| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 272,330:1 | +G | 5.2% | intergenic (+141/‑250) | insN → / → eyeA | pseudogene, IS911 transposase A;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related/novel sRNA, function unknown, CP4‑6 propahge |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 272,330 | 1 | . | G | 5.2% | 765.4 / 36.2 | 172 | intergenic (+141/‑250) | insN/eyeA | pseudogene, IS911 transposase A;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related/novel sRNA, function unknown, CP4‑6 propahge |
| Reads supporting (aligned to +/- strand): ref base . (87/76); new base G (3/6); total (90/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.15e-01 | |||||||||||
Only 100 of 178 total aligned reads displayed.
GACCTATAGTGTGCCCGGAGTTCAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGG > NC_000913/272183‑272476 | tataGTGTGCCCGGAGTTCAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCa > 4:331352/1‑148 (MQ=255) gCCCGGAGTTCAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGGCATGccgca < 3:899081/148‑4 (MQ=255) gCCCGGAGTTCAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCa < 4:170482/148‑1 (MQ=255) ccGGAGTTCAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGGCATG‑CCGCAggt < 1:1032257/149‑2 (MQ=255) ccGGAGTTCAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAggg < 2:896794/149‑1 (MQ=255) cGGAGTTCAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAggg > 4:40674/1‑148 (MQ=255) gAGTTCAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGa < 2:371554/149‑1 (MQ=255) aGTTCAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGa < 3:680237/148‑1 (MQ=255) ttCAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATg < 4:549222/148‑1 (MQ=255) cAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTa < 4:844852/148‑1 (MQ=255) ggcgggcATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAAcc > 3:681384/1‑148 (MQ=255) ggcATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCt > 4:1016269/1‑148 (MQ=255) ggATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAAc > 2:676635/1‑149 (MQ=255) gATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAAc > 4:562133/1‑148 (MQ=255) tGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACggg < 1:337631/149‑1 (MQ=255) ttAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑gggcatg < 2:73728/115‑6 (MQ=255) ttAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAA‑CCGCTGGCCACCGGGAtt > 1:553094/1‑149 (MQ=255) tAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGCGACCTGC‑GGAATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGAt > 4:82086/1‑148 (MQ=255) aaTGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGTCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGa > 1:796590/1‑149 (MQ=255) aTGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGa < 3:728916/148‑1 (MQ=255) aTGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAg > 1:351365/1‑149 (MQ=255) aTGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAAAGGGGATTGa < 4:517865/148‑1 (MQ=255) aCCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCga < 2:834894/149‑1 (MQ=255) aCCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCga < 1:79277/149‑1 (MQ=255) ccGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGGCATG‑CCGCAggtc < 2:919822/115‑3 (MQ=255) cgcgAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCgaga > 2:2429/1‑149 (MQ=255) gcgAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGAt < 2:1011313/149‑1 (MQ=255) gAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATc < 4:851735/148‑1 (MQ=255) ctgtctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTaa < 1:471381/149‑1 (MQ=255) tgtctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAg < 2:607346/149‑1 (MQ=255) tctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGa > 2:1023831/1‑128 (MQ=255) tctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGa < 1:1023831/128‑1 (MQ=255) tctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGcc > 2:414616/1‑149 (MQ=255) ctgGAATATTGAACTGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCg > 4:366636/1‑135 (MQ=255) ctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTg < 4:655564/130‑1 (MQ=255) tgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCga > 1:621725/1‑149 (MQ=255) tgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCga < 1:251010/149‑1 (MQ=255) tgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCga < 2:73759/149‑1 (MQ=255) ggAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACg < 4:947413/121‑1 (MQ=255) ggAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACg > 3:947413/1‑121 (MQ=255) ggAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGAt > 4:382289/1‑137 (MQ=255) ggAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGAt < 3:382289/137‑1 (MQ=255) gAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCgag > 3:148865/1‑148 (MQ=255) atTGAACCGGTAACGCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAgatga < 3:882675/148‑1 (MQ=255) ttGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATc < 2:7659/149‑1 (MQ=255) ttGAACCGGTAACTCACGATGAGAAACC‑‑‑CAATCCCACCAGCTGTTACGGCGGAGAACCAGAGCGGCAGTAACGTGC‑GGCGTCCCCGCAGGGGGGTGTAGCAAGCTGACAACGGGGGTGAAGGCGAGGTCACTAAGACGAGATGATCCt > 3:331565/1‑148 (MQ=255) tGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGAt < 2:206860/97‑1 (MQ=255) tGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGAt > 1:206860/1‑97 (MQ=255) aaCCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGAt < 1:1009320/95‑1 (MQ=255) aaCCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGAt > 2:1009320/1‑95 (MQ=255) ccGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCaa > 2:224823/1‑149 (MQ=255) ccGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCa < 3:433836/148‑1 (MQ=255) cGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAg < 2:621725/149‑1 (MQ=255) aCTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTaa < 1:91208/149‑1 (MQ=255) aCTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTa < 3:560067/148‑1 (MQ=255) tCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAg < 3:225016/148‑1 (MQ=255) cACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGGTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGt > 3:848526/1‑148 (MQ=255) gATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTg > 1:709117/1‑149 (MQ=255) aTGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTg > 3:281716/1‑148 (MQ=255) aTGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGAGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTg > 3:1040317/1‑148 (MQ=255) gagaAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGaa < 4:783769/148‑1 (MQ=255) aaaCCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAgg > 4:692872/1‑148 (MQ=255) aaCCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGtt < 2:471218/149‑1 (MQ=255) ccAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTgaa > 1:123588/1‑149 (MQ=255) acaaTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAgag > 3:660233/1‑62 (MQ=255) acaaTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCGTCa > 4:680682/1‑123 (MQ=255) caaTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTgaagaa < 4:19579/148‑1 (MQ=255) aTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACa > 4:748223/1‑148 (MQ=255) aTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACAt < 2:796590/149‑1 (MQ=255) cccACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTga > 3:890229/1‑140 (MQ=255) cccACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTga < 4:890229/140‑1 (MQ=255) cccACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGa < 2:426308/149‑1 (MQ=255) cACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGa > 3:173770/1‑147 (MQ=255) cACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAAc > 1:968748/1‑149 (MQ=255) cACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAAc > 1:943965/1‑149 (MQ=255) aCCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGagca > 1:850199/1‑146 (MQ=255) gtgtGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACt < 1:90614/122‑1 (MQ=255) gtgACGGTGGAGAACCTGAGCGGCAGTGAACTGC‑GGCATGCTCGCAGGGTGATGTAACCCGCCGACAACGTGCATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTCCTGAAAGGTTGAAGAACATGAACCCGTTaa < 3:652952/148‑1 (MQ=255) tgACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATc < 2:709117/149‑1 (MQ=255) gACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATcc > 1:917452/1‑149 (MQ=255) gACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGGTGAAGAACATGAACCCGTTAATcc > 2:861112/1‑149 (MQ=255) ggTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTgaagaa < 3:987389/129‑1 (MQ=255) ggTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTgaagaa > 4:987389/1‑129 (MQ=255) ggAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCctct > 2:161860/1‑149 (MQ=255) agaACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCtgt < 1:58888/149‑1 (MQ=255) aaCCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTgg < 1:423602/149‑1 (MQ=255) tGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGt > 2:1044841/1‑147 (MQ=255) tGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTg < 1:1045514/149‑1 (MQ=255) aGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGa > 4:319912/1‑148 (MQ=255) ggCAGTGACCTGC‑GGCATGTCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAAc < 1:1006187/149‑1 (MQ=255) cAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACg < 3:1036103/148‑1 (MQ=255) aGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTc < 2:251109/149‑1 (MQ=255) gTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTca > 1:547821/1‑149 (MQ=255) gTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTc > 3:964848/1‑148 (MQ=255) tGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTca < 3:562133/148‑1 (MQ=255) aCCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTcacca > 2:600414/1‑149 (MQ=255) ccTGCGGGCATG‑CCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTcaccac > 1:738163/1‑149 (MQ=255) cTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACg > 2:907149/1‑149 (MQ=255) cTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACg > 1:242462/1‑149 (MQ=255) gC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACgg > 3:810868/1‑148 (MQ=255) | GACCTATAGTGTGCCCGGAGTTCAGGGCGGGCATGGATGCTTAAATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGC‑GGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGG > NC_000913/272183‑272476 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |