAGCAATCGGCTTTTTATGACGCTGGTTTCAGATTGGTGACAAAGTGCCTGTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggtttt > 2:224284/1‑275 (MQ=255) ttgtcggtggaaaTCGGCTTTTTTTGACGCTGGTTTAAGATTGGTTACAAAGTGCCTGTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGa < 4:293274/263‑1 (MQ=255) tgtTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAGATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGTCGGTTTTGGTTTTCTGTCTTAACGCCCCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCCTTCCCATCCCATCGTCCCGCCCGCCCATCCCGTGTTTCTTATACAGTTTATg > 2:93117/1‑275 (MQ=255) ttATGCCGAATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCAGAACAGGCTATTTTGTGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggttt < 6:388427/149‑1 (MQ=255) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggttttg > 7:194670/1‑149 (MQ=255) gataaggcgTTAACGCCGCATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTc > 5:90477/6‑149 (MQ=255) gATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTc < 5:54402/149‑1 (MQ=255) ataaggcgTTAACGCCGCATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCt < 6:90477/145‑1 (MQ=255) ggcgTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTACTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCt > 5:340947/1‑149 (MQ=255) tAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCt > 2:236670/1‑241 (MQ=255) gCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATa < 4:236666/241‑1 (MQ=255) cTTATCCGGCCTAGAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCAt < 8:301776/149‑1 (MQ=255) gCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGACTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGgc < 8:380885/149‑1 (MQ=255) ccTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCCCATGGGCTTTCATCACTTTATCCATATCGATTTCTACAcc > 2:492612/1‑275 (MQ=255) aTTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTGCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGACCAGCCAGGAATCAGATAc > 2:515898/1‑171 (MQ=255) aTTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAAt > 2:343932/1‑164 (MQ=255) aaTTCAATGAATANAAAANTGATGTAGACCTGATACATAGCACAACATGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCGCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGAACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCa < 4:515893/171‑1 (MQ=255) aTTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGaa > 6:199510/1‑144 (MQ=255) aTTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGaa < 5:199510/144‑1 (MQ=255) tGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAAc < 8:22545/110‑1 (MQ=255) tGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAAc > 7:22545/1‑110 (MQ=255) tGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTccagccag > 6:106466/1‑149 (MQ=255) aaaaaTGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAg > 7:429570/1‑149 (MQ=255) atgTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCCTCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTTCATCACTTGGTCCATATCGATTTCTACACCCAGCCCCGTTTTTTCTGGCCACTTTACCAGCACCCCt > 4:347279/1‑275 (MQ=255) aCCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATTCTGCATTccc > 7:10590/1‑149 (MQ=255) aCCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGc > 2:120120/1‑173 (MQ=255) tGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTACAGCCAGGAATCAGATACTGCATTCCcatc > 7:23030/1‑149 (MQ=255) gATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGaa > 1:71443/1‑128 (MQ=255) gATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCgt < 4:120119/173‑1 (MQ=255) aTACATATCACAACAGACTATTTTGCGTTTAGCATCTGTCTCCAACCGGCTCCAGATAGAGCCGGTTTTGGTTTGCTGTCTTAACTCACCATGCACGGGC‑GCTTGTTATCGCAAGTCCAGCCAGCAATCCAATACTGCATTCCCATCCAATCGTCACTCCCGCCCCGCCCGGTTTTCTGATAGACCTCATGTGCTTCAATACCTTAATCCTTATCGTTTTCTACACCTACCCCGGGTTTTTACGGCACTGGTACCATCCCCCCCTTgccaccaa > 4:42479/1‑267 (MQ=255) aCATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggttttggtttt > 6:424938/1‑73 (MQ=255) aCATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggttttggtttt < 5:424938/73‑1 (MQ=255) cATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAg < 3:71443/128‑1 (MQ=255) aGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGc > 2:137499/1‑162 (MQ=255) gCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTTCATCACTTGATCCATATCGATTTCTACACCCGGCCCCGGTTTTTCTGGCACCTGTACCAGCCCGCCTTTGATTCCAAACGGtttt > 2:400630/1‑273 (MQ=255) gCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTAGTTTTCTGGCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAAGGTCCAGCCCGGAATCAGATACTGCATTCCCATGGCAACGTCACGACCGCCAAGCCCGTGTTTCTGCTACCGCTAATGGCCTTTCATTACTTTCTCCATTTCGATTTCCCCAACCAACCCCGGTTTTCGTGGCCACTGCAACAGCCCCCCTTTGACCTCAACCGGTTCt > 4:399589/1‑275 (MQ=255) caacaGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCgt < 4:137498/162‑1 (MQ=255) caacaGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTc > 4:413247/1‑167 (MQ=255) aacaGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTa > 6:210602/1‑97 (MQ=255) aacaGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTa < 5:210602/97‑1 (MQ=255) aacaGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACATCTCATGGGCTTTCATCACTTCATCCATATCGATTGCTACACCCAGCCCCGGTTTTTCTGGCATCTGTCCCCGCCCCACTTTTATCCCAAACGGTTATTTgg > 1:75256/1‑275 (MQ=255) acaGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCAcgcgc < 8:194670/149‑1 (MQ=255) aGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGAt < 2:413252/167‑1 (MQ=255) gCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggttttgg > 2:468818/1‑55 (MQ=255) ttttGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCggttttggtttt < 4:468813/55‑1 (MQ=255) tttGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGccc > 7:255775/1‑149 (MQ=255) gCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCgtg < 8:429570/149‑1 (MQ=255) aTCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCCTTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATa > 7:420823/1‑149 (MQ=255) aTCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATa > 6:89257/1‑149 (MQ=255) aGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAAc > 2:361820/1‑78 (MQ=255) gTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCgtg > 1:116324/1‑136 (MQ=255) tcAAACCGGCTCCAGAGAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTcc < 4:361815/78‑1 (MQ=255) caaaaCCGGCTCTATCTGGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCcatcgca > 8:145998/3‑110 (MQ=39) caaaaCCGGCTCTATCTGGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCcatcgca < 7:145998/108‑1 (MQ=39) cAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATTCTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCAt < 8:10590/149‑1 (MQ=255) cAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTc < 3:116324/136‑1 (MQ=255) cAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGa > 5:94855/1‑139 (MQ=255) cAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGa < 6:94855/139‑1 (MQ=255) aaaCCGGCTCTATCTGGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTc > 8:313483/1‑135 (MQ=255) aaaCCGGCTCTATCTGGAGCCGGTTATGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTc < 7:313483/135‑1 (MQ=255) aaaCCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTTCATCACTTGATCCATATCGATTTCTACACCCAGCCCCGGTTTTTCTGGCACCTGTACCAGCCCGCCTTTGATCCCAAACGGTTCTTTGGTCAGGCGCTGATTGCCTTTCTGCCAAATCCa > 2:466826/1‑275 (MQ=255) gCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCgtg > 2:298031/1‑125 (MQ=255) gCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTTCATCACTTGATCCATATCGATTTCTACACCCAGCCCCGGTTTTTCTGGCACCTGTACCAGCCCGCCTTTGATCTCAAACGGTTCTTTGGTCAGGCGCTGATTTCCTTCCTGCCAAATCCAGTGcct > 2:269083/1‑273 (MQ=255) cTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTtc < 5:106466/149‑1 (MQ=255) tCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTtca > 5:220426/1‑149 (MQ=255) cAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTc < 4:298027/125‑1 (MQ=255) cAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACGGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTTCATCACTTGATCCATATCGATTTCTACACCCAGCCCCGGTTTTTCTGGCACCTGTACCAGCCCGCCTTTGATCTCAAACg < 2:157974/225‑1 (MQ=255) aGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTtcatca > 6:249322/1‑149 (MQ=255) agagTCGGTTTATGTTTTCTGTCTTAACTACCCATACACGGGCGGCTTG‑TCTCGAACGGCGAGCCAGGAACCAGAGTCTGAATTCCCATCGCATCGTCACGAGCGCCAAGCCCGTGTTTCTTATACAACTCATGGGCTTTCATCACTTGTTCCATATCGCTTGCTACACCCAGCCCCGGTTTTTCTGGCACCTGTACGAGCCCGCCTTTGATCTCAAACGGTTCTTTGGTCAGGCGCTGATTGCCTTCCTGCCAAAACCAGTGCGTATCAATAGc < 4:400625/275‑1 (MQ=255) | ACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAATGGATGTCTTGTCGAGTAGCAATCGGCTTTTTATGACGCTGGTTTCAGATTGGTGACAAAGTGCCTGTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAACCAATTAAATTCAATGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTCCAGATAGAGCCGGTTTTGGTTTTCTGTCTTAACGCACCATGCACGGGC‑GCTTGTTATCGAACGTCCAGCCAGGAATCAGATACTGCATTCCCATCGCATCGTCACGCGCGCCAAGCCCGTGTTTCTGATACAGCTCATGGGCTTTCATCACTTGATCCATATCGATTTCTACACCCAGCCCCGGTTTTTCTGGCACCTGTACCAGCCCGCCTTTGATCTCAAACGGTTCTTTGGTCAGGCGCTGATTGCCTTCCTGCCAAATCCAGTGCGTATCAATAGC > NC_000913/2917759‑2918296 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |