Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,291,512 G→A 6.2% M1M (GTG→ATG) †‡ nrfE → heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,291,5120GA 6.2% 472.0 / 14.6 144M1M (GTG→ATG) †‡nrfEheme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE
Reads supporting (aligned to +/- strand):  ref base G (70/65);  new base A (5/4);  total (75/69)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.61e-01

Only 100 of 148 total aligned reads displayed.

GCCAGTCTGGTCGGCGTGTTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCTCATCAGCGATTTC  >  NC_000913/4291364‑4291658
                                                                                                                                                     |                                                                                                                                                  
gCCAGTCTGGTCGGCGTGTTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACg                                                                                                                                                    >  1:198671/1‑149 (MQ=255)
    gTCTGGTCGGCGTGTTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGtt                                                                                                                                                <  1:272306/149‑1 (MQ=255)
         gTCGGCGTGTTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACACGTTGAccc                                                                                                                                           <  3:1000782/149‑1 (MQ=255)
            ggCGTGTTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACACGTTGACCCCga                                                                                                                                        <  2:1218583/149‑2 (MQ=255)
             gCGTGTTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTCAACGGGGTCAACACGTTGACCCCga                                                                                                                                        <  2:1275054/149‑2 (MQ=255)
             gCGTGTTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGtt                                                                                                                                       <  3:1488969/149‑1 (MQ=255)
               gtgtTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGa                                                                                                                                     <  1:818627/149‑1 (MQ=255)
                tgtTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGAc                                                                                                                                    >  4:1542658/1‑149 (MQ=255)
                 gtTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACg                                                                                                                                   >  3:788592/1‑149 (MQ=255)
                 gtTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACg                                                                                                                                   >  1:176505/1‑149 (MQ=255)
                  ttGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAGGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACgg                                                                                                                                  >  4:1138293/1‑149 (MQ=255)
                  ttGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACgg                                                                                                                                  >  3:676835/1‑149 (MQ=255)
                  ttGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGCTGCTGTTAGGTC‑TCGGGGTCGACGTGTTGACCCCGTTGACgg                                                                                                                                  >  1:537174/1‑149 (MQ=255)
                         tgcGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTcgc                                                                                                                           <  4:536679/149‑1 (MQ=255)
                           cgcTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCgg                                                                                                                         <  2:470166/149‑1 (MQ=255)
                              tttttCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAg                                                                                                                      >  3:65390/1‑149 (MQ=255)
                              tttttCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAg                                                                                                                      >  3:524574/1‑149 (MQ=255)
                                 ttCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGc                                                                                                                   <  4:1075987/149‑1 (MQ=255)
                                  tCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACACGTTGACCCCga                                                                                                                                        <  4:193978/127‑2 (MQ=255)
                                    aTTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGt                                                                                                                >  3:378322/1‑149 (MQ=255)
                                    aTTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGt                                                                                                                >  2:655992/1‑149 (MQ=255)
                                     ttCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGCACGTATTCCTTCCTGAATTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGTGAGTGCGGtt                                                                                                               >  4:77469/1‑149 (MQ=255)
                                       ctctACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTTTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCgg                                                                                                                 <  2:1316514/145‑1 (MQ=255)
                                       ctctACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTTTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCgg                                                                                                                 >  1:1316514/1‑145 (MQ=255)
                                        tctACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGAccc                                                                                                                                           >  1:1123987/1‑118 (MQ=255)
                                        tctACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGAccc                                                                                                                                           <  2:1123987/118‑1 (MQ=255)
                                         ctACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTgcgc                                                                                                           <  4:186784/149‑1 (MQ=255)
                                          tACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCt                                                                                                          >  3:791805/1‑149 (MQ=255)
                                             gCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGc                                                                                                       <  1:655992/149‑1 (MQ=255)
                                                      ttGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACgt                                                                                                                                                   >  3:509588/1‑96 (MQ=255)
                                                      ttGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACgt                                                                                                                                                   <  4:509588/96‑1 (MQ=255)
                                                         aCGGTAGCGTAAGCCAGAAAACAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTTACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGc                                                                                           <  1:1198958/149‑1 (MQ=255)
                                                               gCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCAGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGTGGTTGCGCTGGCCTGCCATGATGCGACTCa                                                                                     >  4:1184703/1‑149 (MQ=255)
                                                               gCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCAGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGTGGTTGCGCTGGCCTGCCATGATGCGACTCa                                                                                     <  3:1184703/149‑1 (MQ=255)
                                                                cGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCAc                                                                                    <  4:384656/149‑1 (MQ=255)
                                                                     gCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGAc                                                                                                                                             <  3:232210/87‑1 (MQ=255)
                                                                     gCCAGAAAACAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCa                                                                               <  3:1323488/149‑1 (MQ=255)
                                                                      ccAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCAt                                                                              >  4:1235061/1‑149 (MQ=255)
                                                                       cAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCGTGCCATGATGCGACTCACTTGCATc                                                                             >  3:1028014/1‑149 (MQ=255)
                                                                          aaaaGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGt                                                                                                                >  4:1439046/1‑111 (MQ=255)
                                                                          aaaaGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGt                                                                                                                <  3:1439046/111‑1 (MQ=255)
                                                                             agagGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCatgat                                                                                             >  3:1236697/1‑127 (MQ=255)
                                                                                 gtggtTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTgg                                                                   <  4:861834/149‑1 (MQ=255)
                                                                                 gtggtTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTgg                                                                   >  4:730925/1‑149 (MQ=255)
                                                                                  tggtTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGgc                                                                  <  2:814112/149‑1 (MQ=255)
                                                                                   ggtTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGgcg                                                                 >  4:114725/1‑149 (MQ=255)
                                                                                   ggtTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGgcg                                                                 <  4:676835/149‑1 (MQ=255)
                                                                                         tGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTc                                                           >  1:1505148/1‑149 (MQ=255)
                                                                                          ggACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGGCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTcg                                                          <  2:1555349/149‑1 (MQ=255)
                                                                                           gACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTcgc                                                         <  1:1490907/149‑1 (MQ=255)
                                                                                               tATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTc                                                     >  3:1471634/1‑149 (MQ=255)
                                                                                                 ttccttccTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCct                                                   >  3:1384817/1‑149 (MQ=255)
                                                                                                  tccttcctGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCctg                                                  >  4:1532144/1‑149 (MQ=255)
                                                                                                    cttcttGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACtt                                                                                  >  1:1355225/1‑115 (MQ=255)
                                                                                                    cttcctGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACtt                                                                                  <  2:1355225/115‑1 (MQ=255)
                                                                                                    cttcctGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCa                                                                               <  4:1440322/118‑1 (MQ=255)
                                                                                                    cttcctGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCa                                                                               >  3:1440322/1‑118 (MQ=255)
                                                                                                    cttcctGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCctgct                                                >  4:814053/1‑149 (MQ=255)
                                                                                                    cttcctGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCctgct                                                >  3:22528/1‑149 (MQ=255)
                                                                                                         tGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCg                                           >  2:534341/1‑149 (MQ=255)
                                                                                                             gTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCtt                                       >  3:398766/1‑149 (MQ=255)
                                                                                                              tCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCttt                                      >  4:690717/1‑149 (MQ=255)
                                                                                                              tCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCttt                                      >  2:1115223/1‑149 (MQ=255)
                                                                                                               cGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTg                                     <  2:279369/149‑1 (MQ=255)
                                                                                                                 gTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGc                                   >  4:310623/1‑149 (MQ=255)
                                                                                                                     tCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTAc                               <  4:13059/149‑1 (MQ=255)
                                                                                                                      cTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACt                              <  3:690717/149‑1 (MQ=255)
                                                                                                                        ggCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGa                            <  1:1345980/149‑1 (MQ=255)
                                                                                                                         gCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGAc                           <  4:141606/149‑1 (MQ=255)
                                                                                                                         gCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGAc                           <  4:378322/149‑1 (MQ=255)
                                                                                                                           gttgttgttAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGt                         >  4:178512/1‑149 (MQ=255)
                                                                                                                           gttgttgttAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGt                         >  1:1278409/1‑149 (MQ=255)
                                                                                                                             tgttgttAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTAt                       <  2:1804/149‑1 (MQ=255)
                                                                                                                              gttgttAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTAtt                      >  3:1170261/1‑149 (MQ=255)
                                                                                                                               ttgttAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTg                     <  4:1384817/149‑1 (MQ=255)
                                                                                                                               ttgttAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTg                     >  1:1203224/1‑149 (MQ=255)
                                                                                                                                tgttAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGt                    <  3:730925/149‑1 (MQ=255)
                                                                                                                                 gttAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGtt                   <  4:65131/149‑1 (MQ=255)
                                                                                                                                 gttAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGtt                   >  4:1040258/1‑149 (MQ=255)
                                                                                                                                 gttAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGtt                   <  4:22528/149‑1 (MQ=255)
                                                                                                                                  ttAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGttt                  >  2:307258/1‑149 (MQ=255)
                                                                                                                                   tAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGtttt                 <  3:77469/149‑1 (MQ=255)
                                                                                                                                   tAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGtttt                 <  3:583572/149‑1 (MQ=255)
                                                                                                                                   tAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGtttt                 <  3:114725/149‑1 (MQ=255)
                                                                                                                                    aaGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTtc                <  2:23221/149‑1 (MQ=255)
                                                                                                                                      gtcaacGGGGTCAACACGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTtct               >  1:51699/6‑149 (MQ=255)
                                                                                                                                       tc‑tcGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCtca             >  1:329449/1‑149 (MQ=255)
                                                                                                                                       tc‑tcGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCtca             >  4:484117/1‑149 (MQ=255)
                                                                                                                                        c‑tcGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCtcat            <  3:178512/149‑1 (MQ=255)
                                                                                                                                          tcgagctCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCtcatc           >  4:817749/7‑149 (MQ=255)
                                                                                                                                          tcGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCtcatc           >  3:249238/1‑149 (MQ=255)
                                                                                                                                          acGGGGTCAACACGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCtcatc           >  4:24782/2‑149 (MQ=255)
                                                                                                                                            ggggTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCTCATCAg         <  2:316632/149‑1 (MQ=255)
                                                                                                                                             gggTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCTCATCAGc        <  2:157913/149‑1 (MQ=255)
                                                                                                                                               gTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCTCATCAGCGa      <  3:190684/149‑1 (MQ=255)
                                                                                                                                                tCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGTGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCTCATCAGCGAt     <  3:852668/149‑1 (MQ=255)
                                                                                                                                                  aaCGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGt                    >  2:539568/1‑132 (MQ=255)
                                                                                                                                                   aCGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCTCATCAGCGATTtc  >  2:939449/1‑149 (MQ=255)
                                                                                                                                                    cGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTtc                <  3:93174/134‑1 (MQ=255)
                                                                                                                                                    cGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTtc                >  4:93174/1‑134 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
GCCAGTCTGGTCGGCGTGTTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAAGCCAGAAAAGAGGTGGTTTCTGGACGTATTCCTTCCTGAAGTCGGTTTTCTGGCGTTGTTGTTAAGTC‑TCGGGGTCAACGTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCTCATCAGCGATTTC  >  NC_000913/4291364‑4291658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑