| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,145 | C→G | 12.4% | intergenic (+128/‑70) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,145 | 0 | C | G | 12.4% | 2600.8 / 130.3 | 868 | intergenic (+128/‑70) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (553/199); new base G (2/109); total (555/313) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 0.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 875 total aligned reads displayed.
GCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCT > NC_000913/3780997‑3781293 | gCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGcc > 2:898534/1‑149 (MQ=255) gAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 1:614983/149‑1 (MQ=255) gAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 4:632862/149‑1 (MQ=255) gAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg > 3:1396324/1‑149 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg > 4:1754981/1‑149 (MQ=255) aGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGt < 1:363163/149‑1 (MQ=255) aGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGt < 2:1402083/149‑1 (MQ=255) aGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGt < 2:83355/149‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTg > 3:463039/1‑149 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg < 4:899544/149‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg < 2:589872/149‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg < 3:2057377/149‑1 (MQ=255) gAATGCAGCATGGTCGTTTGCGCCCCCTCACCCTAACCCGCTCCCTCAGGGAGAGGGGACCGTTTGGCGCTGTATGTACTCCCTCACTCTGAAACGGCACCGCACTC‑TTTTTTTCTCCCTCGCCCCTTCGGGGAGGGGGCCGGGGGGAg > 2:1955739/1‑149 (MQ=255) aTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg < 2:659929/149‑1 (MQ=255) aTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg < 2:756343/149‑1 (MQ=255) aTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACCCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg > 3:520862/1‑149 (MQ=255) tGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgggg > 2:377790/1‑149 (MQ=255) tGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgggg < 2:1016224/149‑1 (MQ=255) gTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCAc > 1:2466198/1‑149 (MQ=255) gTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCAc > 1:912832/1‑149 (MQ=255) tttGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGccagatc > 3:1010014/1‑144 (MQ=255) tttGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACt > 3:633313/1‑149 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCa > 4:270527/1‑149 (MQ=255) ccccccccTACCCCCCCCCCCCGGGGGGGGGGGCCCGTCCGGCGTTTTAGGTTCCCCCCCCCGCT‑AAACCGCCCCCCCCTCTTTTTTTTCCCCCCCGCCCC‑GCGGGGGGGGGGGCGGGGTGGGGGGAAAAAGGCCGCACTGCTCACCaa < 3:2461164/144‑1 (MQ=255) cacACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGATGGG‑AAAAGGCCGCACTGCTCACCCAt > 1:2101332/3‑149 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAAt > 3:1565503/1‑149 (MQ=255) tCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCCCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAAtt > 4:222914/1‑149 (MQ=255) aCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGt > 1:817138/1‑117 (MQ=255) cccTACCCCTCTCCCTGAGGGAGGGGGGACCTTTGGGTTTTCTGTTTCCCCCCAAATTCCAAAAGGGCCCCGCACGT‑TTTATTCCCTGCCCCCCCCTCGGGGGGGGGGGCGGGGGTGAGGGG‑TAAAGGCCGCACTGCTCACCACTGTTc < 4:1576733/149‑1 (MQ=255) ccTAACCCTCTGCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCt > 1:1315687/1‑149 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgggg > 1:2380279/1‑114 (MQ=255) caaaCCCCCCCCCTGAGGGAGGGGGGCCCTTCCGGCGCTTTATGTCCCCCCCCTCTCAGAACCGCCCCCCCCCTT‑TTTTTTCCCCCCTCCCCCCTCCGGGAAGGGGGCGGGGGAGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg < 3:1861811/147‑1 (MQ=255) ccTCTCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 3:410704/1‑149 (MQ=255) ccTCTCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 1:1601927/1‑149 (MQ=255) ccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCTCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 4:1472048/1‑149 (MQ=255) tctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 1:26530/1‑149 (MQ=255) ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccc > 3:1673327/1‑149 (MQ=255) ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccc > 1:1006455/1‑149 (MQ=255) ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccc > 2:1237046/1‑149 (MQ=255) cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:1593560/106‑1 (MQ=255) ggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGGTATCCTGCCCCCGCAc > 3:2119161/1‑149 (MQ=255) ggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc > 4:1391979/1‑149 (MQ=255) ggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc > 4:208158/1‑149 (MQ=255) gggggACCGTGCGGCGTTGTATGTCCCCCCTCCCTCTGAAACGACCCCGCACTC‑TTTTTTTCCCCCTCCCCCCTCGGGGGAGGGGGCGGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAg < 3:1257373/148‑1 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg > 1:174386/1‑149 (MQ=255) ggACCGTTCGGCGCTGTATTTCCCCCCCCTCTCTGAAACGACACCGCTCTC‑TTTTTTTCCCCCCCCCCCCCCGGGGGAGAGGGCGGGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg < 2:176957/149‑1 (MQ=255) ggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 3:594601/1‑149 (MQ=255) gACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGCGGAGAGGGCCGGGGGGAGGGG‑AAAAGGCCGCACTGCTCACCACTTTTCTGCTATCCTGCCCCCGCACTAAggggg > 1:473899/1‑149 (MQ=255) aCCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGTG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc > 3:1293166/1‑149 (MQ=255) cttttCGGCGTTGTTTGTCCCCCCCCCCTCTAAAACGCCACCCCTCTT‑TTTTTCCCCCCCCCCCCCCTCGGGGGGGGGGCGGGGGGTGGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGcg < 1:111000/146‑2 (MQ=255) gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt > 1:1412253/1‑149 (MQ=255) ttCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGGGAGGGG‑AAAAGGCCGCACTGCTCACCACTTTTCTGCTATCCTGCCCCCGCACTCAGGGGGCAGTa > 1:1971449/1‑149 (MQ=255) tCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt > 3:1945858/1‑149 (MQ=255) gttgtatgtcCCCCCCCCCTCTAAAACGCCCCCCCACTT‑TTTTTTTCCCCCCCCCCCCCCCGGGGAGGGGGCGGGGGGGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa < 2:283416/147‑1 (MQ=255) gcTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa > 3:1506304/1‑149 (MQ=255) cTGTATGTCCCCCCCCCCTTTAAACCGACCCCGCCTTT‑TTTTTTTCCCCCCCGCCCCTCCGGGGGGGGGGCGGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa < 4:455676/149‑1 (MQ=255) ggtatgtaCTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGGGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAAc > 4:776388/2‑149 (MQ=255) gtatgtaCTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACa > 3:862379/1‑149 (MQ=255) gcaCTCCCTCACTCTAAAACTACCCCGCACTT‑TTTTTTTCTCCCTCGCCCCTGCGGGGAGGGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt < 1:1519526/147‑1 (MQ=255) cncTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt > 3:326169/1‑149 (MQ=255) ccTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa > 3:938975/1‑149 (MQ=255) aCTCTGAAACGACACCGCGCTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGaa > 3:2296624/1‑149 (MQ=255) gAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 3:79967/1‑149 (MQ=255) aaCGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGGGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaaa < 3:1183471/149‑1 (MQ=255) aaCGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaaa > 2:322106/1‑149 (MQ=255) gACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg > 2:185080/1‑48 (MQ=255) gACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 1:185080/48‑1 (MQ=255) gACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTc > 1:2174608/1‑149 (MQ=255) acCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGc > 2:2227400/1‑149 (MQ=255) gCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCCATTTTCTGCTATCCTGCGCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaa > 3:730389/1‑149 (MQ=255) cACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaaa > 1:125516/1‑149 (MQ=255) tttttttcCCCCCCCCCCCCTCCGGGGAGGGCGCCGGGGGGGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt < 2:2389592/148‑1 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTTCCCCCGCCCTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTg > 4:1109004/1‑149 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTg > 3:1717480/1‑149 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTg > 1:2273363/1‑149 (MQ=255) tttttttCCCCCCCCCCCCCCCGGGGGGGGGGGCGGGGGGGGGGGAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt < 1:32006/149‑1 (MQ=255) ttttcCCCCCCCCCCCCCCCGGGGGGGGGGCCGGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGc < 2:2099288/149‑1 (MQ=255) cccggcccTCTCCCCGGAGGGGCGAGGGCCGGGGAGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCaa > 4:1041643/6‑149 (MQ=255) tctcCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAca > 4:1442523/1‑149 (MQ=255) cccccCGCCCCCCCGGGGGGGGGGCGGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatc < 4:1294769/148‑1 (MQ=255) ccccccccccccGGGGGGGAGGGCGGGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatca < 4:1234953/143‑1 (MQ=255) tccccccccTCGGGGGAGGGGCCGGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAACTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatcat < 2:1109527/144‑1 (MQ=255) ccTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACGTCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatcat > 1:742359/1‑149 (MQ=255) ccTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatcat > 4:847856/1‑149 (MQ=255) cTCGCGCCTCCGGGGAGCGGGCCGGGGTGATGGG‑AAAAGGCCGAACTGCTCACCAATTTTCTGCTATTCTGCACCCGCCCTAAGATGGCATTATGCTAAACATCGTACTTTATGAACTAGAAATTCCTACAAAAACGGGGAAGatcatc > 4:1680440/1‑149 (MQ=255) cTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAg < 4:396734/84‑1 (MQ=255) tCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 3:2236732/1‑149 (MQ=255) tCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 2:1338541/1‑149 (MQ=255) tCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 4:2428933/1‑149 (MQ=255) cccTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt < 1:2044671/92‑1 (MQ=255) cccTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCt > 2:2046609/1‑149 (MQ=255) ccTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCTTAGTGCGGGGGCAgg < 3:107604/86‑2 (MQ=38) cTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTc > 2:2285601/1‑119 (MQ=255) cTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCttt > 4:1879758/1‑149 (MQ=255) cTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCttt > 2:2490539/1‑149 (MQ=255) tCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg > 4:1986361/1‑149 (MQ=255) cgggggAGGGGGCCGGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTgc < 4:52703/147‑1 (MQ=255) gggggggCGGGGGGGGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTaa < 2:481854/145‑1 (MQ=255) agGGCCGGGGGGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCACACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATAc < 1:54985/149‑1 (MQ=255) ccGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGc < 2:1490987/149‑1 (MQ=255) | GCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCT > NC_000913/3780997‑3781293 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |