| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,900,327 | A→C | 7.9% | intergenic (‑54/‑265) | ygcW ← / → yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,900,327 | 0 | A | C | 7.9% | 540.1 / 36.2 | 164 | intergenic (‑54/‑265) | ygcW/yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (77/74); new base C (8/5); total (85/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.89e-01 | |||||||||||
Only 100 of 170 total aligned reads displayed.
TGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACA > NC_000913/2900179‑2900475 | tGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCga > 3:306249/1‑149 (MQ=255) cTAAAACCCTATTCCCACCCGTAACAATTTGGGTTTTAACTTTCAGGGAG‑AAAAAATCCATTTAGAACGCA‑TTTAAGGAATCGATTTAAATAGGTAGCCCCCATTTCCG‑TAAAGCAAAAAAAAAAGAAAGGTAACTTCCCCCGCGagag < 2:38086/149‑1 (MQ=255) aaaCCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGa > 2:420878/1‑149 (MQ=255) aaCCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGaa < 1:1174459/149‑1 (MQ=255) aCCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAg > 4:169611/1‑149 (MQ=255) aCCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAg > 3:1427716/1‑149 (MQ=255) ccGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCTCTCGCGGGGGAAGt < 3:1211834/149‑1 (MQ=255) ccGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGt > 3:400514/1‑149 (MQ=255) cGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGtt > 3:176720/1‑149 (MQ=255) cGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGtt > 4:1339738/1‑149 (MQ=255) cTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCTCTCGCGGGGGAAGTTAc < 2:230217/149‑1 (MQ=255) cTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTAc > 4:822840/1‑149 (MQ=255) aTTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCTCTCGCGGGGGAAGTTACCt < 1:1156950/149‑1 (MQ=255) tCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAGATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCttt < 3:1263647/149‑1 (MQ=255) tCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCttt < 3:1323803/149‑1 (MQ=255) ccGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCAt > 4:1467900/1‑149 (MQ=255) gTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTAt < 3:277900/149‑1 (MQ=255) cAATTTCGGTTTTACCTTTCAGGGAA‑AAAAAATCCCTTGAGAACGCA‑TTGAGAAAATCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATctct < 4:400514/149‑1 (MQ=255) cAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATctct < 2:1562747/149‑1 (MQ=255) aaTTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTg > 1:1497238/1‑149 (MQ=255) ttGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAATTTACCTTTCTCATTATCTCTGGt > 1:840592/1‑149 (MQ=255) ttGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGt > 3:320790/1‑149 (MQ=255) cgggTTTTA‑CTTTTAGGGAGAAAAAAATCCA‑TGGGAAAGCATTTGAGGGA‑TCGAATGACATAGTTTGCCCCCATTTTCGTTAGGGA‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTaa < 3:134075/147‑1 (MQ=255) tttACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGga < 1:49329/149‑1 (MQ=255) aCCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGAt > 4:631847/1‑149 (MQ=255) cTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATaa > 1:693110/1‑149 (MQ=255) tttCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCCCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCAt < 1:1485681/126‑1 (MQ=255) aGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAAttttt < 4:1557/149‑1 (MQ=255) gggAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCTCTCGCGGGGGAAGTTAc < 2:266310/112‑1 (MQ=38) gggAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCTCTCGCGGGGGAAGTTAc > 1:266310/1‑112 (MQ=38) gggAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa < 4:1361383/149‑1 (MQ=255) ggaaaaaaaaaCCCATTAAGAACGAT‑TTGAGAAATTCGTTGAAAATAGTTAGCTCCAATTTCCG‑AAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa < 1:1059418/144‑1 (MQ=255) ggAA‑AAAAAATCCAATGAGAACGCA‑TTGAGAGATTCGAATGGCATAGTTAGCTCCAATTTCCG‑TAAGGCAAAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa < 1:622154/149‑1 (MQ=255) aaaTCCATTGAGAGCACA‑TTGGGAGATTCGATGGACATAATTAGCTCCAATTTCCG‑TAGGGC‑AAAAGAAAAGAAAGGTAACTTCCCCCAAGAGAGTGAAGTTACCTTTCTCATTATCTCTGTTAACTGGAGATAATTTTTGGCATAAgg < 2:675594/149‑1 (MQ=255) aaaTCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAgg < 4:176720/149‑1 (MQ=255) aaaTCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAgg > 2:1094007/1‑149 (MQ=255) tCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAGAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa < 3:886005/138‑1 (MQ=255) tCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGGTATCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa > 4:886005/1‑138 (MQ=255) ccATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTTCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa < 1:278461/137‑1 (MQ=255) ccATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa > 2:278461/1‑137 (MQ=255) cATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATa > 2:1320714/1‑149 (MQ=255) cATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATa > 1:1557987/1‑149 (MQ=255) aTTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGagag < 3:949658/89‑1 (MQ=255) aTTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGagag > 4:949658/1‑89 (MQ=255) gagaACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAAc < 3:744358/117‑1 (MQ=255) gagaACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAAc > 4:744358/1‑117 (MQ=255) gagaACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTg > 1:337255/1‑149 (MQ=255) a‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAAtgtg < 4:1119429/149‑1 (MQ=255) a‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAAtgtg > 1:943955/1‑149 (MQ=255) ttGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGa < 1:80602/149‑1 (MQ=255) tGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGAt < 4:289641/149‑1 (MQ=255) gagagaTTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATc < 3:982851/149‑1 (MQ=255) gaTTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTaa < 1:1094007/149‑1 (MQ=255) aTTCGATTGACATAGTTAACTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAAt > 4:65817/1‑149 (MQ=255) ttCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATc > 4:322999/1‑143 (MQ=255) gATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGaa > 2:907112/1‑70 (MQ=255) gATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGaa < 1:907112/70‑1 (MQ=255) ttGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAgt < 3:822840/149‑1 (MQ=255) gACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAgtgt < 4:1058095/149‑1 (MQ=255) aCATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCAtt < 3:149917/80‑1 (MQ=255) aCATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCAtt > 4:149917/1‑80 (MQ=255) cATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGa < 2:1167674/149‑1 (MQ=255) aTAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGat < 2:568155/149‑1 (MQ=255) gTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa > 3:1529163/1‑102 (MQ=255) tCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTAtt < 3:1155629/149‑1 (MQ=255) tCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTAtt > 1:391920/1‑149 (MQ=255) cAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGATAATGTGATCGTAATCACAGTGTGATATTCGTATTGt > 3:1021464/1‑149 (MQ=255) aTTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCa > 3:1357755/1‑149 (MQ=255) ttCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCaaa < 4:306249/149‑1 (MQ=255) cG‑TAAGGC‑AAAAAAAAAGAAAGGTAGCTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCaa < 1:793451/145‑1 (MQ=255) cG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAAtgtggt > 2:1086879/1‑112 (MQ=255) cG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCaa > 2:793451/1‑145 (MQ=255) cG‑TAAGGC‑‑AAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAaataat > 4:100305/1‑149 (MQ=255) g‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAaataat > 4:671179/1‑149 (MQ=255) g‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAaataat < 2:163051/149‑1 (MQ=255) g‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAaataat > 3:327250/1‑149 (MQ=255) aaaaaaaaaGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAg < 3:678760/117‑1 (MQ=255) aaaaaaaaaGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAg > 4:678760/1‑117 (MQ=255) aaaaaaaaGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTaaaaa < 3:631847/149‑1 (MQ=255) aaaaaaaaGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTaaaaa < 2:1553227/149‑1 (MQ=255) aaaaaaaGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAg < 2:607049/149‑1 (MQ=255) aaaaaGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATCACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAACAATTTTAAAAAGCa > 1:1278371/1‑149 (MQ=255) aaaaaGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCa < 1:599018/149‑1 (MQ=255) aagaaagGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa > 3:660652/1‑72 (MQ=255) agGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTg < 4:448006/149‑1 (MQ=255) agGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTg > 4:509748/1‑149 (MQ=255) gTAACTTCCCTCTCGCGGGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGAt > 2:955504/1‑149 (MQ=255) gTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGAt > 3:1260577/1‑149 (MQ=255) tAACTTCCCTCTCGCGGGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGAtt > 4:1139793/1‑149 (MQ=255) tAACTTCCCTCTCGCGGGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGAtt > 1:94094/1‑149 (MQ=255) tAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGAtt > 3:609707/1‑149 (MQ=255) cTTCCCTCTCGCGGGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGa < 4:851009/87‑1 (MQ=37) ttCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTaa > 3:781241/1‑81 (MQ=255) ttCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGtgtg < 2:61895/102‑1 (MQ=255) ttCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGtgtg > 1:61895/1‑102 (MQ=255) ttCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTActc > 2:467719/1‑149 (MQ=255) cgcgAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGc > 2:1073154/1‑56 (MQ=255) cgcgAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGc < 1:1073154/56‑1 (MQ=255) cgcgAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTcacac < 1:467719/149‑1 (MQ=255) agagGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACacaaca < 2:817952/149‑1 (MQ=255) | TGGCCTAAACCGCTATTCCCACCGGTAACAATTGCGGTTTTACCTTTCAGGGAG‑AAAAAATCCATTGAGAACGCA‑TTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCG‑TAAGGC‑AAAAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCTCACACAACA > NC_000913/2900179‑2900475 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |