| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 897,968:1 | +A | 5.5% | intergenic (+39/‑21) | potI → / → ybjO | putrescine ABC transporter permease/DUF2593 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 897,968 | 1 | . | A | 5.5% | 698.7 / 31.8 | 164 | intergenic (+39/‑21) | potI/ybjO | putrescine ABC transporter permease/DUF2593 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (79/76); new base A (6/2); total (85/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.44e-01 | |||||||||||
Only 100 of 169 total aligned reads displayed.
AACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGAT > NC_000913/897821‑898116 | aTTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATg > 3:104070/1‑149 (MQ=255) aTCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTcgc > 2:1595048/1‑149 (MQ=255) aTCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTcgc > 2:470641/1‑149 (MQ=255) cTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGc > 3:66367/1‑149 (MQ=255) tCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCGCCATG‑CGCGGCa < 3:1357924/149‑1 (MQ=255) ggCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCAtt > 4:1131681/1‑149 (MQ=255) ggCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCAtt < 2:817389/149‑1 (MQ=255) cgGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGttt < 1:930608/149‑1 (MQ=255) ggTAGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGtttt < 4:744146/149‑1 (MQ=255) tCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCa < 4:230447/149‑1 (MQ=255) tCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCAGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCa < 3:1354304/149‑1 (MQ=255) cGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCAt < 4:1226894/149‑1 (MQ=255) cGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCAt < 1:442444/149‑1 (MQ=255) tGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGa < 3:804406/149‑1 (MQ=255) tCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACg > 1:665657/1‑149 (MQ=255) ggATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGCAGACGaa > 1:319843/1‑149 (MQ=255) aTTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAAc < 3:361098/149‑1 (MQ=255) tttATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACACCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACg > 2:581061/1‑149 (MQ=255) tATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGtt < 2:1099984/149‑1 (MQ=255) aTCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTg < 1:895069/149‑1 (MQ=255) tCGCCTGTTATCTGATGGCTCGCGCAGAAAAACAGCGGATACACGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTgg > 2:854278/1‑149 (MQ=255) cGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGtt > 4:50219/1‑146 (MQ=255) cGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGtt < 3:50219/146‑1 (MQ=255) gCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGa > 2:1543503/1‑149 (MQ=255) cTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGAtt > 1:201138/1‑149 (MQ=255) tGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGAttt > 2:94993/1‑149 (MQ=255) ggTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGAtttt < 2:796080/149‑1 (MQ=255) gTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGAttttt > 1:1203696/1‑149 (MQ=255) cTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAg < 4:841509/149‑1 (MQ=255) gATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGaa > 1:647793/1‑149 (MQ=255) gATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGaa < 1:178113/149‑1 (MQ=255) gATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGaa > 3:804393/1‑149 (MQ=255) gATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGaa > 3:644500/1‑149 (MQ=255) tGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGaaaa < 3:1257710/149‑1 (MQ=255) gcgcAGAAAAACAGCGGATACGCGACATCCGGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCtt < 1:1033561/149‑1 (MQ=255) gcgcAGAAAAACAGCGGATACGCGACATCCAGCGTGCAACACGTGGCTGAAGACACTAAAACTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCtt < 4:1227238/149‑1 (MQ=255) cgcAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTc > 1:713766/1‑149 (MQ=255) aGAAAAACAGCGGATACGCGACCTCCAGCGTGGAAGACGTGGCTGAAGACACTAAAATTTGCCATCCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATc < 2:1340059/143‑1 (MQ=255) aGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATc > 1:1340059/1‑143 (MQ=255) aGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCAtc > 1:1174997/1‑149 (MQ=255) gAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCAgct > 3:1043784/1‑149 (MQ=255) aaaCAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGaaaa > 4:478083/1‑135 (MQ=255) aaaCAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGaaaa < 3:478083/135‑1 (MQ=255) aaaCAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCAt > 1:162960/1‑149 (MQ=255) aGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGGAAACATCTTCATCTCATGCTc > 3:635502/1‑149 (MQ=255) aGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTc < 2:201138/149‑1 (MQ=255) cGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGc < 2:319843/149‑1 (MQ=255) ggATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGcc > 3:850574/1‑149 (MQ=255) ggATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGcc > 2:1578296/1‑149 (MQ=255) gATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCt < 4:1369429/149‑1 (MQ=255) aCGCGACAACCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGaa < 4:1043784/149‑1 (MQ=255) gcgACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAAtg > 3:1517114/1‑149 (MQ=255) gcgACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAAtg > 1:297690/1‑149 (MQ=255) aCATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGc > 1:772654/1‑149 (MQ=255) aCATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGc < 1:1578296/149‑1 (MQ=255) aGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCGTgcgc > 1:1214213/1‑149 (MQ=255) aGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTgcgc > 2:349678/1‑149 (MQ=255) aGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTgcgc > 2:633560/1‑149 (MQ=255) tGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGt < 3:11452/149‑1 (MQ=255) aaGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCa > 3:835069/1‑149 (MQ=255) aGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAg < 3:434076/149‑1 (MQ=255) aCGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGt < 2:1203696/149‑1 (MQ=255) gTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTgg > 1:1444976/1‑149 (MQ=255) ggCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTggcg < 2:713766/149‑1 (MQ=255) cTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTggcggc < 1:633560/149‑1 (MQ=255) tGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGgcggcg > 1:333018/1‑149 (MQ=255) gAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGgcgc > 2:1425659/1‑149 (MQ=255) aGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTc < 4:732956/149‑1 (MQ=255) gACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCa > 1:1303033/1‑105 (MQ=255) gACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCg < 4:1024456/149‑1 (MQ=255) tAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCa > 1:1061653/1‑54 (MQ=255) tAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCa < 2:1061653/54‑1 (MQ=255) tAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCt > 3:356336/1‑104 (MQ=255) tAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCt < 4:356336/104‑1 (MQ=255) tAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGt < 2:56623/133‑1 (MQ=255) tAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCatt > 1:51788/1‑149 (MQ=255) tAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCatt > 1:558550/1‑149 (MQ=255) ttttGTCAACGTGGGAACATAGTGGGGCA‑TATGTCACGGCAATGTCTTCATCTCAGGCGAGACGGTGGGAGTTTGTGAGAGAACATGTTCCTCTCATGCTCATCTGAATGTGCCTGCGCTGGTGCAGGTGGCGCCGCTCGCCCttatta < 4:974496/148‑1 (MQ=255) aTTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCAttatta < 4:732464/149‑1 (MQ=255) ttGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATg < 4:825880/149‑1 (MQ=255) cAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGCAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATcc > 4:1051134/1‑149 (MQ=255) aaCCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCg > 3:523371/1‑149 (MQ=255) aaCCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCg > 2:1179584/1‑149 (MQ=255) aCCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGt < 2:665657/149‑1 (MQ=255) aCCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGt < 4:66367/149‑1 (MQ=255) cTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTgg > 2:325371/1‑149 (MQ=255) tGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGc < 4:849199/149‑1 (MQ=255) ggCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAAtgt < 2:1249655/99‑1 (MQ=255) ggCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAAtgt > 1:1249655/1‑99 (MQ=255) tACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCg > 1:127170/1‑149 (MQ=255) aaacaaTGCCGCGACATG‑CGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATtattat < 3:758130/130‑1 (MQ=255) aaacaaTGCCGCGACATG‑CGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGCTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGa > 3:1364319/5‑149 (MQ=255) cATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACCAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGAc > 4:1336667/1‑149 (MQ=255) aacaaTGCCGCGACATG‑CGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCTCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGAc > 1:738333/4‑149 (MQ=255) aacaaTGCCGCGACATG‑CGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGAc > 1:1510249/4‑149 (MQ=255) aTAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCatta < 4:155283/128‑1 (MQ=255) aTAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCatta > 3:155283/1‑128 (MQ=255) aaTGCCGCGACATG‑CGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTg > 2:1027010/1‑149 (MQ=255) gcg‑cATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGAc > 3:965805/1‑140 (MQ=255) g‑cATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTgatgat > 3:214555/1‑149 (MQ=255) | AACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGAAGACACTAAAATTTGCCAACCTGGCTACATAATGCCGCG‑CATGTCGCGGCATTGTTTTCATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGAT > NC_000913/897821‑898116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |