BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3423376 =	137 (0.800)	30 (0.190) +TTGATGT	8/242	NT	19.2%	intergenic (+182/+47)	yhdZ/rrfF	putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon
*	?	NC_000913	= 4213155	130 (0.760)	30 (0.190) +TTGATGT	8/242	NT	19.2%	noncoding (116/120 nt)	rrfE	5S ribosomal RNA of rrnE operon

Only 100 of 168 total aligned reads displayed.

AGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAA  >  NC_000913/4213018‑4213302

aGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTa                                                                                                                                           <  1:1482755/149‑1 (MQ=31)

 gCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAg                                                                                                                                          <  3:1251371/149‑1 (MQ=32)

     tCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaaaa                                                                                                                                      >  4:1410538/1‑149 (MQ=35)

     tCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGAGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaaaa                                                                                                                                      >  3:668088/1‑149 (MQ=25)

       taataAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGacatcaaataaaacaaaa                                                                                                                                    >  2:1327618‑M2/3‑131 (MQ=255)

       tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGAGGTCCCAACTGACCCCATGCCGAACTAAGAAGTGAAACGCCGTAGCGCCGGTGGTAGTGTGGGGTCTCCCCATGCGAGACTAGGGAACTGCCAGGCATCAAATTAGAAAAAc                                                                                                                                    >  3:978600/1‑149 (MQ=11)

        gATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAcc                                                                                                                                   >  3:1101813/1‑149 (MQ=38)

         aTAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAccc                                                                                                                                  <  2:1570905/149‑1 (MQ=38)

          tAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGGAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCAAGCCTTCAATTTAGaaaacaagt                                                                                                                                 >  3:187030/1‑144 (MQ=11)

          tAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAcccc                                                                                                                                 <  2:679148/149‑1 (MQ=39)

             aaCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCggc                                                                                                                              >  4:435974/1‑148 (MQ=255)

              aCAGTATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGGACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGCGGGGTCTCCCCATGCGAGAGTAGGTAACTGCCAGGCATCAAATTAGAAAAACCCCGCTc                                                                                                                             >  2:444108/1‑149 (MQ=14)

              aCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCggcc                                                                                                                             >  1:612815/1‑147 (MQ=255)

              aCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTc                                                                                                                             >  1:926713/1‑149 (MQ=255)

              aCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTc                                                                                                                             >  3:844441/1‑149 (MQ=255)

                   aTTTGCCGGGCGGCAGTAGCGCGGTGGCACCACCTGACCTCTGGCCGAACGCAGAAGTAAAACGCCGTAGCGCAGATGGTAGTGTGGGGTCTCCCCGTGCGAGAGTAGGGAACTGCCAGGCATCAAATTACAATGACCCCGGTCCATaa                                                                                                                        <  2:254414/149‑1 (MQ=14)

                     ttGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAgg                                                                                                                      >  1:1001117/1‑149 (MQ=255)

                      tGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑c                                                                                                                    <  1:763606/149‑1 (MQ=255)

                         cTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCgg                                                                                                                 >  2:1116443/1‑149 (MQ=255)

                         cTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCgg                                                                                                                 >  3:475752/1‑149 (MQ=255)

                         cTGGCGGCAGTAGCGCAGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCgg                                                                                                                 <  4:1284083/149‑1 (MQ=255)

                          tGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGgcatcaaataaaacgaaaggcccagtcttccgactga                                                                                                                 <  2:731841‑M2/149‑38 (MQ=255)

                          tGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCggg                                                                                                                <  3:1538110/149‑1 (MQ=255)

                            gcggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGgcatcaaataaaacgaaaggcccagtcttccgactgagc                                                                                                               >  3:1048234‑M2/1‑110 (MQ=255)

                            gcggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGgcatcaaataaaacgaaaggcccagtctttcgactgagc                                                                                                               >  4:1281897‑M2/1‑110 (MQ=255)

                             cggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGgcatcaaataaaacgaaaggcccagtctttcgactgagcc                                                                                                              >  1:680151‑M2/1‑109 (MQ=255)

                             cggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGtt                                                                                                             <  2:409652/149‑1 (MQ=255)

                              ggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGgcatcaaataaaacgaaaggcccagtcttccgactgagcct                                                                                                             >  3:134621‑M2/1‑108 (MQ=255)

                              ggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGgcatcaaataaaacgaaaggcccagtctttcgactgagcct                                                                                                             >  4:196889‑M2/1‑108 (MQ=255)

                              ggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGacatcaaataaaacaaaaggcccagtcttccgactgagcct                                                                                                             >  3:1289652‑M2/1‑108 (MQ=255)

                               gcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCg                                                                                                                                >  3:617459/1‑129 (MQ=255)

                               gcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCg                                                                                                                                <  4:617459/129‑1 (MQ=255)

                                cAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGG‑CCTTATGGACCGGGGttttt                                                                                                          <  3:1420972/149‑1 (MQ=14)

                                cAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGG‑CCTTATGGACCGGGGttttt                                                                                                          <  2:612815/149‑1 (MQ=14)

                                 aGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGgcatcaaataaaacgaaaggcccagtctttcgactgagcctttc                                                                                                          >  1:1570472‑M2/1‑105 (MQ=255)

                                 aGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGgcatcaaataaaacgaaaggcccagtctttcgactgagcctttc                                                                                                          >  3:1001482‑M2/1‑105 (MQ=255)

                                 aGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGtttttt                                                                                                         <  4:393155/149‑1 (MQ=255)

                                   tAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGgcatcaaataaaacgaaaggcccagtctttcgactgagcctttcgt                                                                                                        >  1:1528519‑M2/1‑103 (MQ=255)

                                         ggtggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCa                                                                                                 >  3:348752/1‑149 (MQ=255)

                                           tggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGgcatcaaataaaacgaaaggcccagtcttccgactgagcctttcgttttatttg                                                                                                >  3:181038‑M2/1‑95 (MQ=255)

                                            ggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAatt                                                                                              <  2:432820/149‑1 (MQ=255)

                                               cccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAattatt                                                                                           >  3:131318/1‑149 (MQ=255)

                                               cccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAattatt                                                                                           <  1:501737/149‑1 (MQ=255)

                                                      gACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCatga                                                                                    >  4:418884/1‑149 (MQ=255)

                                                      gACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCatga                                                                                    <  1:748844/149‑1 (MQ=255)

                                                       aCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCatgat                                                                                   <  3:1423546/149‑1 (MQ=255)

                                                          ccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAccc                                                                                                                                  >  1:1012082/1‑100 (MQ=40)

                                                          ccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAccc                                                                                                                                  <  2:1012082/100‑1 (MQ=40)

                                                          ccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGaa                                                                                >  3:247043/1‑149 (MQ=255)

                                                          ccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGaa                                                                                >  4:536262/1‑149 (MQ=255)

                                                           cATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAg                                                                               >  4:945041/1‑149 (MQ=255)

                                                           cATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAg                                                                               <  3:887001/149‑1 (MQ=255)

                                                           cATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAg                                                                               <  3:945041/149‑1 (MQ=255)

                                                           cATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAg                                                                               <  4:844441/149‑1 (MQ=255)

                                                           cATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAg                                                                               <  3:1149152/149‑1 (MQ=255)

                                                            aTGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAgg                                                                              <  3:1400366/149‑1 (MQ=255)

                                                              gCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGa                                                                            <  2:760914/149‑1 (MQ=255)

                                                                 gAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAAtc                                                                         >  1:346682/1‑149 (MQ=255)

                                                                  aaCTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAATAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGATGGGAAtct                                                                        >  2:1301517/1‑149 (MQ=255)

                                                                    cTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCa                                                                      <  3:47012/149‑1 (MQ=255)

                                                                     tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCAt                                                                     >  4:481328/1‑149 (MQ=255)

                                                                        gAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTc                                                                  <  2:483790/149‑1 (MQ=255)

                                                                        gAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTATGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTc                                                                  >  4:1364591/1‑149 (MQ=255)

                                                                              aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGgcatcaaataaaacgaaaggcccagtcttccgactgagcctt                                                                                                            >  3:425044‑M2/1‑60 (MQ=255)

                                                                              aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGtttttt                                                                                                         <  2:1483151/104‑1 (MQ=255)

                                                                                aCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaaaaa                                                                                                                                     <  2:756337/75‑1 (MQ=39)

                                                                                  gCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGacatcaaataaaacaaaaggcccagtcttccgactgagcc                                                                                                              <  1:1373162‑M2/96‑41 (MQ=255)

                                                                                    cGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTatat                                                      <  2:957557/149‑1 (MQ=255)

                                                                                     gTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATc                                                     >  2:1392243/1‑149 (MQ=255)

                                                                                           ccGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAAtt                                               >  4:1439513/1‑149 (MQ=255)

                                                                                                 gTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTcgtcgt                                         >  4:1332381/1‑149 (MQ=255)

                                                                                                 gTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTcgtcgt                                         >  4:89036/1‑149 (MQ=255)

                                                                                                   aGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCa                                                                                       <  2:940184/101‑1 (MQ=255)

                                                                                                    gtgtGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGacatcaaataaaacaaaa                                                                                                                                    >  3:1333657‑M2/1‑38 (MQ=255)

                                                                                                     tgtgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGacatcaaataaaacaaaaggcccagtcttccgactga                                                                                                                 >  1:334799‑M2/1‑37 (MQ=255)

                                                                                                      gtgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCa                                    >  1:685135/1‑149 (MQ=255)

                                                                                                       tgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCaa                                   >  1:477781/1‑149 (MQ=255)

                                                                                                       tgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCaa                                   >  1:171797/1‑149 (MQ=255)

                                                                                                         gggTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCa                                                                      >  4:752835/1‑112 (MQ=255)

                                                                                                         gggTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAAt                                 >  4:192120/1‑149 (MQ=255)

                                                                                                             ctcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACt                             <  3:89036/149‑1 (MQ=255)

                                                                                                              tcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCAt                                                                     <  2:168858/108‑1 (MQ=255)

                                                                                                              tcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAATTCTGTATATCCAAATTCGTCGTAATCAAATTACTg                            >  4:1064256/1‑149 (MQ=255)

                                                                                                                 ccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTc                         >  3:1074512/1‑149 (MQ=255)

                                                                                                                 ccATGCAAGAGTAGGGAACTGCCAGGTATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAATGGAATCTCATGTCAGTTCTGTATACCCAAATTCGTCGTAATCAAATTACTGTTc                         <  2:1581916/149‑1 (MQ=255)

                                                                                                                       gagaGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATc                   >  2:1068278/1‑149 (MQ=255)

                                                                                                                       gagaGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATc                   >  2:303614/1‑149 (MQ=255)

                                                                                                                        agagTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAg                                                                               <  1:161548/88‑1 (MQ=255)

                                                                                                                        agagTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCt                  <  1:1212881/149‑1 (MQ=255)

                                                                                                                             aGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGaaa             <  1:428924/149‑1 (MQ=255)

                                                                                                                               ggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGc           <  3:12896/149‑1 (MQ=255)

                                                                                                                               ggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGc           >  2:778943/1‑149 (MQ=255)

                                                                                                                               ggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGc           >  1:233259/1‑149 (MQ=255)

                                                                                                                               ggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGc           <  1:674543/149‑1 (MQ=255)

                                                                                                                                 aaCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTc                         <  4:408314/133‑1 (MQ=255)

                                                                                                                                    tGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACg      >  2:1222823/1‑149 (MQ=255)

                                                                                                                                       cAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGa   <  2:346682/149‑1 (MQ=255)

                                                                                                                                        aGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGaa  >  1:1437021/1‑149 (MQ=255)

                                                                                                                                        aGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGaa  >  3:385942/1‑149 (MQ=255)

                                                                                                                                        aGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGaa  >  1:987808/1‑149 (MQ=255)

AGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGG‑CCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAA  >  NC_000913/4213018‑4213302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.