| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,612,329 | A→G | 5.5% | intergenic (+40/‑82) | ytjA → / → yjjU | uncharacterized protein/putative patatin‑like family phospholipase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,612,329 | 0 | A | G | 5.5% | 819.2 / 21.0 | 254 | intergenic (+40/‑82) | ytjA/yjjU | uncharacterized protein/putative patatin‑like family phospholipase |
| Reads supporting (aligned to +/- strand): ref base A (110/127); new base G (5/9); total (116/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 256 total aligned reads displayed.
GGTTTGGTGGTCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAGCCTG > NC_000913/4612183‑4612477 | ggTTTGGTGGTCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGc < 2:2458139/149‑1 (MQ=255) ggtggtCGGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACt > 2:1680607/1‑149 (MQ=255) gtCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCt < 1:810248/149‑1 (MQ=255) tCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCGCT‑GGACTGGCtt < 1:440098/149‑1 (MQ=255) cTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCGCT‑GGACTGGCttt < 3:1700485/149‑1 (MQ=255) cTGGCCGGTAACGCTGCAGGCGCAGCTAAAATTGTCTATGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTCTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCGCT‑GGACTGGCttt < 4:446149/149‑1 (MQ=255) tGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCtttt > 2:1690591/1‑149 (MQ=255) tGGCCGGTACCGCTGCAGGCACAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCtttt > 2:1839185/1‑149 (MQ=255) ggTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGt < 2:2009630/149‑1 (MQ=255) aCCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGtttt < 2:597654/149‑1 (MQ=255) aCCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGtttt > 1:2023897/1‑149 (MQ=255) ccGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTa < 1:1016630/149‑1 (MQ=255) gcgcAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGaataat > 2:753511/1‑149 (MQ=255) aGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAAt < 3:1102454/149‑1 (MQ=255) gCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAAtt < 1:1245863/149‑1 (MQ=255) aaaaTTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCg > 4:1949139/1‑149 (MQ=255) aaaTTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGt < 4:1422303/149‑1 (MQ=255) aaaTTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGt < 2:933384/149‑1 (MQ=255) tGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAACCGACCCTAGATTTCAGACCATTAAGAATATTTTATCCAAAGCCAGTCTAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACt < 4:1720702/149‑1 (MQ=255) tGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGAACATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTCCt < 3:2416043/149‑1 (MQ=255) tCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACttt > 3:1946516/1‑149 (MQ=255) cTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTg < 1:2478312/149‑1 (MQ=255) tttGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGt > 1:1955436/1‑149 (MQ=255) ttGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTc < 4:1111698/149‑1 (MQ=255) gtcgGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTTGGGAATAATAAATTGCGTTACTTTGTTATTCt > 2:40669/1‑149 (MQ=255) gtcgGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACtt > 2:726444/1‑140 (MQ=255) gtcgGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCt > 4:677642/1‑149 (MQ=255) cgGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTg < 2:2271878/130‑1 (MQ=255) gggATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACttt < 4:1009164/138‑1 (MQ=255) gggATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTc > 3:2006556/1‑149 (MQ=255) ggATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTca < 3:2283696/149‑1 (MQ=255) ggATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTca < 3:2084409/149‑1 (MQ=255) ggATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTca < 1:1520738/149‑1 (MQ=255) ttattCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCacaa > 1:834083/1‑149 (MQ=255) tattCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCacaac > 3:1176531/1‑149 (MQ=255) tCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACttt > 4:1376855/1‑130 (MQ=255) tCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACaaa > 3:1123032/1‑149 (MQ=255) tGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTGCACAACaaaaa < 3:1411750/149‑1 (MQ=255) ttCCTGGTGAGTTTGTTCATGGGCCGAAAGCGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GCACTGGCTTTCGCGGTTTTAGCGAATAATAAATTGCGTTACTCTGTCATTCTTTCACAACAAAAACa < 1:1748843/149‑1 (MQ=255) ttCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACa > 3:628012/1‑149 (MQ=255) tCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAg < 1:2437722/149‑1 (MQ=255) cTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTc > 2:2380530/1‑134 (MQ=255) cTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTc < 1:2380530/134‑1 (MQ=255) tGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGc < 2:512903/91‑1 (MQ=255) tGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGc > 1:512903/1‑91 (MQ=255) tGGTGAGTTTGTTCATGGGCCAAAAACGACCCTAGATTTCAGACAATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGaa < 4:2374297/149‑1 (MQ=255) ggTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAg > 4:803522/1‑149 (MQ=255) ggTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAg < 3:172383/149‑1 (MQ=255) tGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCGCT‑GGACTGGCttt > 2:688237/1‑85 (MQ=39) tGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCGCT‑GGACTGGCttt < 1:688237/85‑1 (MQ=39) tGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGc > 3:716668/1‑149 (MQ=255) tttGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCg < 1:1668510/85‑1 (MQ=255) ttCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTgg > 1:1428149/1‑149 (MQ=255) aTGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGc > 3:677482/1‑149 (MQ=255) ggggCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACTACAAAAAAAGGAAGGCAGGGTTGGGGCAg > 4:1732011/1‑149 (MQ=255) gggCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTa > 1:1618861/1‑82 (MQ=255) gggCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTa < 2:1618861/82‑1 (MQ=255) gggCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAg > 2:1984566/1‑149 (MQ=255) cGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACttt > 1:623963/1‑102 (MQ=255) aaaCGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATAc < 3:1569090/149‑1 (MQ=255) aaCGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTc < 4:1607816/109‑1 (MQ=255) aaCGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTc < 2:1136034/109‑1 (MQ=255) aCGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCt < 2:143015/149‑1 (MQ=255) gACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTgg < 2:581960/133‑1 (MQ=255) gACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGt > 4:1740864/1‑149 (MQ=255) ccTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAAc > 3:1790292/1‑149 (MQ=255) cTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACg > 3:862372/1‑149 (MQ=255) aGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCGCT‑GGACTgg < 4:370521/51‑1 (MQ=25) acttCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGGATACCTGTAACGCTTg < 2:883296/147‑1 (MQ=255) aTTTCAGACCATTAAGAAAATTTTAGCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTg < 1:1119226/149‑1 (MQ=255) tttCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTgg < 4:178094/149‑1 (MQ=255) tttCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTgg < 1:753511/149‑1 (MQ=255) tttCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTgg > 4:2291637/1‑149 (MQ=255) tttCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTgg < 1:783535/149‑1 (MQ=255) aGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGc < 3:41052/123‑1 (MQ=255) gACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAata < 4:475022/149‑1 (MQ=255) gACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAata < 2:1743683/149‑1 (MQ=255) ccATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATAtt < 1:3171/149‑1 (MQ=255) aaGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGcc < 1:2220073/149‑1 (MQ=255) aaGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGcc < 4:2202223/149‑1 (MQ=255) aGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCg > 4:1878284/1‑149 (MQ=255) gAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGt > 4:1238189/1‑149 (MQ=255) aaaaTTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGtt < 1:1839185/149‑1 (MQ=255) ttttATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAAc > 4:1313594/1‑89 (MQ=255) ttttATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAAc < 3:1313594/89‑1 (MQ=255) aTCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTTTCGCTaa < 1:1198249/149‑1 (MQ=255) aTCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTaa < 1:894596/149‑1 (MQ=255) gcaaaaGCCAGTCC‑GCTGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTgggg < 1:567147/99‑1 (MQ=38) cAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGc < 3:980736/149‑1 (MQ=255) aaaGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCttt > 1:1712768/1‑69 (MQ=255) aaaGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAat < 2:126039/126‑1 (MQ=255) aaaGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGcc > 4:1806523/1‑149 (MQ=255) aaaGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGcc > 3:2146861/1‑149 (MQ=255) aaGCCAGTCCGCT‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCg > 4:2356744/1‑149 (MQ=255) aaGCCAGTCC‑GCTGGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCg > 3:952519/1‑149 (MQ=255) aGCCAGTCCGCT‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGCAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGt > 4:167410/1‑149 (MQ=255) gTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAg > 2:100368/1‑149 (MQ=255) cAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAGCCt < 1:2280427/149‑1 (MQ=255) cAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAGCCt < 4:2146861/149‑1 (MQ=255) aGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAGCCTg < 3:2340608/149‑1 (MQ=255) | GGTTTGGTGGTCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAGATTTCAGACCATTAAGAAAATTTTATCCAAAGCCAGTCCAGC‑GGACTGGCTTTTGCGGTTTTAGCGAATAATAAATTGCGTTACTTTGTCATTCTTTCACAACAAAAACAGGAAGGCAGAGGTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAGCCTG > NC_000913/4612183‑4612477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |