| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,596,873 | Δ1 bp | 6.2% | intergenic (‑136/+32) | ypfJ ← / ← purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,596,873 | 0 | C | . | 6.2% | 604.4 / 32.9 | 176 | intergenic (‑136/+32) | ypfJ/purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase |
| Reads supporting (aligned to +/- strand): ref base C (70/94); new base . (6/5); total (76/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.96e-01 | |||||||||||
Only 100 of 178 total aligned reads displayed.
CTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCTTTGTCCCACAG > NC_000913/2596725‑2597021 | tGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCa < 2:1711841/149‑1 (MQ=255) gCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAg < 2:393530/149‑1 (MQ=255) ccAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGc < 1:280923/149‑1 (MQ=255) ccAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGc > 1:1754358/1‑149 (MQ=255) ccAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGc > 1:1549756/1‑149 (MQ=255) aaCGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑g > 1:1001775/1‑149 (MQ=255) tAGATACCTCTACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGc < 1:1012155/149‑1 (MQ=255) tACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAga < 1:800360/149‑1 (MQ=255) aCCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAgat > 3:269120/1‑149 (MQ=255) cTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAgatga > 4:1452142/1‑149 (MQ=255) cTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAgatga < 3:1159781/149‑1 (MQ=255) cTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAgatga > 1:335314/1‑149 (MQ=255) cTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAgatga > 3:94072/1‑149 (MQ=255) tCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAgatgat < 2:587952/149‑1 (MQ=255) tCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAgatgat > 1:307156/1‑149 (MQ=255) caacaaTATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGatgatg < 1:924404/149‑1 (MQ=255) caacaaTATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGatgatg < 1:858162/149‑1 (MQ=255) acaaTATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGaa < 4:700764/149‑1 (MQ=255) caaTATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCCGCT‑GCACGGCAAGATGATGAAc > 4:184734/1‑149 (MQ=255) atatatTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAg < 1:69354/149‑1 (MQ=255) atatTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑aa < 3:1215107/149‑1 (MQ=255) atatTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑aa < 3:1590130/149‑1 (MQ=255) atTCATTATGGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCTGCT‑GCACGGCAAGATGATGAACAG‑aaaa > 4:1482802/1‑149 (MQ=255) tgcATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑aaaaa < 3:1376901/147‑1 (MQ=255) aTTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCa < 3:25607/149‑1 (MQ=255) aTTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCa < 1:434767/149‑1 (MQ=255) aTTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCa < 3:181623/149‑1 (MQ=255) aTTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCa < 1:1181107/149‑1 (MQ=255) aTTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTACAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCa < 3:1426836/149‑1 (MQ=255) tataGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGt < 2:1754358/149‑1 (MQ=255) tataGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGt < 2:1549756/149‑1 (MQ=255) ataGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTc < 1:100369/149‑1 (MQ=255) taGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCa < 3:430116/145‑1 (MQ=255) taGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCa > 4:430116/1‑145 (MQ=255) taGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTcc > 3:789111/1‑149 (MQ=255) aaTGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCt < 1:1231318/149‑1 (MQ=255) aaTGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCt > 3:1047095/1‑149 (MQ=255) aaTGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCt > 1:989710/1‑149 (MQ=255) aTGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTg < 3:743206/149‑1 (MQ=255) aTGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTAAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTg > 2:232705/1‑149 (MQ=255) aTCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTac > 2:410641/1‑149 (MQ=255) tCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAg < 1:1576784/137‑1 (MQ=255) tCGTAGGTGGTACAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGCGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTaca > 1:1431914/1‑149 (MQ=255) gTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACAcc < 1:16189/149‑1 (MQ=255) gTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACAcc > 2:958729/1‑149 (MQ=255) ttCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAggcggc > 1:1660969/1‑149 (MQ=255) tCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTG‑CAGCTGGCACGGCAAg > 4:758319/1‑106 (MQ=255) tCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTG‑CAGCTGGCACGGCAAg < 3:758319/106‑1 (MQ=255) cAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGcggcgg < 4:820307/149‑1 (MQ=255) agagGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTG‑CAGCTGGCACGGCaa > 4:387357/1‑103 (MQ=255) gagGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCggcgggc > 1:904909/1‑149 (MQ=255) agGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCggcgggcg > 1:606308/1‑149 (MQ=255) ggAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGa > 2:1183564/1‑149 (MQ=255) gAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGAc < 2:1272586/149‑1 (MQ=255) gATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATCAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 4:136608/149‑1 (MQ=255) aCCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCa < 2:1365917/149‑1 (MQ=255) ccACAGGAAAGCGGGATGAAATGGCGAAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCAt < 3:551929/149‑1 (MQ=255) cacaGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCTGGCGGCGGGCGACGGCTTCATa > 1:1506050/1‑149 (MQ=255) cacaGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATa > 3:1444793/1‑149 (MQ=255) acaGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAg < 4:1201082/149‑1 (MQ=255) aGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGt > 2:132559/1‑109 (MQ=255) gAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCtt > 4:272636/1‑149 (MQ=255) gCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGAt < 2:1012048/149‑1 (MQ=255) gggATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCa < 1:232705/149‑1 (MQ=255) ggATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAg < 3:1151776/149‑1 (MQ=255) gATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAGAAAAAATCAGTCCACCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGACCAg > 3:533340/1‑149 (MQ=255) gATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGAt > 4:1556821/1‑145 (MQ=255) gATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAgg < 2:1005386/149‑1 (MQ=255) aTGAAATGGCGGAGGAATGAGCGGTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGc > 4:10741/1‑149 (MQ=255) ggCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCGGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCa > 2:522277/1‑89 (MQ=255) ggCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCa < 1:522277/89‑1 (MQ=255) ggCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATa < 2:1089894/128‑1 (MQ=255) ggCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATa > 1:1089894/1‑128 (MQ=255) aggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGctct < 4:789111/149‑1 (MQ=255) gaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTgg < 3:442120/149‑1 (MQ=255) aaTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGc > 2:810017/1‑149 (MQ=255) aTGAGCGTTCGATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACTGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCAGAGGCTTCGATCAGGCCACCGAGGCTCTGGCg > 3:379436/1‑149 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGaaa < 2:921163/149‑1 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGaaa > 4:231359/1‑149 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGaaa < 2:1535840/149‑1 (MQ=255) ttCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACgg > 4:1625611/1‑149 (MQ=255) ttCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACgg > 2:1461599/1‑149 (MQ=255) aacAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCAGGGTAAGATGATGAAGAG‑AAAAATCTGTCCAGCTGGACGCCCAGGCGGCGGGCGACGGCCTCAAAGGCTTCGATCAGGCCAACGAGGCTCCGGCGGAGACga > 2:1042617/3‑148 (MQ=255) cAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTc < 1:593778/149‑1 (MQ=255) tGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATTAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 2:833027/101‑1 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTg < 2:1579137/149‑1 (MQ=255) atatatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑aa < 2:903096/59‑1 (MQ=255) tatatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGa > 3:89711/1‑123 (MQ=255) atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCa > 4:957756/1‑149 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCAt < 1:1042617/149‑1 (MQ=255) cGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTcc < 1:955173/142‑1 (MQ=255) gTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGtt > 2:632964/1‑149 (MQ=255) ttGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGttt > 1:1386653/1‑149 (MQ=255) gTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCt < 3:957756/149‑1 (MQ=255) gTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCt < 3:681126/149‑1 (MQ=255) gTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCt < 3:1541521/149‑1 (MQ=255) tCTTGCCGTG‑CAGCTGGCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATa < 2:208369/84‑1 (MQ=38) ttGCCGTG‑CAGCTGGCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCTTTg > 3:60787/1‑149 (MQ=255) tGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCTTTGt < 2:286806/149‑1 (MQ=255) gCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCTTTGTc < 1:1461049/149‑1 (MQ=255) | CTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCT‑GCACGGCAAGATGATGAACAG‑AAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCTTTGTCCCACAG > NC_000913/2596725‑2597021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |