| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,901,029 | Δ1 bp | 5.7% | coding (557/1557 nt) | yoaE ← | putative membrane protein/conserved protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,901,029 | 0 | A | . | 5.7% | 589.3 / 27.0 | 174 | coding (557/1557 nt) | yoaE | putative membrane protein/conserved protein |
| Reads supporting (aligned to +/- strand): ref base A (76/85); new base . (4/6); total (82/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.07e-01 | |||||||||||
Only 100 of 185 total aligned reads displayed.
AAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGC > NC_000913/1900882‑1901177 | aaGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGcaccac < 4:995089/149‑1 (MQ=255) gTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGcaccacca > 1:150220/1‑149 (MQ=255) gACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTg < 3:689751/149‑1 (MQ=255) gACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTg > 4:1217420/1‑149 (MQ=255) aCGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTgg < 2:150220/149‑1 (MQ=255) aCGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTgg > 1:1001310/1‑149 (MQ=255) cgcgCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTgg‑g < 3:1217420/149‑1 (MQ=255) cgcgCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTgg‑g < 3:40966/149‑1 (MQ=255) gcgcAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTgg‑gg > 2:964730/1‑149 (MQ=255) cgcAATCTGGTTAATCACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGt < 4:162727/149‑1 (MQ=255) cgcAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCTTGG‑GGt < 2:1128088/149‑1 (MQ=255) gcAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTg > 1:947705/1‑149 (MQ=255) gcAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTg > 2:374672/1‑149 (MQ=255) aaTCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCt > 3:699537/1‑149 (MQ=255) aaTCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCt > 1:250549/1‑149 (MQ=255) aTCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTg > 3:475753/1‑149 (MQ=255) tCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTgg > 2:591214/1‑149 (MQ=255) tCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACC‑CCACGGTGGTGGTGCtct > 2:1244992/1‑147 (MQ=38) ggTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACC‑CCACGGTGGTGGTGCtctgtc < 2:1275966/149‑6 (MQ=255) gTTAAACCCTTTGTTGAAGATCGAATAGCCAATCGCGGCATGCAGGTAACCTTTAGGATTGTGGAAACCGAAACCTTCTGCCACCAGACACAGACCAATCATTAACAAGAAGCTCAGACAGAGCAACACCTCCGTGG‑GGTGCTGTTTaa < 4:144220/149‑1 (MQ=37) gTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTaa > 4:1565624/1‑149 (MQ=255) gTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACC‑CCACGGTGGTGGTGCtctgtct < 1:1295324/149‑7 (MQ=37) aaCACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGaa > 1:978173/1‑149 (MQ=255) acTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATcg > 1:686360/1‑149 (MQ=255) cTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATcgc < 1:1219948/149‑1 (MQ=255) ttCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCGCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATcgcg < 1:1101291/149‑1 (MQ=255) cGATGATGATCGAGAAGCTAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAATCTCAGACAGTGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTc > 4:122423/1‑149 (MQ=255) gatgatgatCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCa > 4:1398812/1‑149 (MQ=255) gatCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGtt < 3:1401009/149‑1 (MQ=255) gatCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGtt < 3:845751/149‑1 (MQ=255) atCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGttt < 4:83340/149‑1 (MQ=255) atCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGttt < 2:1339144/149‑1 (MQ=255) atCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGttt < 2:686360/149‑1 (MQ=255) cGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAAACATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTgg < 4:270869/149‑1 (MQ=255) gagaAGCCAATCGCGGCATACATGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGa < 1:1366020/149‑1 (MQ=255) gagaAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGa > 2:369749/1‑149 (MQ=255) agaAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACC‑CCACGGTGGTGGTGCtctgtct < 1:863659/126‑7 (MQ=37) agaAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACC‑CCACGGTGGTGGTGCtctgtct > 2:863659/1‑120 (MQ=37) aGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGcc < 3:781793/149‑1 (MQ=255) ccAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCCCCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAg < 4:896183/149‑1 (MQ=255) aTCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCaa < 1:647532/149‑1 (MQ=255) gCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAAc < 1:1193792/149‑1 (MQ=255) aTACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCg > 4:533265/1‑149 (MQ=255) aTACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCg > 4:195661/1‑149 (MQ=255) tACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGc > 2:1546233/1‑149 (MQ=255) aGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTgg < 2:1589108/127‑1 (MQ=255) aGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTgg > 1:1589108/1‑127 (MQ=255) aGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGa < 1:907075/128‑1 (MQ=255) aGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGa > 2:907075/1‑128 (MQ=255) gTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCg > 3:1387253/1‑149 (MQ=255) cTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATc > 3:296789/1‑149 (MQ=255) cTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATc < 3:151941/149‑1 (MQ=255) tttCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCTCCATCGCaa > 1:1259241/1‑146 (MQ=255) tttCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCaa < 2:1259241/146‑1 (MQ=255) tttCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCa > 4:1061909/1‑149 (MQ=255) tttCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCa > 1:526184/1‑149 (MQ=255) tttCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCa > 2:1008594/1‑149 (MQ=255) tgGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACcgccgc < 1:1008594/149‑1 (MQ=255) ggAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCgccgcc > 4:368429/1‑149 (MQ=255) gaaaccgaaaccTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAAc > 1:824966/1‑87 (MQ=255) gaaaccgaaaccTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAAc < 2:824966/87‑1 (MQ=255) aaaccgaaaccTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTgg‑g < 1:209106/74‑1 (MQ=255) aaccgaaaccTTCTGCCACCAGACTCAGACCAGTCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCcatc > 3:858813/1‑149 (MQ=255) accTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCg < 3:1061909/149‑1 (MQ=255) ttCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCa < 1:196380/116‑1 (MQ=255) ttCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCa > 2:196380/1‑116 (MQ=255) tGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCTAGCAACATAACCGCCATCGCAATCACTACCGCGGCCATCATCACCGGCAGAt < 4:1332779/149‑1 (MQ=255) gCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGtt > 4:432864/1‑68 (MQ=255) gCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGtt < 3:432864/68‑1 (MQ=255) accaGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGtt < 1:369749/149‑1 (MQ=255) ccaGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGCTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTa > 1:78629/1‑149 (MQ=255) caGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTaa < 1:1568053/149‑1 (MQ=255) aCCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTa < 1:1378407/149‑1 (MQ=255) ccAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTAc < 3:1190841/149‑1 (MQ=255) cAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTATCGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTAc < 2:1366689/109‑1 (MQ=255) cAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCcatcat < 1:828936/121‑1 (MQ=255) cAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCcatcat > 2:828936/1‑121 (MQ=255) aTCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCa < 3:1029185/103‑1 (MQ=255) aTCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCa > 4:1029185/1‑103 (MQ=255) aTTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGCTAACCAGCCCTACTGCGGt > 3:1247116/1‑149 (MQ=255) ttAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGc > 1:723421/1‑88 (MQ=255) ttAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGc < 2:723421/88‑1 (MQ=255) aCAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAAtt < 1:623752/149‑1 (MQ=255) aCAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAAtt > 3:628048/1‑149 (MQ=255) ggAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAAcc > 1:769851/1‑80 (MQ=255) ggAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAAcc < 2:769851/80‑1 (MQ=255) ggAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTAcc < 2:21956/149‑1 (MQ=255) ggAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTAcc < 1:1370631/149‑1 (MQ=255) gAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCg < 1:51466/149‑1 (MQ=255) aGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCCCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCa < 4:904894/149‑1 (MQ=255) tCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATcc > 4:495966/1‑149 (MQ=255) tCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATcc > 1:389587/1‑149 (MQ=255) agacagaGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCaa > 3:72580/1‑149 (MQ=255) gacagaGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAAc > 4:44047/1‑149 (MQ=255) cagaGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACga < 2:523168/149‑1 (MQ=255) agCACCGCCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATAACCGGCAGATGGTTAACCATCCCTGCTGCAGTAATTACCGCAACCAACGagaa < 4:1508865/149‑1 (MQ=255) agCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGagaa < 4:72580/149‑1 (MQ=255) caccaccacCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCACCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAAATACCGCATCCAACGagaaga < 2:323985/149‑1 (MQ=255) accaccaccGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGAc > 2:140219/1‑149 (MQ=255) caccaccGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACgg > 3:262456/1‑149 (MQ=255) | AAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGG‑GGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTGCAGTAATTACCGCATCCAACGAGAAGACGGC > NC_000913/1900882‑1901177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |