| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,282,833 | G→A | 5.4% | intergenic (+32/+107) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,282,833 | 0 | G | A | 5.4% | 617.9 / 15.5 | 185 | intergenic (+32/+107) | rplY/yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| Reads supporting (aligned to +/- strand): ref base G (90/85); new base A (5/5); total (95/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01 | |||||||||||
Only 100 of 189 total aligned reads displayed.
TACAGCGAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTC > NC_000913/2282685‑2282975 | tACAGCGAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCcg > 4:350708/1‑149 (MQ=255) aGCGAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCcg‑gcg > 4:1071332/1‑149 (MQ=255) aGCGAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCcg‑gcg > 3:279056/1‑149 (MQ=255) aaGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGt < 3:1172597/149‑1 (MQ=255) aGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGtt > 4:359525/1‑149 (MQ=255) ttCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGtttt > 4:77339/1‑149 (MQ=255) tCTGACCATCGTTGTTGACGGTAAAGACATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGttttt < 3:438239/149‑1 (MQ=255) cTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGtttttt < 2:1083608/149‑1 (MQ=255) cTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGtttttt < 1:1207668/149‑1 (MQ=255) cTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGtttttt < 3:703682/149‑1 (MQ=255) aCCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTa > 3:1098878/1‑149 (MQ=255) ccATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTAt > 1:1393869/1‑149 (MQ=255) ccATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTAt < 3:82249/149‑1 (MQ=255) cATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATc > 3:1489661/1‑149 (MQ=255) cATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATc > 4:161211/1‑149 (MQ=255) aTCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCt > 1:1467121/1‑149 (MQ=255) aTCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCt < 2:1543824/149‑1 (MQ=255) aTCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCt > 1:669413/1‑149 (MQ=255) ttgACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGAtt > 1:532853/1‑149 (MQ=255) gACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTAt > 2:660690/1‑149 (MQ=255) cGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGc < 3:626815/149‑1 (MQ=255) gTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGa > 3:569131/1‑141 (MQ=255) gTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGa < 4:569131/141‑1 (MQ=255) gTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCt < 1:440313/149‑1 (MQ=255) aaaGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGa < 3:77339/149‑1 (MQ=255) aGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGAtt > 2:1283130/1‑149 (MQ=255) aGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGAtt > 3:1031843/1‑149 (MQ=255) aGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGAtt > 4:1446435/1‑149 (MQ=255) aGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGAtt > 1:1415778/1‑149 (MQ=255) aaTCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACg < 2:1093654/149‑1 (MQ=255) aTCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACgg > 2:240609/1‑149 (MQ=255) aTCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACgc > 1:582399/1‑148 (MQ=255) tCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAACCCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCCGGA‑GCGGGGttttt > 4:907173/1‑120 (MQ=255) tCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCTACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGt < 1:1301851/149‑1 (MQ=255) tCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCCACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCCGGA‑GCGGGGttttt < 3:907173/120‑1 (MQ=255) aaaGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTAt > 4:187337/1‑149 (MQ=255) aaGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTAtt < 4:1239069/149‑1 (MQ=255) ttAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGa > 2:339519/1‑136 (MQ=255) ttAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGa < 1:339519/136‑1 (MQ=255) ttAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCt > 3:1414789/1‑149 (MQ=255) aaaGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAt > 4:353942/1‑149 (MQ=255) aaaGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAt > 3:1061313/1‑149 (MQ=255) cAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTg < 2:1393869/149‑1 (MQ=255) aGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTAc > 1:1445834/1‑131 (MQ=255) aGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTAc < 2:1445834/131‑1 (MQ=255) aGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGc > 3:1268935/1‑149 (MQ=255) aGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGCAAAAAACCCCGC‑CGGAGCGGGGttttttacaa > 2:958666/1‑106 (MQ=37) ggACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGTCTGATTACGGTATTGCTATTTTTTGCa < 3:44389/149‑1 (MQ=255) gACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAg < 3:359525/149‑1 (MQ=255) gACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAg > 2:590991/1‑149 (MQ=255) tACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCa < 4:438980/149‑1 (MQ=255) aCAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAg > 4:973769/1‑149 (MQ=255) aCAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAg > 2:208035/1‑149 (MQ=255) tCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATGGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GGGGGGTTTTTTGTATCTGCAGATTATGCGTGATTACGGTACTGCTATTTTTTGCAGGCCAGATAAgg < 3:975353/149‑1 (MQ=255) ccGTACAAACCGAAGCTGCAGCACCTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGtt > 4:1137622/1‑149 (MQ=255) ccGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGtt > 1:1115291/1‑149 (MQ=255) aaaCCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGAtt < 2:395094/96‑1 (MQ=255) aaaCCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGAtt > 1:395094/1‑96 (MQ=255) aCCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccgc > 3:461930/1‑149 (MQ=255) aaGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCt < 1:597385/149‑1 (MQ=255) tGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCa < 4:1268935/149‑1 (MQ=255) gcaCATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAtt > 2:1133515/1‑106 (MQ=255) gcaCATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa > 1:1103924/1‑149 (MQ=255) caTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGaa < 2:1467121/149‑1 (MQ=255) aTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac > 1:1226670/1‑149 (MQ=255) aTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac < 3:166320/149‑1 (MQ=255) aTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac > 2:78117/1‑149 (MQ=255) aTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac > 2:299898/1‑149 (MQ=255) aTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTCTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac > 1:86705/1‑149 (MQ=255) cTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaaa < 2:52427/149‑1 (MQ=255) ttcgttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaaaa > 4:273409/1‑149 (MQ=255) ttcgttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaaaa < 1:658642/149‑1 (MQ=255) ttcgttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaaaa > 4:1228960/1‑149 (MQ=255) cgttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAAcc < 4:688990/149‑1 (MQ=255) ttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGa < 1:1011621/149‑1 (MQ=255) gcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAt < 4:467422/149‑1 (MQ=255) cTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAtt < 1:1449925/149‑1 (MQ=255) tAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc < 3:1437934/149‑1 (MQ=255) aaTTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGaa > 2:596343/1‑129 (MQ=255) aTTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGAt < 2:884235/97‑1 (MQ=255) aTTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGAt > 1:884235/1‑97 (MQ=255) ttGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgc > 3:400953/1‑149 (MQ=255) tGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGa > 3:339059/1‑149 (MQ=255) gAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCt < 4:294503/73‑1 (MQ=255) gAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGAc > 4:1060375/1‑149 (MQ=255) gTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCgg < 2:442970/149‑1 (MQ=255) tAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCt > 2:475558/1‑149 (MQ=255) aaaaaaCCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTg < 4:1098878/149‑1 (MQ=255) aaaaaCCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCa > 1:483198/1‑76 (MQ=255) aaaaaCCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCa > 4:1193078/1‑76 (MQ=255) aaaaaCCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCa < 3:1193078/76‑1 (MQ=255) aaaaCCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGgc < 2:1428167/143‑1 (MQ=255) aaaaCCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGgc > 1:1428167/1‑143 (MQ=255) aaaCCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCaa < 4:247953/149‑1 (MQ=255) cccGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTgg > 1:527627/1‑149 (MQ=255) cccGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTgg > 1:155959/1‑149 (MQ=255) cccGCTCCG‑GCGGGG‑TTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGt > 3:861774/1‑149 (MQ=255) ccGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGt > 1:174473/1‑149 (MQ=255) cGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTc < 2:582399/149‑1 (MQ=255) cGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTc < 1:811345/149‑1 (MQ=255) | TACAGCGAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCG‑GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTC > NC_000913/2282685‑2282975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |