| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,295,956 | C→A | 5.4% | intergenic (+162/+480) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,295,956 | 0 | C | A | 5.4% | 459.7 / 14.3 | 149 | intergenic (+162/+480) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base C (64/77); new base A (4/4); total (68/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.50e-01 | |||||||||||
Only 100 of 152 total aligned reads displayed.
GGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGA > NC_000913/4295808‑4296103 | gATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGa > 1:484844/1‑149 (MQ=255) tatCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACg > 2:1515466/1‑149 (MQ=255) atCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTATCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGc > 3:965567/1‑149 (MQ=255) atCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGc > 1:1019597/1‑149 (MQ=255) cACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTa > 1:1500329/1‑149 (MQ=255) cACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTa < 4:345999/149‑1 (MQ=255) cACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTa > 1:76568/1‑149 (MQ=255) aCCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTaa > 2:48377/1‑149 (MQ=255) cccGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGAAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGCCGC‑TTAAc < 4:136959/149‑1 (MQ=255) gCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGt < 1:1515466/149‑1 (MQ=40) cAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTc < 3:984695/149‑1 (MQ=39) aTGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCtt < 4:558440/149‑1 (MQ=38) tgtgtgAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTa > 3:319562/1‑149 (MQ=37) taagataggcctgataagacgcggcaagcgtcgcagcaggcattgaagtcggatgcggcgtaaacgccttagccgaactacaaaatcacgccaccccaggctattgcgctgtctggcgtagGCCTGATGCGACGC‑TTAACGCGTCTTAt < 2:239477‑M2/28‑1 (MQ=255) tgtgAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGc < 3:274619/129‑1 (MQ=35) tgtgAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGc > 4:274619/1‑129 (MQ=35) ggcgtaggcctgataagacgcggcaagcgtcgcatcaggcgttgatgtcggatgcggcgtaaacgccttatccgacctacaaaatcacgctaaatcaggctattgcgctgtctggcgtagGCCTGATGCGACGC‑TTAACGCGTCTTATc < 2:544649‑M2/29‑1 (MQ=255) gtgAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCa < 2:1102148/149‑1 (MQ=34) tgAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAg > 1:1339276/1‑149 (MQ=33) cgtaggcctgataagacgcgttaagcgtcgcatcaggcgttgatgtcggatgcggcataaacgccttatccgacctacaaaatcacgctaaatcaggctattgcgctgtctggcgtagGCCTGATAAGACGC‑TTGCCGCGTCTTATCAg < 2:355555‑M2/31‑1 (MQ=255) cgtaggcctgataagacgcggcaagcgtcgcatcaggcgttgatgtcggatgcggcgtaaacgccttatccgacctacaaaatcacgctaaatcaggctattgcgctgtctggcgtagGCCTGATGCGACGC‑TTAACGCGTCTTATCAg < 1:251007‑M2/31‑1 (MQ=255) gAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAgg > 1:1360439/1‑149 (MQ=32) aaTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGc < 1:917855/149‑1 (MQ=32) ggatgcggcgtaaacgccttatccgacctacaaaatcacgctaaatcaggctattgcgctgtctggcgtagGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGc > 3:1036559‑M2/72‑104 (MQ=255) cttatccgacctacaaaatcacgctaaatcaggctattgcgctgtctggcgtacGCCTGATGCGACGC‑TTGCCGCGTCTTATCAGGc < 1:1273253‑M2/33‑1 (MQ=255) cttatccgacctacaaaatcacgctaaatcaggctattgcgctgtctggcgtacGCCTGATGCGACGC‑TTGCCGCGTCTTATCAGGc > 2:1273253‑M2/55‑87 (MQ=255) ttAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAcg > 2:1159363/1‑149 (MQ=11) tAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAcgc < 3:256116/149‑1 (MQ=31) aGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAcgcc < 2:533020/149‑1 (MQ=32) aGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAcgcc > 4:405974/1‑149 (MQ=32) tccgacctacaaaatcacgctaaatcaggctattgcgctgtctggcgtagGCCTGATAAGACGC‑TTAACGCGTc > 2:822949‑M2/51‑74 (MQ=255) gCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAcgccg < 1:1419509/149‑1 (MQ=32) cGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAcgccgc > 2:1561099/1‑149 (MQ=32) cGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAcgccgc > 4:187715/1‑149 (MQ=32) gTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCa < 2:1019597/149‑1 (MQ=32) tGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCAt > 3:854025/1‑149 (MQ=32) tGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCAt > 4:1185722/1‑149 (MQ=32) tttGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGa < 1:388829/149‑1 (MQ=32) tttGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGa > 4:753208/1‑149 (MQ=32) ggTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCaa < 1:1291685/149‑1 (MQ=32) ggTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCaa > 2:1077334/1‑149 (MQ=32) gTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCaat < 3:299410/149‑2 (MQ=17) gTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAc < 4:319562/149‑1 (MQ=32) gTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAc < 2:1228025/149‑1 (MQ=32) gTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAc > 2:92158/1‑149 (MQ=32) gTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGAATAAGGCGTTTACGCCGCATCCGACATCaat < 4:961557/149‑2 (MQ=17) tCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGAAAAGGCGTTTACGCCGCATCCGACATCAACg > 1:1030795/1‑149 (MQ=17) cGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGc < 4:950207/149‑1 (MQ=17) cGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGc < 3:899946/149‑1 (MQ=17) cGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGc < 3:1208877/149‑1 (MQ=32) gATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCt < 2:1399153/149‑1 (MQ=17) gATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCt < 1:1077334/149‑1 (MQ=17) gATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCt > 4:1143308/1‑149 (MQ=17) aaGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGAt < 3:943687/149‑1 (MQ=17) aGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATg > 1:1435554/1‑149 (MQ=17) ggCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAc > 3:1033381/1‑140 (MQ=32) ggCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAc < 4:1033381/140‑1 (MQ=33) ggCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGc < 4:84554/149‑1 (MQ=32) cGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGa < 1:327730/149‑1 (MQ=17) gTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGAc > 1:789624/1‑149 (MQ=17) tttATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATcc < 3:595801/127‑1 (MQ=33) ttATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGc < 3:1542928/149‑1 (MQ=17) ttATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGc < 4:1317213/149‑1 (MQ=17) aTGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCtt < 1:1115551/149‑1 (MQ=17) gCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGc < 3:408131/149‑1 (MQ=18) gCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGc < 3:671613/149‑1 (MQ=34) cGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAcgc < 3:286224/113‑1 (MQ=31) cGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCaa > 4:1092706/1‑128 (MQ=32) cGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCaa < 3:1092706/128‑1 (MQ=33) aTCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGt < 3:405974/149‑1 (MQ=21) aTCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGt < 1:623541/149‑1 (MQ=38) aTCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGt < 4:1171016/149‑1 (MQ=38) tgtctggcgtagGCCTGATAAGACGCGTTAA‑GCGTCGCATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGt > 4:523141‑M2/13‑148 (MQ=255) tCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTc > 4:286948/1‑149 (MQ=37) tCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTc < 3:586632/149‑1 (MQ=37) cGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCaat > 4:1035092/1‑122 (MQ=17) cGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCtt > 3:1205932/1‑149 (MQ=25) cGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCtt < 3:453182/149‑1 (MQ=37) gACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTa > 4:329000/1‑149 (MQ=21) gACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTa > 3:283099/1‑149 (MQ=38) aCATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGGCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTAt > 2:333007/1‑149 (MQ=25) cATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATc < 4:291289/149‑1 (MQ=38) aTCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAcgcc < 4:350910/104‑1 (MQ=32) aTCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAATTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCa > 4:906213/1‑149 (MQ=21) tCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCGATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAg < 3:1353998/149‑1 (MQ=37) tCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATcc > 2:1388239/1‑109 (MQ=32) gtagGCCTGATAAGACGCGTTAA‑GCGTCGCATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGc < 3:48283‑M2/122‑1 (MQ=255) gtagGCCTGATAAGACGC‑GTTAAGCGTCGCATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGc > 4:48283‑M2/5‑126 (MQ=255) aaCGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACa < 4:856110/111‑1 (MQ=33) aaCGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg < 4:1444307/148‑1 (MQ=21) aaCGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg > 3:1444307/1‑148 (MQ=21) aaCGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc < 4:1317409/149‑1 (MQ=37) aaCGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc > 2:738725/1‑149 (MQ=38) aCGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAAACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc > 2:1566973/1‑149 (MQ=25) GCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGcc > 2:1474485‑M2/1‑132 (MQ=255) GCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa > 4:1487133‑M2/1‑149 (MQ=255) CTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCtat < 4:66494‑M2/148‑2 (MQ=255) TGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcctatct < 4:1234374‑M2/149‑4 (MQ=255) TGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCaggcctatcttaa < 4:1489492‑M2/149‑7 (MQ=255) gCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGa < 1:210170/149‑1 (MQ=38) | GGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGC‑TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGA > NC_000913/4295808‑4296103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |