| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,608,695 | C→G | 7.4% | intergenic (+46/+56) | zntA → / ← tusA | zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,608,695 | 0 | C | G | 7.4% | 416.9 / 8.4 | 148 | intergenic (+46/+56) | zntA/tusA | zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base C (65/69); new base G (2/9); total (67/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.37e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 159 total aligned reads displayed.
CGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAA > NC_000913/3608549‑3608842 | gCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTgg < 3:865334/149‑1 (MQ=255) tAGGGATGGCCGGGTTGTGGTTGGCAGTGCTGGCAGATACGGGGGCGACGCTGCTGGTGACTGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACGG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGgaga < 4:1435487/149‑1 (MQ=255) tAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGgaga < 2:1398032/149‑1 (MQ=255) aGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGagag > 2:608773/1‑149 (MQ=255) gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCTCCCCAGAGGGGCGAgg > 4:82985/1‑149 (MQ=255) ggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAggg < 4:1140112/149‑1 (MQ=255) ggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAggg > 2:1566390/1‑149 (MQ=255) gATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGt > 1:1273923/1‑149 (MQ=255) aTGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGtt < 2:1048272/149‑1 (MQ=255) gACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑g < 2:1370976/149‑1 (MQ=255) ccGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑ggg > 1:417943/1‑149 (MQ=255) cGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGt < 2:102753/149‑1 (MQ=255) cGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGt < 2:1639705/149‑1 (MQ=255) gggTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTg > 3:886406/1‑149 (MQ=255) gTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATATTGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGagag < 4:318746/137‑1 (MQ=255) gTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGagag > 3:318746/1‑137 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAgg < 1:966573/149‑1 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAgg < 2:9982/149‑1 (MQ=255) ttGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAgg < 3:577146/149‑1 (MQ=255) gtgGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAgggg < 2:1538269/149‑1 (MQ=255) ggctggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGaa > 1:599873/1‑149 (MQ=255) ggctggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGaa > 1:1561779/1‑149 (MQ=255) gctggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGaaa > 3:1313922/1‑149 (MQ=255) tggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑gg > 4:402349/1‑136 (MQ=255) tggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑gg < 3:402349/136‑1 (MQ=255) ggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAgg > 4:803596/1‑149 (MQ=255) ggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGGTA‑GGGTGAGGGGAAAAgg > 4:419052/1‑149 (MQ=255) ggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGCTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAgg > 4:1314746/1‑149 (MQ=255) gcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCTTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGGGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAggc < 4:743462/149‑1 (MQ=255) cAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGC‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAggcg < 3:1535935/149‑1 (MQ=255) cTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATc > 1:1173645/1‑149 (MQ=255) tGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑gg < 1:1088688/127‑1 (MQ=255) ggCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGa > 1:1265638/1‑149 (MQ=255) gCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGgaga < 1:589874/117‑1 (MQ=255) cgaGATACGGGGGCGACGATGCTGGTGACAGTTATCGGATTAGGCTTGTTGCACAGGAGAAAAGG‑AAACTGAATGGCAAAATTGTGCGGGACCGGG‑CCCCGCGCCCCCCTGGGAAAGGTGTTA‑GGGTGGGGGGAAAAGGCGGCATCGaa < 2:1105357/147‑1 (MQ=255) aGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGc > 1:280101/1‑149 (MQ=255) gggCGAGGGTGCGGGTGACAGCGAATGGGTTCAGTTTTTTGCGCAGGAGAAAAGGAAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGTGGAGAGGGTTA‑GGGTGAGGGAAAAAGGCGGCATCGAAGCCAATCAGc < 4:1182252/149‑1 (MQ=37) gggCGACGGTGCGGGGGACAGGGAAGGGGTTAAGATGGTTGGGCAGGAGAAAAGGCAAACCG‑ATCGCAACATGGGGCGGGATCGGC‑CCCCCCGCCCCGCTGGGGAG‑GGGTTAGGGGGGAGGGAAAAAGGCGGCATCGAAGCCAATCAGc < 4:1365608/149‑1 (MQ=255) ggCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGcc > 4:1222840/1‑149 (MQ=255) ccGACGGTGCGGGGGACAGGAAATGCGTTAAGTTTGTTGCGCAGGAAATAAGGCAAACCG‑ATCGAAACATGGGGCGCGACCGGC‑CCCCCCCCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGCCATCGAATCCAATCAGccc < 2:1265638/148‑1 (MQ=25) gcgggTGACAGCGAATGCTTTAAGTTTGTGGCGGAGGAGAAAGGGCAAACCG‑AGCGCAACATTGGGCGCGATGGGC‑CCCCTCGCCCCTCGGGGGAGGGGGTTA‑GGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAAc < 3:1356709/146‑1 (MQ=255) gCTGGTGAAAGCAAATGCGTTAGGATTGTTGCGCGGGAAAAAAGGCAACCGA‑ACCGAAACATTGGGCGCGATCGGC‑CCCCTCCCCCCTGTGGGAAGAGGTTTG‑GGGTGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAAc < 3:753656/149‑1 (MQ=255) gCTGGGGACGGGGAATGCGTTAAGATTGTGGCGCAGAAGATAAGGCAAACCG‑ATCGCAACATGGAGCGCGTCCGGC‑CCCCCCCCCCCTCTGGGGAGGGGGTTA‑GGGTGAGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAAc < 4:605197/149‑1 (MQ=255) ttaCAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCt > 4:1184813/3‑149 (MQ=255) cAGCGAATGCGTTAAGATTGTGGCGAAGGAGATAAGGCAACCCG‑ATCGCAACTTGGAGGGCGAGCGGT‑CCCCTCGCCCCCGTGGGGAGGGGGTTA‑GGGAGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTa < 3:803596/149‑1 (MQ=38) aGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTAc > 1:1579186/1‑149 (MQ=255) aGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTAc > 4:1157130/1‑149 (MQ=255) gggTTAAGGTTGGGCCGAAGGAAAAAAGGCAACCAG‑ACCACAACAGGGAGCGCTACAGGT‑CCCCCCGCCCCTGAGGGGGGAGTGTTG‑GGGCGGGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCaa < 1:1219860/147‑1 (MQ=255) tgTTAAGTTTGTGGCGCAGGAAATAAGACAAACCG‑ATCGCAACATTGGGGGAGATCGGC‑CCCCTCCCCCCTGGGGGGAGAGGGTTA‑GGGTGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCCACCGCCTTTACGAATCaaa < 3:1014594/148‑1 (MQ=255) gTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAAt > 3:1142403/1‑149 (MQ=255) gTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAAt > 4:1504731/1‑149 (MQ=255) gTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAAt > 3:1097979/1‑149 (MQ=255) aaGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGTTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAAc < 4:871186/149‑1 (MQ=255) aTTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGaaaa < 1:1359588/93‑1 (MQ=255) tgttgCGGAGGAGATAAGG‑AAACCGCACGGAAATATTGCGCGCGTCCGGC‑CCCCCCCCCCCTTTGGGGGGGGGGTTA‑GGGGGAGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATaa < 3:1706592/149‑1 (MQ=255) gttgCGCAGGAGAAAAGGCAACCCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCGTCGGGGGGGAGGGTTA‑GGGTGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAg < 4:442299/149‑1 (MQ=255) gcgcAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGGGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCa < 2:1541480/149‑1 (MQ=255) gcAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCctc > 2:1001422/1‑57 (MQ=255) gcAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCctc < 1:1001422/57‑1 (MQ=255) gaTAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATcc > 3:175879/1‑149 (MQ=255) aaGGCAAACCG‑GACGGAAAAATGGGGCGGATCGGGCCCCCTCCCCCTTCGGGGGGGGGGTTGG‑GGGTGGGGGGAAAAGGCGGCTTCGAAGCCAACCAGCCCCAATCAACCGCC‑TTACGAATCAAATAACGATAAGGCAGTCCATCCGtc < 2:924666/149‑1 (MQ=255) aaGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGtc > 1:1601822/1‑149 (MQ=255) ggCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGtctc > 1:1039196/1‑149 (MQ=255) aaaCCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt > 1:1641284/1‑149 (MQ=255) aaaCCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt > 1:1632795/1‑149 (MQ=255) agccG‑ATCGCAACATTGAGCGCGATCGGC‑CCCCTCGCCCCTCTGGGGAGGGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTa < 2:1173645/147‑1 (MQ=255) aaCCG‑ATCGCAACATTGAGCCCGATCGCT‑CCCCTCGCCCCTCGGGGGAGAGGGTTA‑GGGTGAGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTa < 2:1273923/149‑1 (MQ=255) aaCCG‑AGAGCAAGATCGAGCGCGACCGGC‑CCCCACGCCACTGGGGGGAGAGGGTTG‑GGGTGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTa < 3:436799/149‑1 (MQ=255) cccG‑ATCGCAACATGGCGCCTGATCGAT‑CCCCGCGACCCTCTGGGAAGTGGTTTA‑GCGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCTCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAg < 4:1030525/148‑1 (MQ=255) aTCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAAc > 1:614908/1‑149 (MQ=255) aCATTGGGCGCGATCGGC‑CCCCTCGCCCGTCTGGGGAGGGGGTTG‑GGGGGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTc < 3:1134654/149‑1 (MQ=255) ttGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCgtg > 2:856336/1‑149 (MQ=255) gAGCGCGATCGGT‑CCCCCCGCCCCCCGGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGtt < 4:281794/149‑1 (MQ=255) gATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATaa > 1:1328699/1‑149 (MQ=255) tCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGGGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAg < 4:530288/149‑1 (MQ=255) cctaacccTCTCCCCAGAGGGGCGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAgg > 1:1466746/6‑149 (MQ=255) t‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTAc > 2:1130210/1‑149 (MQ=255) cccccTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAg > 4:534012/2‑145 (MQ=255) cccccTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAg < 3:534012/144‑1 (MQ=255) cccTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaa > 1:754839/1‑149 (MQ=255) cccTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaa > 1:330857/1‑149 (MQ=255) cccTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCAATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaa > 2:1339191/1‑149 (MQ=255) cTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCTATAAAGGTACaaaa > 1:521927/1‑149 (MQ=255) cTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAg > 1:1086421/1‑141 (MQ=255) cTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAg < 2:1086421/141‑1 (MQ=255) cTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACaaaa > 2:1669468/1‑149 (MQ=255) ccccTGTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCa < 4:1247226/149‑1 (MQ=255) ccccTGGGGGGAGAGGGTTA‑GGGGAAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCa < 1:981479/149‑1 (MQ=255) ccccTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCa < 1:1669468/149‑1 (MQ=255) ccccACTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCa < 2:229860/149‑1 (MQ=255) cccTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTcc > 1:237770/1‑130 (MQ=255) cccTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTcc < 2:237770/130‑1 (MQ=255) ctctGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGa > 1:1294826/1‑149 (MQ=255) ctctGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGa > 1:1605284/1‑149 (MQ=255) ctctGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGa > 3:1577295/1‑149 (MQ=255) tctGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATTAAATAACGATAAGGCAGTCCATCCGTCTCttt < 3:922262/108‑1 (MQ=255) tctGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt > 4:922262/1‑108 (MQ=255) tctGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCgt < 4:1524063/122‑1 (MQ=255) tctGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCgt > 3:1524063/1‑122 (MQ=255) tctGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGaa > 2:1339333/1‑149 (MQ=255) | CGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAAGGCAAACCG‑ATCGCAACATTGAGCGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTA‑GGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAA > NC_000913/3608549‑3608842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |