New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4605254 | 79 (1.030) | 3 (0.040) | 3/168 | NT | 4.0% | coding (410/789 nt) | fhuF | ferric iron reductase involved in ferric hydroximate transport |
? | NC_000913 | = 4605268 | 71 (0.980) | coding (396/789 nt) | fhuF | ferric iron reductase involved in ferric hydroximate transport | |||||
Rejected: Frequency below cutoff threshold. |
CAGCGCCTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAATGGTGGCACCATCAGGCCGATA > NC_000913/4605169‑4605367 | cAGCGCCTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCg < 1:1637278/100‑1 (MQ=255) gcCTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGgtt > 2:529717‑M2/1‑96 (MQ=255) ccTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGgtttc > 2:449003‑M2/1‑95 (MQ=255) cTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCg < 1:82791/100‑1 (MQ=255) tGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGt < 2:1987855/100‑1 (MQ=255) ggCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTg < 2:580479/100‑1 (MQ=255) cagATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGaa > 1:1405222/3‑100 (MQ=255) cTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGaa > 1:869752/1‑100 (MQ=255) gATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAAc < 1:1911512/100‑1 (MQ=255) gATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAAc < 1:1911528/100‑1 (MQ=255) aTTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACt > 1:416893/1‑100 (MQ=255) tAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCa > 1:2005079/1‑100 (MQ=255) aCGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGc > 1:125036/1‑100 (MQ=255) cGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCa > 2:1964248/1‑100 (MQ=255) gTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCAt > 1:1256908/1‑100 (MQ=255) tttCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATg < 1:319087/100‑1 (MQ=255) tgtcATGCGATGCTGCGGCGAATGCAGTGTTGCGTTGTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATgg < 2:1806946/97‑1 (MQ=255) ccATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGaa < 2:446282/100‑1 (MQ=255) cATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGaaa > 1:545587/1‑100 (MQ=255) aTTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAAt < 1:727956/100‑1 (MQ=255) ttCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATg < 2:16426/100‑1 (MQ=255) tCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGt < 2:131233/100‑1 (MQ=255) cGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGtt > 1:1135731/1‑100 (MQ=255) gATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAACTGTTc > 1:170732/1‑100 (MQ=255) gATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTc > 2:1400923/1‑100 (MQ=255) aTGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTcc < 1:2052820/100‑1 (MQ=255) aTGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTcc < 1:525059/100‑1 (MQ=255) gctgcGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCgg > 2:1499698/1‑100 (MQ=255) ctgcGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGc < 2:1810084/100‑1 (MQ=255) gcggcgAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGa > 1:892025/1‑100 (MQ=255) gcggcgAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGa > 2:69059/1‑100 (MQ=255) cggcgAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGac > 1:528296/1‑100 (MQ=255) cggcgAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGac > 1:506029/1‑100 (MQ=255) cggcgAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGac > 2:1691290/1‑100 (MQ=255) ggcgAATGTGTTGTTGCGTTTTGATCGTCACACACATCGACCCAGAAACAGGCTACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCg < 1:170296/97‑1 (MQ=255) ggcgAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGaca > 1:1077081/1‑100 (MQ=255) cgAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGAcaca < 2:583443/100‑1 (MQ=255) gAACGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACAt < 2:1569885/100‑1 (MQ=255) aTGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCt > 2:1226714/1‑100 (MQ=255) aTGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCt < 1:1077323/100‑1 (MQ=255) gtgtTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGc < 2:1504828/100‑1 (MQ=255) tgtTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGcc < 1:924138/100‑1 (MQ=255) gtTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGGAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCt > 1:162682/1‑100 (MQ=255) ttGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCtt > 1:1205672/1‑100 (MQ=255) gCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAACGCCtttt > 2:475395/1‑100 (MQ=255) cGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTc > 1:572666/1‑100 (MQ=255) gTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTcc > 1:991909/1‑100 (MQ=255) gTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTcc < 1:1996583/100‑1 (MQ=255) gTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTcc < 2:154399/100‑1 (MQ=255) ttttATCTTCACATACATCGACCGAGAAACAGGCGACGCGCCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTg < 2:555208/100‑1 (MQ=255) ttttATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTg < 2:792549/100‑1 (MQ=255) ttATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCg < 1:1400933/100‑1 (MQ=255) tATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCg < 2:1762880/99‑1 (MQ=255) tATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGt > 2:1634713/1‑100 (MQ=255) tATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGt > 2:982627/1‑100 (MQ=255) tCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCTTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCa < 2:1431596/100‑1 (MQ=255) tCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCa > 1:62980/1‑100 (MQ=255) cTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGgtttctgggtcgatgtgtgtgaagataaaaacgcaacaccacattcgccgcagcatcgaatg < 2:424178‑M2/100‑63 (MQ=255) cTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAg < 2:162679/100‑1 (MQ=255) tCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAGACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGt < 2:826059/99‑1 (MQ=255) tCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTa < 2:1618577/100‑1 (MQ=255) acacacaTCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAgc < 2:1076497/100‑1 (MQ=255) acacacaTCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAgc < 2:154250/100‑1 (MQ=255) acacacaTCGACCCAGAAACAGGCGACGCGTCCGGGTTCGTGAAACTCAGCATGGAAATGGTCAGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAgc > 2:1460390/1‑100 (MQ=255) acaTCGACCCAGAAACAGGCGAGGCGGCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCa < 2:2033143/100‑1 (MQ=255) caTCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAg > 1:4112/1‑100 (MQ=255) caTCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACGCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAg < 2:869749/100‑1 (MQ=255) aTCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGc > 1:1276076/1‑100 (MQ=255) aTCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGc < 1:1691302/100‑1 (MQ=255) tCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACGCATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCa > 2:1808830/1‑100 (MQ=255) gACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCTACTCATCTAATGCCTTTTCCTGCGTCAGTAGCGcc < 2:559903/94‑1 (MQ=255) gACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCTACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCAtt < 2:1135726/100‑1 (MQ=255) aCCCAGAAACAGGCGACGCGTCCGgtttctgggtcgacgtgtgtgaagataaaaacgcaacaccacattcgccgcagcatcgaatggaaacgctaatcag < 2:1109695‑M2/100‑77 (MQ=255) cccAGAAACAGGCGACGCGTCCGgtttctgggtcgatgtgtgtgaagataaaaacgcaacaccacattcgccgcagcatcgaatggaaacgttaatcagc < 1:560482‑M2/100‑78 (MQ=255) gAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAAtggt > 1:1219854/1‑100 (MQ=255) gAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAAtggt > 1:623245/1‑100 (MQ=255) aaCAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAAtggtgg < 1:353290/100‑1 (MQ=255) aCAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAATGGTGGc < 2:1915560/100‑1 (MQ=255) aGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAATGGTGGCAc > 1:246927/1‑100 (MQ=255) ggCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAATGGTGGCAcc < 1:1638883/100‑1 (MQ=255) ggCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAATGGTGGCAcc > 2:1261546/1‑100 (MQ=255) gACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAATGGTGGCACCATc > 2:937375/1‑100 (MQ=255) gTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAATGGTGGCACCATCAGGcc < 2:396732/100‑1 (MQ=255) ccGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTACTGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAATGGTGGCACCATCAGGCCGa > 2:1805815/1‑100 (MQ=255) cGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAATGGTGGCACCATCAGGCCGat > 1:1281056/1‑100 (MQ=255) ggTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAATGGTGGCACCATCAGGCCGata > 1:638698/1‑100 (MQ=255) | CAGCGCCTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACAGGCGACGCGTCCGGTTTCGTGAAACTCAGCATGGAAATGTTCCGGCGACACATCTAATGCCTTTTCCTGCGTCAGTAGCGCCAGCATTAATGGTGGCACCATCAGGCCGATA > NC_000913/4605169‑4605367 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |