| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,778,124 | A→C | 5.4% | intergenic (+342/+22) | ypjF → / ← ypjA | CP4‑57 prophage; toxin of the YpjF‑YfjZ toxin‑antitoxin system/adhesin‑like autotransporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,778,124 | 0 | A | C | 5.4% | 1097.8 / 43.3 | 331 | intergenic (+342/+22) | ypjF/ypjA | CP4‑57 prophage; toxin of the YpjF‑YfjZ toxin‑antitoxin system/adhesin‑like autotransporter |
| Reads supporting (aligned to +/- strand): ref base A (155/154); new base C (8/10); total (165/166) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01 | |||||||||||
Only 100 of 331 total aligned reads displayed.
AGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCTTTAATACCTGCCTGGTA > NC_000913/2777977‑2778271 | cccACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGAtgt < 3:2210556/149‑1 (MQ=255) caccaATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTgg < 3:1201544/149‑1 (MQ=255) caccaATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTgg > 2:1002153/1‑149 (MQ=255) caccaATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTgg < 3:338958/149‑1 (MQ=255) accaATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTggg > 4:499003/1‑149 (MQ=255) aaTCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACATCTGTGGGCtt < 2:175864/149‑1 (MQ=255) aaTCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACATCTGTGGGCtt < 1:1672802/149‑1 (MQ=255) aTCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCttt > 1:772459/1‑149 (MQ=255) cATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCttt < 2:274494/147‑1 (MQ=255) aTGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACATCTGTGGGCtttcat < 2:1654156/149‑4 (MQ=255) aTGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTc > 3:587470/1‑149 (MQ=255) aTGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTc < 3:997719/149‑1 (MQ=255) gATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGt < 1:409937/149‑1 (MQ=255) gACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATg > 4:1657253/1‑149 (MQ=255) gACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATg < 2:1436040/149‑1 (MQ=255) gACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATg < 4:2225851/149‑1 (MQ=255) ggTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATAAGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTc < 3:2108925/149‑1 (MQ=255) aGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACg > 3:46927/1‑149 (MQ=255) aGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACg > 1:1141552/1‑149 (MQ=255) gACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGAc < 2:405118/149‑1 (MQ=255) caacaCCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCa < 1:1002153/149‑1 (MQ=255) aacaCCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑g > 3:800501/1‑149 (MQ=255) aacaCCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑g > 1:2243830/1‑149 (MQ=255) acacCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑Gt < 4:663778/149‑1 (MQ=255) aacaaAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑Gtt < 4:2040685/145‑1 (MQ=255) aacaaAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTcaca > 1:308888/1‑149 (MQ=255) aacaaAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTcaca > 4:1700199/1‑149 (MQ=255) aacaaAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTcaca > 3:2442214/1‑149 (MQ=255) aacaaAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTcaca < 1:1901413/149‑1 (MQ=255) acaaAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCacac < 2:1953365/149‑1 (MQ=255) aaaaaCAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCa < 3:1642109/149‑1 (MQ=255) aaaaCAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAg > 1:2474921/1‑149 (MQ=255) ttAGAAGTCTCAGCAAAACCCCGACCAGACGGTGAGGTGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCGTTTTCGTTGATGGTCAGAACGACCA‑GTTCACATCAGCTACCGCGTTc < 2:1671794/149‑1 (MQ=255) ttAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTc > 3:2058460/1‑149 (MQ=255) ttAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTc > 3:2010840/1‑149 (MQ=255) ttAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTc > 3:1785020/1‑149 (MQ=255) ttAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGAGACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTc < 1:596611/149‑1 (MQ=255) tAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTcc > 2:1110589/1‑149 (MQ=255) aGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACgg < 4:1867692/149‑1 (MQ=255) aGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACgg < 2:576032/149‑1 (MQ=255) aGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACAGGAAAGCCCACAGATGTGGGCTTTTTCGTGGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACgg < 3:1303292/149‑1 (MQ=255) gTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCGGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACggg > 2:2059611/1‑149 (MQ=255) gTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACggg < 4:587470/149‑1 (MQ=255) tctcAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACgggg > 1:2132661/1‑149 (MQ=255) tcAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGTATAAGCAAAGGAGCCGTGGCTCATGGTAACATGAAAGCACACAGAGATGGGCTTTTTCGTTGATGGTCAGAACGACCG‑GTTCACACCAGCTACCACGTTCGACGGGGAt > 3:1532875/1‑149 (MQ=37) tcAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGtt > 4:849729/1‑139 (MQ=255) tcAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGAt > 2:200159/1‑149 (MQ=255) aaaaCACCGACCAGCCGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGT‑AGATGGAAGCCCCCAAGTTTTGGCCTTTTCCTTTGTGGTTAAAAAGATCAGGTTCACA‑CAGCCTCCGCCTTTCACGGGGAATcccaa > 2:2381799/1‑146 (MQ=255) aaaaCACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTTCTGGTAACATGAAAGCCCACAGCTGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCcac > 3:644618/1‑149 (MQ=255) cacCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCg > 1:856322/1‑149 (MQ=255) aGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGTGGATTCCACACCGGCACCATg > 4:335833/1‑149 (MQ=255) gACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATgg < 4:295981/149‑1 (MQ=255) aCGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGc < 3:1700199/149‑1 (MQ=255) ggTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCta > 1:195349/1‑149 (MQ=255) gaggagACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATac < 4:1988450/149‑1 (MQ=255) gaggagACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATac > 4:2408332/1‑149 (MQ=255) cATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATaccccaccc < 1:2023749/149‑1 (MQ=255) tAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGa < 3:695359/82‑1 (MQ=255) aaaaGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCaa > 4:1402046/1‑149 (MQ=255) aaaGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAg < 4:800501/149‑1 (MQ=255) aaGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAgc < 3:849239/149‑2 (MQ=255) aaGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGa < 2:2335041/149‑1 (MQ=255) aaGGATACGCAAAGCAGCCGGGGCTCATGGTAACATGAAAGCCCACAGATGTGCGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTACACGGGGATACCACACCGGCACTATGGCTATACCCCACCCCaata < 4:1303749/149‑3 (MQ=21) aGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGATGATGGTCAGAACGACCA‑GTTCATACCAGCTACCGCGTTCCACGGGGATTCCACGCCGGCACTCTGGCTATACCCCACCCCAAGAt < 2:2199236/149‑1 (MQ=255) ggATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGAt < 3:1404158/48‑1 (MQ=255) ggATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTACACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATg > 1:1024759/1‑149 (MQ=255) gATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGc > 4:1227268/1‑149 (MQ=255) cgaaaaGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAATCTGCCCGc < 2:227316/146‑1 (MQ=255) gCAAAGGAGCCGCGGCTCCTGGTAACATGTGAGCCCACAGTTGTGGGCTTTTTCGTTGATGGTCAGAACGACGA‑GTTCACACCAGCTACCGCGATCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCt < 4:644618/149‑1 (MQ=21) gCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCt > 4:2116713/1‑149 (MQ=255) gCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCt > 1:1544091/1‑149 (MQ=255) caGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTc < 4:1874623/103‑1 (MQ=255) gAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑Gtt > 3:1493255/1‑71 (MQ=255) aGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTa < 3:2301396/149‑1 (MQ=255) aGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTa < 1:1778313/149‑1 (MQ=255) gCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTAc > 1:1233002/1‑149 (MQ=255) ccGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCacac < 4:1326048/103‑1 (MQ=255) ccGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCacac > 3:1326048/1‑103 (MQ=255) ccGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTAct > 2:713521/1‑149 (MQ=255) cTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCAAAGATGCCCGCTTAACGTACTGCTGaa > 1:1492385/1‑149 (MQ=255) cTCCTGGTAACATGAAAGCCCACAGATGTCGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGGACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGaa < 2:920034/149‑1 (MQ=255) tGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTGAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAg > 4:1527660/1‑149 (MQ=255) tGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCtgagtgag < 1:536066/149‑1 (MQ=255) tGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAg < 1:2353432/149‑1 (MQ=255) ggTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAgg < 3:1035740/149‑1 (MQ=255) ggTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAgg < 1:939653/149‑1 (MQ=255) ggTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAgg > 1:1398200/1‑149 (MQ=255) ggTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAgg < 2:856322/149‑1 (MQ=255) tAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCt > 4:377629/1‑149 (MQ=255) aaCATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCtt < 2:782171/149‑1 (MQ=255) aaCATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCtt < 1:2314808/149‑1 (MQ=255) aaCATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCtt < 2:1331247/149‑1 (MQ=255) aCATGAAAGCACACAGATGTGGGCTTTTTCGTGGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTCCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCTCTTAACGTACGGCTGAATGATGCttt < 4:1581246/149‑1 (MQ=18) tGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCTTTAAt > 3:2069004/1‑149 (MQ=255) aaaGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCTTTAATAc < 2:527191/149‑1 (MQ=255) cccACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCTTTAATAcctgc < 2:1181383/149‑1 (MQ=255) acaGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCTTTAATAcctgcctg > 3:1939350/1‑149 (MQ=255) acaGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCTTTAATAcctgcctg > 3:285187/1‑149 (MQ=255) taGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCTTTAATACCTGCCTgg < 4:1706733/148‑1 (MQ=255) aGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCTTTAATACCTGCCTGGt > 1:1723554/1‑149 (MQ=255) | AGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGATGGTCAGAACGACCA‑GTTCACACCAGCTACCGCGTTCCACGGGGATTCCACACCGGCACTATGGCTATACCCCACCCCAAGATGCCCGCTTAACGTACTGCTGAATGAGGCTTTAATACCTGCCTGGTA > NC_000913/2777977‑2778271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |