BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4638146	87 (0.870)	6 (0.070)	5/156	NT	6.7%	intergenic (+26/‑32)	creC/creD	sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein
*	?	NC_000913	= 4638170	92 (1.050)	6 (0.070)	5/156	NT	6.7%	intergenic (+50/‑8)	creC/creD	sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 117 total aligned reads displayed.

AGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGAT  >  NC_000913/4638071‑4638269

aGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGga                                                                                                      <  1:2552156/100‑1 (MQ=255)

 ggAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAg                                                                                                     <  2:501347‑M2/100‑2 (MQ=255)

 ggAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAg                                                                                                     <  2:1705136‑M2/100‑2 (MQ=255)

        ggCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagacta                                                                                              <  2:1539576‑M2/100‑9 (MQ=255)

           gTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatgt                                                                                           <  1:2608266‑M2/100‑12 (MQ=255)

            tGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAACGGAgaagactatgt                                                                                           <  2:1790776‑M2/99‑12 (MQ=255)

            tGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGATAAGACTATGtt                                                                                          <  2:2109935/100‑1 (MQ=255)

             gCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTg                                                                                         >  2:385374/1‑100 (MQ=255)

             gCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTg                                                                                         <  2:1487879/100‑1 (MQ=255)

               tGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCAATTGCAAAGGAGAAGACTATGTTGaa                                                                                       >  1:398552/1‑100 (MQ=255)

                ggCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGaaa                                                                                      >  1:1916000/1‑100 (MQ=255)

                  ccTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑c                                                                                   >  1:2561358/1‑100 (MQ=255)

                  ccTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑c                                                                                   >  1:2659388/1‑100 (MQ=255)

                      gCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑ccccc                                                                               <  1:1710326/100‑1 (MQ=255)

                       cTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑cccccc                                                                              <  2:2067348/100‑1 (MQ=255)

                       cTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑cccccc                                                                              <  1:806575/100‑1 (MQ=255)

                       cTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑cccccc                                                                              <  2:1125542/100‑1 (MQ=255)

                          cGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGt                                                                           >  2:2111086/1‑100 (MQ=255)

                          cGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGt                                                                           >  2:2737248/1‑100 (MQ=255)

                           gACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGtt                                                                          >  1:978618/1‑100 (MQ=255)

                             cTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCt                                                                        >  2:2662173/1‑100 (MQ=255)

                             cTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCt                                                                        >  1:571148/1‑100 (MQ=255)

                               tCACCGTCACTTCACATAGCTTCAGATTCTTCCCACATAGTCGTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTc                                                                         <  2:2156763/97‑1 (MQ=255)

                               tCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTgg                                                                      <  2:2601682/100‑1 (MQ=255)

                                cACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGa                                                                     >  1:1028739/1‑100 (MQ=255)

                                  ccGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCCTGTTCTGGaa                                                                    >  1:1756372/1‑100 (MQ=255)

                                   cGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGaaaa                                                                  >  2:1537984/1‑100 (MQ=255)

                                    gTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAAt                                                                 <  1:548370/100‑1 (MQ=255)

                                    gTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAAt                                                                 <  1:1705144/100‑1 (MQ=255)

                                     tCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATg                                                                <  2:2727627/100‑1 (MQ=255)

                                      naCTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGa                                                               >  1:661425/2‑100 (MQ=255)

                                       aCTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGAc                                                              >  2:235926/1‑100 (MQ=255)

                                        cTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACt                                                             >  2:1456911/1‑100 (MQ=255)

                                        cTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACt                                                             <  1:2406350/100‑1 (MQ=255)

                                         ttCACATAGCTTCAAATGCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTa                                                            <  2:1148027/100‑1 (MQ=255)

                                           cacaTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGc                                                          >  1:2695504/1‑100 (MQ=255)

                                           cacaTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGc                                                          >  2:471304/1‑100 (MQ=255)

                                            acaTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGcc                                                         <  2:1711583/100‑1 (MQ=255)

                                            acaTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGcc                                                         <  2:98311/100‑1 (MQ=255)

                                                 gCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGttt                                                    >  1:1056681/1‑100 (MQ=255)

                                                 gCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGttt                                                    <  1:1171727/100‑1 (MQ=255)

                                                  cTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTg                                                   >  2:1606803/1‑100 (MQ=255)

                                                  cTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTg                                                   >  1:1853503/1‑100 (MQ=255)

                                                   ttCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGACGACTATGTTGAAAT‑CCCCCATGCTCTGGAAAATGACTAGCCTGttt                                                    >  2:115835/1‑98 (MQ=255)

                                                   ttCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTgg                                                  <  1:2492122/100‑1 (MQ=255)

                                                    tCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGt                                                 <  2:1957927/100‑1 (MQ=255)

                                                    tCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGt                                                 >  2:798402/1‑100 (MQ=255)

                                                     cAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTg                                                >  2:2280489/1‑100 (MQ=255)

                                                      aaaTTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGc                                               >  1:2102927/1‑100 (MQ=255)

                                                       aaTTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCa                                              >  1:2576978/1‑100 (MQ=255)

                                                       aaTTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGGTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGc                                               <  2:1487456/99‑1 (MQ=255)

                                                        aTTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAg                                             <  2:1023612/100‑1 (MQ=255)

                                                            ttcCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatgtgggaagaatttgaagctatgtgaagtgacggtgaagtcgaagcgaggcc                                          <  1:79271‑M2/100‑61 (MQ=255)

                                                             tcCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatgtgggaagaatttgaagctatgtgaagtgacggtgaagtcgaagcgaggcca                                         <  2:388921‑M2/100‑62 (MQ=255)

                                                              cccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatgtgggaagaatttgaagctatgtgaagtgacggtgaagtcgaagcgaggccag                                        <  2:42467‑M2/100‑63 (MQ=255)

                                                              cccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGc                                       >  2:1391760/1‑100 (MQ=255)

                                                              cccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGc                                       <  2:2550388/100‑1 (MQ=255)

                                                              cccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGc                                       <  2:2568555/100‑1 (MQ=255)

                                                               ccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagcctatgtgggaagaatttgacgctatgtgaagtgacggtgaagtcgaagcgaggccagc                                       <  2:1499279‑M2/100‑64 (MQ=255)

                                                               ccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatgtgggaagaatttgaagctatgtgaagtgacggtgaagtcgaagcgaggccagc                                       >  1:388922‑M2/1‑37 (MQ=255)

                                                               ccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCt                                      >  2:1884078/1‑100 (MQ=255)

                                                               ccACATAGTCTTCGTATCCTGATGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCACCTGTTATGGAAAATGACTAGCCTGTTTGGTGCAGTATTgat                                      >  2:899762/1‑98 (MQ=255)

                                                                 acaTAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgt                                    >  2:2005059/1‑100 (MQ=255)

                                                                  caTAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgtt                                   <  2:2143780/100‑1 (MQ=255)

                                                                     aggcTTCGTGTGCTGCTGCCATTGCGAAGGAGAAGGCTATGGTGAGAT‑GCCCCCTGTTCTGGAGAATGACTAGCCTGTTTGGTGCAGTATTGCTggtgtt                                <  2:2688494/97‑1 (MQ=255)

                                                                     aGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTgttgtt                                <  1:2275771/100‑1 (MQ=255)

                                                                        cTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGAt                             <  2:1524025/100‑1 (MQ=255)

                                                                        cTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGAt                             >  1:2643662/1‑100 (MQ=255)

                                                                        cTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGAt                             >  1:693816/1‑100 (MQ=255)

                                                                        cTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGAt                             >  2:2118084/1‑100 (MQ=255)

                                                                        cTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTGGACAT‑CCCCCCTGTTCTGGAAAATAACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGAt                             <  1:484533/100‑1 (MQ=255)

                                                                        cTTCGTATCCTGCTGCAATTGCAAAGTAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGACTGTTTGGTGCAGTATTGCTGTTGTTGAt                             >  2:2191514/1‑100 (MQ=255)

                                                                          tCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGAtt                            >  2:395432/1‑99 (MQ=255)

                                                                          tCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAAAGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGAtt                            >  2:2744442/1‑99 (MQ=255)

                                                                           cGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTcc                          <  1:1589176/100‑1 (MQ=255)

                                                                            gTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCg                         >  1:271670/1‑100 (MQ=255)

                                                                              aTCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGAt                       <  1:1793105/100‑1 (MQ=255)

                                                                               tCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATa                      <  1:195893/100‑1 (MQ=255)

                                                                                ccTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATaa                     >  1:2526212/1‑100 (MQ=255)

                                                                                 ctgctgCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAAt                    >  1:221546/1‑100 (MQ=255)

                                                                                  tgctgcCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATg                   >  1:51352/1‑100 (MQ=255)

                                                                                   gctgcCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGc                  >  1:1637389/1‑100 (MQ=255)

                                                                                   gctgcCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCGGTTGTTGATTCCGATAATGc                  <  2:1675515/100‑1 (MQ=255)

                                                                                    ctgcCATCGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCt                 >  1:1445920/1‑100 (MQ=255)

                                                                                      gcCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGa               <  2:903434/100‑1 (MQ=255)

                                                                                      gcCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGa               >  1:1014102/1‑100 (MQ=255)

                                                                                         aTTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTc            >  2:2283808/1‑100 (MQ=255)

                                                                                            gCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGc         >  1:1226669/1‑100 (MQ=255)

                                                                                            gCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGc         >  1:1370675/1‑100 (MQ=255)

                                                                                            gCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGc         >  2:2323569/1‑100 (MQ=255)

                                                                                            gCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGc         >  2:1192008/1‑100 (MQ=255)

                                                                                            gCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGc         >  2:1191595/1‑100 (MQ=255)

                                                                                             cAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCa        >  1:119678/1‑100 (MQ=255)

                                                                                              aaaGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAg       >  2:827501/1‑100 (MQ=255)

                                                                                               aaGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAgg      <  2:2020331/100‑1 (MQ=255)

                                                                                               aaGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAgg      <  1:2247184/100‑1 (MQ=255)

                                                                                                aGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGt     >  1:1118941/1‑100 (MQ=255)

                                                                                                aGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGt     <  1:2612404/100‑1 (MQ=255)

                                                                                                 ggAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTg    <  1:1444120/100‑1 (MQ=255)

                                                                                                   agaagaCTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGAt  <  1:1335764/100‑1 (MQ=255)

AGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGAT  >  NC_000913/4638071‑4638269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.