Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,276,890 G→A 5.2% intergenic (+37/‑112) garD → / → prlF D‑galactarate dehydrogenase/antitoxin of the SohA(PrlF)‑YhaV toxin‑antitoxin system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,276,8900GA 5.2% 482.4 / 8.0 146intergenic (+37/‑112)garD/prlFD‑galactarate dehydrogenase/antitoxin of the SohA(PrlF)‑YhaV toxin‑antitoxin system
Reads supporting (aligned to +/- strand):  ref base G (75/62);  new base A (4/4);  total (80/66)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 146 total aligned reads displayed.

AGTTGTTCCACTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGCTCTCACGCTGTACTGACC  >  NC_000913/3276744‑3277037
                                                                                                                                                   |                                                                                                                                                   
aGTTGTTCCACTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTg                                                                                                                                                   <  2:256440/149‑1 (MQ=255)
aGTTGTTCCACTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTCCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTg                                                                                                                                                   <  2:1010345/149‑1 (MQ=255)
  ttgttCCACTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGc                                                                                                                                                  >  3:85606/1‑148 (MQ=255)
   tgttCCACTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGcc                                                                                                                                                 >  3:802890/1‑148 (MQ=255)
     ttCCACTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATg                                                                                                                                              >  1:68036/1‑149 (MQ=255)
       ccACTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGt                                                                                                                                             <  3:155024/148‑1 (MQ=255)
         aCTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGtttt                                                                                                                                          >  2:450850/1‑149 (MQ=255)
         aCTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑ACTAAGGCCATGtttt                                                                                                                                          <  1:658854/149‑1 (MQ=255)
          cTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑ACTAAGGCCATGtttt                                                                                                                                          >  3:476079/1‑148 (MQ=255)
           tttATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTa                                                                                                                                        <  1:450850/149‑1 (MQ=255)
            ttATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTa                                                                                                                                        >  4:150492/1‑148 (MQ=255)
            ttATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTAt                                                                                                                                       <  2:68036/149‑1 (MQ=255)
             tATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTAt                                                                                                                                       <  4:294993/148‑1 (MQ=255)
               ttCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑ACTAAGGCCATGttttgcgag                                                                                                                                     <  4:476079/148‑6 (MQ=255)
                tctcGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGtt                                                                                                                                   <  1:842233/149‑1 (MQ=255)
                tctcGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGtt                                                                                                                                   >  2:842233/1‑149 (MQ=255)
                    gACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTaaa                                                                                                                               <  1:538188/149‑1 (MQ=255)
                    gACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTaa                                                                                                                                <  4:644046/148‑1 (MQ=255)
                     aCGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAg                                                                                                                              <  1:853660/149‑1 (MQ=255)
                      cGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAg                                                                                                                              >  3:616864/1‑148 (MQ=255)
                          gCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAATGCCATGTTTTTATTGTTTAAAGcccc                                                                                                                          <  3:71005/148‑1 (MQ=255)
                            cAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCAc                                                                                                                       >  2:60001/1‑149 (MQ=255)
                             aGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCAc                                                                                                                       >  4:155363/1‑148 (MQ=255)
                               cGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGt                                                                                                                     >  4:239249/1‑148 (MQ=255)
                                  gaagaagaaAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTaaa                                                                                                                               >  1:272210/1‑135 (MQ=255)
                                   aagaagaaAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCAtt                                                                                                                >  2:586261/1‑149 (MQ=255)
                                   aagaagaaAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCAtt                                                                                                                <  2:1043730/149‑1 (MQ=255)
                                      aagaaAGCCTTCTCGGATCAATGGGGGCTGAATAACCAGCTGACGGTGTGTAACCCGGCACAGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTATTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATtaat                                                                                                             >  2:980286/1‑149 (MQ=255)
                                        gaaAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATtaataa                                                                                                           >  2:25653/1‑149 (MQ=255)
                                        gaaAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATtaataa                                                                                                           >  2:869819/1‑149 (MQ=255)
                                        gaaAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATtaata                                                                                                            >  4:797782/1‑148 (MQ=255)
                                        gaaAACATTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTTACCCGGCACCGGTGACCTGATTTATTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATtaataa                                                                                                           >  2:525756/1‑149 (MQ=255)
                                         aaaaCCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATtaataa                                                                                                           >  3:53659/1‑148 (MQ=255)
                                           aaCCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTAt                                                                                                                                       >  2:327167/1‑118 (MQ=255)
                                           aaCCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAAtgc                                                                                                        >  2:494965/1‑149 (MQ=255)
                                           aaCCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATAGC‑CTTAGTGCCATGTTTTTAt                                                                                                                                       <  1:327167/118‑1 (MQ=255)
                                             ccTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAAtgca                                                                                                       <  3:155363/148‑1 (MQ=255)
                                             ccTTCTCGGATCAATGGGGGCTACATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAAtgca                                                                                                       <  4:288451/148‑1 (MQ=255)
                                              cTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAAtgcatt                                                                                                     >  2:617598/1‑149 (MQ=255)
                                               ttCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAAtgcatt                                                                                                     >  3:757816/1‑148 (MQ=255)
                                                  tcGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAAtgcatttgca                                                                                                 >  1:297867/1‑149 (MQ=255)
                                                  tcGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAAtgcatttgca                                                                                                 >  1:481095/1‑149 (MQ=255)
                                                  tcGGATCAATGGGGGCTGCATAACCAGCTGGCGGTATTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAAtgcatttgca                                                                                                 <  1:205457/149‑1 (MQ=255)
                                                     gATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAAtgcatttgcatt                                                                                               <  4:951707/148‑1 (MQ=255)
                                                     gATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAAtgcatttgcatt                                                                                               >  3:143200/1‑148 (MQ=255)
                                                       tCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTAc                                                                                             >  3:887786/1‑148 (MQ=255)
                                                           tGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTa                                                                                         >  4:64872/1‑148 (MQ=255)
                                                                gCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCaa                                                                                   >  2:568520/1‑149 (MQ=255)
                                                                  tGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGc                                                                                 <  1:118228/149‑1 (MQ=255)
                                                                  tGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGc                                                                                 <  2:230454/149‑1 (MQ=255)
                                                                  tGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGc                                                                                 >  1:531400/1‑149 (MQ=255)
                                                                      tAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTta                                                                              >  3:628042/1‑148 (MQ=255)
                                                                        agcAGCTGGCGGTGTATAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAATGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATaa                                                                           <  2:312056/147‑1 (MQ=255)
                                                                           aGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGGCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCTCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAAttt                                                                        >  1:95237/1‑149 (MQ=255)
                                                                             cTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGa                                                                      <  1:574153/149‑1 (MQ=255)
                                                                               ggCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGc                                                                    <  2:123641/149‑1 (MQ=255)
                                                                                  ggTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGa                                                                 <  2:435816/149‑1 (MQ=255)
                                                                                      tttAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAAc                                                             <  2:15729/149‑1 (MQ=255)
                                                                                       ttAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTGGTTCAAGCTTATAATTTGAGCAGAAAAc                                                             <  4:754609/148‑1 (MQ=255)
                                                                                       ttAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAAc                                                             >  4:850037/1‑148 (MQ=255)
                                                                                        tAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAg                                                           <  2:297867/149‑1 (MQ=255)
                                                                                          aCCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGccc                                                                                                                           >  4:926049/1‑83 (MQ=255)
                                                                                           cccGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGc                                                         >  4:850868/1‑148 (MQ=255)
                                                                                                 aCCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTaaaa                                                  <  2:475955/149‑1 (MQ=255)
                                                                                                        aCCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTAc                                                                                             <  2:379573/99‑1 (MQ=255)
                                                                                                        aCCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTAc                                                                                             >  1:379573/1‑99 (MQ=255)
                                                                                                          cTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTAcc                                                                                            <  2:556479/98‑1 (MQ=255)
                                                                                                          cTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTg                                          <  3:792567/148‑1 (MQ=255)
                                                                                                           tGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGaa                                        >  2:364447/1‑149 (MQ=255)
                                                                                                           tGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGa                                         >  3:203302/1‑148 (MQ=255)
                                                                                                            gATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGaa                                        <  3:1057737/148‑1 (MQ=255)
                                                                                                            gATTTCTTTTATAACTTCCCGCGCAAAACATGGC‑CTTAATGCCATGTTTTTATTGTTTAAAGCCCCCACGTCTATTAATAATGCATTTGCATTACATTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGGTGTAAAAGGACAGTGaa                                        <  4:923924/148‑1 (MQ=255)
                                                                                                             aTTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTGTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAAt                                       >  4:492593/1‑148 (MQ=255)
                                                                                                              tttCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTATTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATGTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATc                                      >  3:723207/1‑148 (MQ=255)
                                                                                                                tCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATg                                   <  1:566714/149‑1 (MQ=255)
                                                                                                                  ttttGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGcc                                 >  1:611559/1‑149 (MQ=255)
                                                                                                                  ttttGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGcc                                 >  1:956643/1‑149 (MQ=255)
                                                                                                                   tttGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGcc                                 >  4:246547/1‑148 (MQ=255)
                                                                                                                      ggAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGa                                         <  2:195486/137‑1 (MQ=255)
                                                                                                                      ggAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGa                                         >  1:195486/1‑137 (MQ=255)
                                                                                                                       gAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTa                            >  2:489469/1‑149 (MQ=255)
                                                                                                                       gAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTa                            <  1:980286/149‑1 (MQ=255)
                                                                                                                        aaCGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTaa                           >  1:555055/1‑149 (MQ=255)
                                                                                                                           gTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATgc                        <  2:531400/149‑1 (MQ=255)
                                                                                                                           gTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATgc                        >  1:592766/1‑149 (MQ=255)
                                                                                                                            tctcTCGCAAAACATGGC‑CTTAGTGCCATGTTATTATTGTTTAAAGCCCCCACGTCCGTTATTAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTGGAGCAAAAAACAGGCTGAAAAAAGACAGTAAATCATGCCCGCTCATgct                       >  2:916600/4‑149 (MQ=255)
                                                                                                                            tCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATgc                        >  3:168358/1‑148 (MQ=255)
                                                                                                                             cccTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATgct                       >  3:210022/1‑148 (MQ=255)
                                                                                                                                tCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTTAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATgctcgc                    >  4:98873/1‑148 (MQ=255)
                                                                                                                                 ataaaaaCATGGCACTAAG‑GCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATgctcgctc                  >  1:1054573/4‑149 (MQ=255)
                                                                                                                                   cAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGctct                 >  4:413456/1‑148 (MQ=255)
                                                                                                                                     aaaCATGGC‑ACTAAGGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGCTCTCAc              >  2:793001/1‑149 (MQ=255)
                                                                                                                                       aCATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGCTCTCACg             >  3:978969/1‑148 (MQ=255)
                                                                                                                                       aCATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGCTCTCACg             >  3:554275/1‑148 (MQ=255)
                                                                                                                                         aTGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGCTCTCACGCTg          >  1:834335/1‑149 (MQ=255)
                                                                                                                                           ggC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGCTCTCACGCTGt         <  3:98873/148‑1 (MQ=255)
                                                                                                                                               cTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGCTCTCACGCTGTACt      <  3:522556/148‑1 (MQ=255)
                                                                                                                                               cTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGCTCTCACGCTGTACTg     >  2:797647/1‑149 (MQ=255)
                                                                                                                                                ttAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGCTCTCACGCTGTACTGa    <  1:869819/149‑1 (MQ=255)
                                                                                                                                                ttAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGCTCTCACGCTGTACTGa    >  1:162249/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
AGTTGTTCCACTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGATTTCTTTTGGAACGTCCCTCGCAAAACATGGC‑CTTAGTGCCATGTTTTTATTGTTTAAAGCCCCCACGTCCATTAATAATGCATTTGCATTACCTTAGTTCAAGCTTATAATTTGAGCAGAAAACAGGCTGTAAAAGGACAGTGAATCATGCCCGCTAATGCTCGCTCTCACGCTGTACTGACC  >  NC_000913/3276744‑3277037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑