| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,987,859 | G→C | 6.0% | intergenic (‑101/+14) | yecJ ← / ← azuC | DUF2766 family protein/acid‑inducible small membrane‑associated protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,987,859 | 0 | G | C | 6.0% | 1068.8 / 38.8 | 312 | intergenic (‑101/+14) | yecJ/azuC | DUF2766 family protein/acid‑inducible small membrane‑associated protein |
| Reads supporting (aligned to +/- strand): ref base G (141/151); new base C (8/11); total (150/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 317 total aligned reads displayed.
AACCACATCAGAAACCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTT > NC_000913/1987711‑1988007 | ccACATCAGAAACCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGTGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAg > 3:2407378/1‑149 (MQ=255) ccACATCAGAAACCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAg > 3:1558136/1‑149 (MQ=255) acaTCAGAAACCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCa > 3:335747/1‑149 (MQ=255) caTCAGAAACCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAg < 2:2183659/149‑1 (MQ=255) aaCCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACTGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGtttttt < 3:272633/149‑1 (MQ=255) aaCCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑TCCGGCAGGtttttt > 3:852073/1‑149 (MQ=255) aaCCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGtttttt > 2:1907625/1‑149 (MQ=255) aaCCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGtttttt < 1:1746714/149‑1 (MQ=255) aaCCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGtttttt < 2:1262988/149‑1 (MQ=255) aaCCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACAC‑AAAAAACCTGCTCCG‑GCAGGttttttt < 4:138838/149‑2 (MQ=255) aCCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑TCCGGCAGGttttttt < 4:1507201/149‑2 (MQ=255) aCCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTg < 4:1893506/149‑1 (MQ=255) aCCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTg > 2:34942/1‑149 (MQ=255) aTTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTAt > 3:1995524/1‑149 (MQ=255) ttCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATc < 2:2017745/149‑1 (MQ=255) cTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGa < 2:1019113/149‑1 (MQ=255) tGATCGGCATTCAGCGGCTGGGACATCGTAAACCCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACCTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGaa < 4:2062640/149‑1 (MQ=255) agcGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACa > 2:2043128/3‑149 (MQ=255) cGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACata < 2:2277741/149‑1 (MQ=255) ggCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGttt < 1:71376/131‑1 (MQ=255) gCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATAtt < 4:1308506/149‑1 (MQ=255) cATTCAGCGGCTGGGACATCGTAAACTCCTGTTAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTg > 2:637714/1‑149 (MQ=255) aTTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCa > 1:1423516/1‑123 (MQ=255) aTTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGt > 2:1162520/1‑133 (MQ=255) gCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGc > 3:744206/1‑149 (MQ=255) gCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGc < 3:102265/149‑1 (MQ=255) tGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTAc < 1:1208676/149‑1 (MQ=255) tGGGAAATAGTAAATTCCTGATAGCATTGTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATACACCGTAATCAGGACACAAAAAAACCTGC‑CAGAGCAGGTTTTTTGTTATGGGAACATATTGCCAGGCGGTAc < 4:744206/149‑1 (MQ=255) aTCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCttt < 4:1084321/149‑1 (MQ=255) aTCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCttt < 2:1705645/149‑1 (MQ=255) aaaCTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACg > 4:1016979/1‑149 (MQ=255) cTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCTTCGATAGTCACATCCACCGTAACCAGGACACAAAAAAACCTGC‑CGACGCAGGTGTTTTCTTTTCGGAACATATTGCCTGGCGGTACGGCTTTGAGTGTCt > 4:252842/1‑149 (MQ=255) tCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCtt > 4:1715890/1‑149 (MQ=255) tCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCtt < 1:155164/149‑1 (MQ=255) tCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCtt > 2:300318/1‑149 (MQ=255) cTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGc > 3:1880710/1‑149 (MQ=255) tGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCa < 1:1781395/149‑1 (MQ=255) tGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCa > 4:2417573/1‑149 (MQ=255) tAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGaa > 4:1543820/1‑137 (MQ=255) tAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATa > 4:1650925/1‑149 (MQ=255) tAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATa < 3:408389/149‑1 (MQ=255) cATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGtt < 4:1079615/149‑1 (MQ=255) aTTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTa < 4:1005287/100‑1 (MQ=255) aTTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTa > 1:1121471/1‑149 (MQ=255) aTTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTa < 2:1811564/149‑1 (MQ=255) ttttGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATc < 4:2326936/101‑1 (MQ=255) ttttGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCATTAGTTAt > 2:1360530/1‑149 (MQ=255) ttttGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTAt > 1:2134500/1‑149 (MQ=255) ttttGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTAt > 1:528820/1‑149 (MQ=255) tttGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTAtt < 3:1211701/149‑1 (MQ=255) ttcaaaTCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTAATg < 3:1650925/146‑1 (MQ=255) ttGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTg < 3:1903447/149‑1 (MQ=255) ttGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTg < 3:1715890/149‑1 (MQ=255) gAAAGCCGTTATAGTAGTGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGaa < 4:2407378/149‑1 (MQ=255) ccGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATAc > 2:452547/1‑149 (MQ=255) ccGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTATTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATAc < 1:1904089/149‑1 (MQ=255) tataGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACtttt < 3:142279/149‑1 (MQ=255) tagtagCGACTTCACATCTTCAGCGATAGTTACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCa < 2:1505839/149‑1 (MQ=255) tagtagCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCa < 4:864567/149‑1 (MQ=255) tagCAACTTCACATCTTCAGCGATAGTCACATCCACCGTTATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATGGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGa < 1:1655384/149‑1 (MQ=255) gCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGa < 1:2187677/64‑1 (MQ=255) cGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGAttt < 3:1978009/149‑1 (MQ=255) ttCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGaa < 2:1291552/80‑1 (MQ=255) tCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTgcgc > 1:345860/1‑149 (MQ=255) cacaTCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCa > 1:1331493/1‑149 (MQ=255) acaTCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAg > 3:1479183/1‑149 (MQ=255) acaTCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAg > 3:485334/1‑149 (MQ=255) caTCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGt > 1:2130452/1‑149 (MQ=255) aTCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGAtttt > 1:2018680/1‑141 (MQ=255) aTCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGtt < 3:1518885/149‑1 (MQ=255) aTCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGtt > 3:2208032/1‑149 (MQ=255) cTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTc < 2:934840/149‑1 (MQ=255) ttCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑TCCGGCAGGttttttt > 1:973511/1‑62 (MQ=25) gATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCgg < 1:931737/149‑1 (MQ=255) gATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCgg < 4:2164090/149‑1 (MQ=255) aTAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCt > 1:434678/1‑97 (MQ=255) tCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATAtt > 2:98239/1‑67 (MQ=255) ccACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCa < 1:24714/149‑1 (MQ=255) aCCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCAtt < 4:378793/149‑1 (MQ=255) aCCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCAtt > 4:1872942/1‑149 (MQ=255) ccGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCAttt < 4:1995524/149‑1 (MQ=255) tcaGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTtata < 4:485334/149‑1 (MQ=255) tcaGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTtata > 2:718656/1‑149 (MQ=255) ggACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAg < 1:1048489/149‑1 (MQ=255) ggACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAg > 4:1755160/1‑149 (MQ=255) acacAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGgt < 1:783571/149‑1 (MQ=255) acaAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGgtgt > 4:720098/1‑149 (MQ=255) aaaaaaaCCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGTCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACa < 2:2330795/87‑1 (MQ=255) aaaaaaaCCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACa > 1:2330795/1‑87 (MQ=255) aaaaaaaCCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGtt < 2:1113331/111‑1 (MQ=255) aaaaaaaCCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTa > 4:1459946/1‑149 (MQ=255) aaaaaaaCCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTa > 4:963470/1‑149 (MQ=255) aaaaaaaCATGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTg > 3:1743826/1‑71 (MQ=255) aaaaaaCCTGC‑TCCGGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTa > 2:773517/1‑148 (MQ=255) aaaaaaCCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGaa > 2:2120821/1‑84 (MQ=255) aaaaaaCCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTac > 1:2231314/1‑148 (MQ=255) aaaaaaCCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTAt > 4:160106/1‑149 (MQ=255) aaaaaCCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTGATTGAACATACTTTTCAGGATTTTGCGCGGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTAtt > 1:1960898/1‑149 (MQ=255) gC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCAt > 1:286320/1‑105 (MQ=255) gC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTgc < 4:2460020/149‑1 (MQ=255) | AACCACATCAGAAACCAATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGC‑CGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTT > NC_000913/1987711‑1988007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |