| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,274,744 | T→C | 7.2% | intergenic (+83/+16) | ssb → / ← yjcB | single‑stranded DNA‑binding protein/putative inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,274,744 | 0 | T | C | 7.2% | 730.4 / 31.6 | 235 | intergenic (+83/+16) | ssb/yjcB | single‑stranded DNA‑binding protein/putative inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (114/103); new base C (9/8); total (124/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 237 total aligned reads displayed.
CAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCGAACCAACAGGC > NC_000913/4274596‑4274891 | agTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑g < 4:443315/149‑1 (MQ=255) tCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGa < 4:1554106/149‑1 (MQ=255) cGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCATAAC‑GGAGGCTTCt < 2:466861/149‑1 (MQ=255) ggCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTa < 3:1255660/149‑1 (MQ=255) gCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCATAAC‑GGAGGCTTCttt < 2:1175838/149‑3 (MQ=255) gcCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATc < 1:1723086/149‑1 (MQ=255) gcCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATc > 4:1318353/1‑149 (MQ=255) ccGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCa < 2:841664/149‑1 (MQ=255) ccGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCATAAC‑GGAGGCTTc > 1:1098369/1‑140 (MQ=255) ccGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCATAAC‑GGAGGCTTc < 2:1098369/140‑1 (MQ=255) gtatAACGAGCCGCCGATTGACTGTGATGATGACAGTCCGGTTTGTTTTGTCATTAAAACAATAGGTTATCTTGTTTTAAGGTGGATGATTAAAGCATCTGCCACCCATAAAAAAGAAGCCTCCGTTAT‑GAAGGCTTCTACGTATCAgg > 2:105978/4‑149 (MQ=255) gTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAgg > 2:1562473/1‑149 (MQ=255) cgccgATGGACTTTGATGATGACTTTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCATAAC‑GGAGGCTTCtttttt > 2:1595476/1‑128 (MQ=255) cgccgATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCAtt < 2:1070508/149‑1 (MQ=255) aTGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCAt < 1:78792/143‑1 (MQ=255) tttGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAGGGTGGATGATTAAACAACCTGCCAGCCATAAAAAAAAAG‑CTCCGGTATGGGGGGCTTCTAGGATTAAGGCCAAAA‑CATTGGGCAtttttgg > 1:961494/1‑144 (MQ=255) tttGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTgg > 1:1337126/1‑149 (MQ=255) tttGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTgg > 4:556614/1‑149 (MQ=255) ttGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGc < 4:807317/149‑1 (MQ=255) gatgaCATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGCTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGgtgt < 4:336586/149‑1 (MQ=255) atgaCATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTc > 4:1570934/1‑149 (MQ=255) tgaCATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCGCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCt < 2:672587/149‑1 (MQ=255) gaCATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGgtgt > 2:520220/1‑146 (MQ=255) gaCATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTg > 4:1047493/1‑149 (MQ=255) ataTTCCCTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCTTAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAAACATTGGCCATTGTGGCGGTGTCTGa < 1:1702391/147‑1 (MQ=255) aCATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGa > 3:1506122/1‑149 (MQ=255) aTTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGAtt < 4:1090531/149‑1 (MQ=255) cGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCAtc < 3:317517/149‑1 (MQ=255) ttCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCAtctc > 4:905155/1‑149 (MQ=255) ttCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCAtctc > 4:1245411/1‑149 (MQ=255) cTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCtctt < 1:1463046/149‑1 (MQ=255) tGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCa < 3:467031/115‑1 (MQ=255) tGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCAtc < 3:725152/144‑1 (MQ=255) tGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCtcttc < 1:1362420/149‑1 (MQ=255) gATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGa < 1:1279269/137‑1 (MQ=255) tttGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTat > 3:626432/1‑149 (MQ=255) tttGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTat > 2:256163/1‑149 (MQ=255) gTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTatcat > 1:500069/1‑149 (MQ=255) tCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAGATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTatcatc < 2:755377/149‑1 (MQ=255) tCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTatcatc < 3:1029354/149‑1 (MQ=255) aTTGAAACAAAAGGTTATCTTGTTGTAAGGTGGTTGATTCAAGCATTTGCCAGCCATACGAAAGACGCCACCGTTAT‑GGATGCTTTTAATTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGACTGAGTCATCTCTTCTATCAacac < 4:775058/149‑1 (MQ=255) aTTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGt < 2:1277690/91‑1 (MQ=255) aTTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCAc < 1:1000877/149‑1 (MQ=255) aTTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCAc > 3:819586/1‑149 (MQ=255) aTTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCAc > 3:191561/1‑149 (MQ=255) aaaaCAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGa > 3:782646/1‑149 (MQ=255) aaCAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACt > 3:1450478/1‑149 (MQ=255) aCAATAGGTTATATTGTTTTAAGGTGGATGATTATAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTc > 2:964020/1‑149 (MQ=255) cAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTatc > 2:1138277/1‑137 (MQ=255) cAATAGGTTATATTGTTTAAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTatc < 1:1138277/137‑1 (MQ=255) aaTAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGa < 4:957932/121‑1 (MQ=255) aaTAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGa > 1:471756/1‑149 (MQ=255) gTTGTATTGTTTGAAGGTGGATGATTAAAGCATCTGCCCGCCAGTATAAAGAATCCTCCGATAT‑GGAGTCTTCTACGTATCAGGACAAAATCTTTGGCCATGGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGAtgttg > 4:440038/1‑149 (MQ=255) gTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAg > 1:638585/1‑83 (MQ=255) gTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCGTTGTGGCGGCGTCTGATTCATCTCTTCTATCGTCACCGACTCGAtgttg > 4:1452951/1‑149 (MQ=255) tataTTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTtgtg < 2:1337126/149‑1 (MQ=255) atTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCa > 2:927182/1‑149 (MQ=255) ttttAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATa > 4:1718479/1‑149 (MQ=255) tAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCg < 3:420126/149‑1 (MQ=255) aaGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCgg < 1:150594/149‑1 (MQ=255) aGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGt < 2:1154086/149‑1 (MQ=255) ggTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCAtt < 2:1721231/80‑1 (MQ=255) tGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGAt > 1:53460/1‑149 (MQ=255) tGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGAt > 3:1607302/1‑149 (MQ=255) gatgatTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCtctt > 2:1395269/1‑107 (MQ=255) atTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGc > 4:541708/1‑149 (MQ=255) tAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTTTATCATCATCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGGCa > 4:1396137/1‑149 (MQ=255) aaGCATCTGCCAGCCATAAAAGAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGAtgttgt > 1:1220486/1‑123 (MQ=255) aaGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAg < 4:1181049/41‑1 (MQ=255) aaGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCAtt > 3:1298876/1‑149 (MQ=255) cATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATtgtg < 2:585835/149‑1 (MQ=255) cATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATtgtg < 3:556614/149‑1 (MQ=255) aTCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGa > 2:441140/1‑149 (MQ=255) cagccaTAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCaa > 1:232087/1‑149 (MQ=255) agccaTAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAg > 2:1476895/1‑149 (MQ=255) ccaTAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCa > 4:679725/1‑149 (MQ=255) caTAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCaa > 4:516632/1‑149 (MQ=255) aTAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAAc < 3:110418/149‑1 (MQ=255) tAAAAAAGAAGTCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGACTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGCTAATGTCCGCCATTGAGATGCCAAGCAAcc > 1:913543/1‑149 (MQ=255) tAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGa > 1:1391541/1‑122 (MQ=255) tAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAAcc > 1:1583076/1‑149 (MQ=255) aaaaaaGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCAtt > 2:838344/1‑132 (MQ=255) aaaaGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTcc < 1:1745220/124‑1 (MQ=255) aaaaGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTcc > 2:1745220/1‑124 (MQ=255) aaaGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCAt < 1:927182/149‑1 (MQ=255) aaaGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCAt > 2:371684/1‑149 (MQ=255) tagaagCCTCCATAAC‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGAtgtt < 1:1265956/99‑1 (MQ=39) tagaagCCTCCATAAC‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGAtgtt > 2:1265956/2‑100 (MQ=39) aagaagCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCAt < 1:263485/148‑1 (MQ=255) agaagCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTg < 3:920827/149‑1 (MQ=255) aagCCTCCATAAC‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCg > 2:506260/1‑149 (MQ=255) gCCTCCGTTGT‑GGAGGCTTCTACGTAGCAGGTCAAAATCATTGGCCATTGTAGCGGTGTCTGATTCATCGCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATTTCCGCCATTGTGATGCCAAGCAACCCCATTGCGaa < 3:1396137/149‑1 (MQ=255) ccTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCGAAc < 3:1530670/149‑1 (MQ=255) cTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTg < 1:1167287/109‑1 (MQ=255) cTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCGAAcc > 4:1018082/1‑149 (MQ=255) cTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCGAAcc > 1:845743/1‑149 (MQ=255) cTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCGAAcc < 4:1506786/149‑1 (MQ=255) tCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCGAACCa > 3:1481927/1‑149 (MQ=255) tCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCGAACCa > 1:1496685/1‑149 (MQ=255) gTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAAc < 4:248506/132‑1 (MQ=255) | CAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGATTTGTCATTAAAACAATAGGTTATATTGTTTTAAGGTGGATGATTAAAGCATCTGCCAGCCATAAAAAAGAAGCCTCCGTTAT‑GGAGGCTTCTACGTATCAGGTCAAAATCATTGGCCATTGTGGCGGTGTCTGATTCATCTCTTCTATCATCACCGACTCGATGTTGTGCCAGATAGCGGTGATGTCCGCCATTGTGATGCCAAGCAACCCCATTGCGAACCAACAGGC > NC_000913/4274596‑4274891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |