| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,018,986 | A→T | 7.5% | intergenic (+49/+27) | matP → / ← ompA | Ter macrodomain organizer matS‑binding protein/outer membrane protein A (3a;II*;G;d) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,018,986 | 0 | A | T | 7.5% | 586.3 / 28.7 | 174 | intergenic (+49/+27) | matP/ompA | Ter macrodomain organizer matS‑binding protein/outer membrane protein A (3a;II*;G;d) |
| Reads supporting (aligned to +/- strand): ref base A (97/64); new base T (6/7); total (103/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
Only 100 of 178 total aligned reads displayed.
GATTGTTCAGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCA > NC_000913/1018838‑1019133 | gATTGTTCAGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCgcagca > 3:773513/1‑149 (MQ=255) gTTCAGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCgg < 1:1590793/149‑1 (MQ=255) ttaaGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCggg < 4:1088109/146‑1 (MQ=255) ttCAGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCTGCTGCggg < 1:937494/149‑1 (MQ=255) ttCAGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCggg > 4:75879/1‑149 (MQ=255) ttCAGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCggg < 3:1099345/149‑1 (MQ=255) ttCAGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCggg < 3:125285/149‑1 (MQ=255) aGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCTGCTGCGGGGtt < 2:1339637/149‑1 (MQ=255) gCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGttt < 3:1531989/149‑1 (MQ=255) gCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGttt > 2:349221/1‑149 (MQ=255) gCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGttt > 1:673229/1‑149 (MQ=255) gATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTc > 2:912436/1‑149 (MQ=255) gATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTc < 2:845143/149‑1 (MQ=255) ttGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCTGCTGCGGGGtttttttt < 3:1216860/149‑4 (MQ=255) ttGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTa > 1:1459704/1‑149 (MQ=255) ttGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACACCGCTGCTGCGGGGtttttttt < 1:969185/149‑4 (MQ=255) tGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTAc < 3:5820/149‑1 (MQ=255) gAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTAcc > 3:156314/1‑149 (MQ=255) aaGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCa < 3:13392/149‑1 (MQ=255) ggAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATATCTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACgaga > 4:1028137/1‑149 (MQ=255) ggAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACgaga > 2:407048/1‑149 (MQ=255) gAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGaa < 4:1190329/149‑1 (MQ=255) aaaaCAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAAc > 1:898196/1‑149 (MQ=255) cAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTaa < 3:1471398/149‑1 (MQ=255) cAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTaa < 4:295888/149‑1 (MQ=255) aaaGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAg > 3:913035/1‑149 (MQ=255) aaaGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAg > 2:1120296/1‑149 (MQ=255) aaaGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAg > 2:126958/1‑149 (MQ=255) aaGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGc > 4:1226705/1‑149 (MQ=255) agaAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTg > 3:1518485/1‑149 (MQ=255) gaAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGc < 1:349221/149‑1 (MQ=255) cgcgAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGa < 2:804313/149‑1 (MQ=255) aTAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTAc > 2:1292209/1‑149 (MQ=255) aaaTGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAAc < 2:357225/149‑1 (MQ=255) tGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCggg > 3:247180/1‑101 (MQ=255) tcttctCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGCAAAAAAAAACCCCGCAGCAGAGGGGTTTTTCTACCAGACGAGAACTTAAACCTGCGG‑CTGAGTTACAACGTCt > 4:636204/1‑149 (MQ=255) cttctCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCttt < 4:1522348/149‑1 (MQ=255) ttctCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGc < 1:832787/124‑1 (MQ=255) ttctCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGc > 2:832787/1‑124 (MQ=255) tctcTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGa < 2:1459704/149‑1 (MQ=255) tctGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTaa > 4:230165/1‑119 (MQ=255) tctGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATa > 4:1554662/1‑149 (MQ=255) tGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGt > 1:1334611/1‑131 (MQ=255) tGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATAcc > 3:704827/1‑149 (MQ=255) gAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCt < 1:1535607/149‑1 (MQ=255) aaGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCtt > 4:1525255/1‑149 (MQ=255) gCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTa > 2:632773/1‑149 (MQ=255) gCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTa > 2:944393/1‑149 (MQ=255) aGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAAc > 1:1347491/1‑149 (MQ=255) ggATCTGCAGGCATCGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTACGG‑CTGAGTTACAACGTCTTTGATACCTTTAACt > 4:860901/1‑149 (MQ=255) gCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCCCATCAGTGGGGTTTTTCAACTAACCAAGACCTTCAGCCGGGGC‑TTGTATTACAACGTCTTGGTAACTTTTAACTCCGact > 3:551057/1‑147 (MQ=255) cAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGAtct < 2:984454/149‑1 (MQ=255) aGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGAtctc > 1:287196/1‑149 (MQ=255) ggCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATctct > 4:370009/1‑149 (MQ=255) gCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTa > 1:651819/1‑149 (MQ=255) aTTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTc > 2:183635/1‑80 (MQ=255) aTTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTAcg > 1:113760/1‑149 (MQ=255) tGCTGGGTAAGGAATAACTGACGAAAGTCGGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTAcgcg < 3:1110662/149‑1 (MQ=255) gCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGcga > 3:219432/1‑149 (MQ=255) tAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGc < 3:448148/91‑1 (MQ=255) tAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTa > 1:750934/1‑138 (MQ=255) tAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTa < 2:750934/138‑1 (MQ=255) tAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑‑‑AAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCgg > 1:499604/1‑149 (MQ=255) aaGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGAt > 3:25102/1‑132 (MQ=255) aaGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGAt < 4:25102/132‑1 (MQ=255) ggAATAACTGACGCAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCgaa > 4:1435082/1‑147 (MQ=255) ggAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGa < 3:1270051/149‑1 (MQ=255) gAATAACTGACGAAAGTCAGTTCAGTTTACTAAAGGC‑AAAAAAAACGCTGCACGAGCGGGGCTTTTTGACCGGACGAG‑CTTTAAGCTCGCGGTGTGGGTTACTACTTCTTTGTTTCGTTTAACTCGGATCTCGACGCGGCGTTccctgg > 4:1152655/1‑145 (MQ=255) aaTAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGc > 3:1287734/1‑149 (MQ=255) tAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCa > 4:670735/1‑149 (MQ=255) aaCTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAg < 3:1146530/149‑1 (MQ=255) aaCTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTACGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAg < 3:860901/149‑1 (MQ=255) aCTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAgg > 1:261863/1‑149 (MQ=255) tGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCa < 2:261863/149‑1 (MQ=255) gTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCa < 1:229320/149‑1 (MQ=255) tCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAg > 4:680092/1‑149 (MQ=255) gTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTgc > 2:1553118/1‑149 (MQ=255) tACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCt < 4:1467367/149‑1 (MQ=255) cTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACTAGAACTTAAGCCTGCGA‑CTGGGTCACAACGTCTTTGATACCGTTAACTTCGATCTAGACGTGAAGATCGGGAGCGAGGCAGTCGATCAGTGCAGCACGCTGt > 2:515870/1‑149 (MQ=255) tAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGtt > 2:1044795/1‑149 (MQ=255) tAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGtt > 3:26646/1‑149 (MQ=255) tAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCCTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGtt > 4:814174/1‑149 (MQ=255) aaaGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGttt < 4:423245/149‑1 (MQ=255) aaGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTc < 4:462433/149‑1 (MQ=255) ggC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCAc < 4:1296645/149‑1 (MQ=255) ggC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCAc < 1:1044795/149‑1 (MQ=255) aaaaaaaaCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGtt < 3:370009/149‑1 (MQ=255) aaaaaaaCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTTAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTg > 1:1037541/1‑149 (MQ=255) aaaaaCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGAAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTc > 4:208970/1‑149 (MQ=255) aaaaCCCCGCTGCTGCGGGGTTTCTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGAt > 1:586193/1‑88 (MQ=39) aaaaCCCCGCTGCTGCGGGGTTTCTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGAt < 2:586193/88‑1 (MQ=39) aaaaCCCCGCTGCTGCGCGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTca > 1:456456/1‑149 (MQ=255) aaaCCCCGCTGCTGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTaa > 4:1176016/1‑80 (MQ=255) acccccGCTGCTGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGAGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTcacc > 2:1176573/3‑148 (MQ=255) aaCCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGCGCCGGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTcaca > 4:216052/1‑149 (MQ=255) ccccGCTGCTGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTTCAGCACGCTGTTTCACGTTGTCACAgg > 2:1567374/1‑149 (MQ=255) ccccGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAgg < 1:1267203/149‑1 (MQ=255) ccGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAGgtg > 1:845826/1‑149 (MQ=255) agcagcGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGc < 2:502183/149‑1 (MQ=255) cagcGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCa < 2:673229/149‑1 (MQ=255) | GATTGTTCAGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAACTGACGAAAGTCAGTTCAATTTACTAAAGGC‑AAAAAAAACCCCGCAGCAGCGGGGTTTTTCTACCAGACGAGAACTTAAGCCTGCGG‑CTGAGTTACAACGTCTTTGATACCTTTAACTTCGATCTCTACGCGACGATCCGGAGCCAGGCAGTCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCA > NC_000913/1018838‑1019133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |